RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 PET117Q6UWS5 81 aa15.78■□□□□ 0.12
SHKBP1-225ENST00000600733 Q8N6K4 173 aa15.78■□□□□ 0.12
SHKBP1-225ENST00000600733 PRSS3P2Q8NHM4 247 aa15.78■□□□□ 0.12
SHKBP1-225ENST00000600733 Q8TAT8 98 aa15.78■□□□□ 0.12
SHKBP1-225ENST00000600733 TMEM189A5PLL7 270 aa15.78■□□□□ 0.12
SHKBP1-225ENST00000600733 CTSGP08311 255 aa15.78■□□□□ 0.12
SHKBP1-225ENST00000600733 CCDC144NLQ6NUI1 221 aa15.78■□□□□ 0.12
SHKBP1-225ENST00000600733 EGR2P11161 476 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-225ENST00000600733 PSG9Q00887 426 aa15.77■□□□□ 0.12
SHKBP1-225ENST00000600733 FA2HQ7L5A8 372 aa15.77■□□□□ 0.12
SHKBP1-225ENST00000600733 THYN1Q9P016 225 aa15.77■□□□□ 0.12
SHKBP1-225ENST00000600733 D6R8Y8 96 aa15.77■□□□□ 0.11
SHKBP1-225ENST00000600733 TMEM11P17152 192 aa15.77■□□□□ 0.11
SHKBP1-225ENST00000600733 RPL7P18124 248 aaKnown RBP15.77■□□□□ 0.11
SHKBP1-225ENST00000600733 HLA-DMBP28068 263 aa15.77■□□□□ 0.11
SHKBP1-225ENST00000600733 IFI27P40305 119 aaPredicted RBP15.77■□□□□ 0.11
SHKBP1-225ENST00000600733 RELQ04864 619 aaPredicted RBP15.77■□□□□ 0.11
SHKBP1-225ENST00000600733 ZNF493Q6ZR52 646 aa15.77■□□□□ 0.11
SHKBP1-225ENST00000600733 ORAOV1Q8WV07 137 aa15.77■□□□□ 0.11
SHKBP1-225ENST00000600733 LOC389332A0A1B0GUA5 103 aa15.76■□□□□ 0.11
SHKBP1-225ENST00000600733 HSBP1L1C9JCN9 74 aa15.76■□□□□ 0.11
SHKBP1-225ENST00000600733 MPV17L2Q567V2 206 aa15.76■□□□□ 0.11
SHKBP1-225ENST00000600733 AMN1Q8IY45 258 aa15.76■□□□□ 0.11
SHKBP1-225ENST00000600733 SMAD5-AS1Q9Y6J3 95 aa15.76■□□□□ 0.11
SHKBP1-225ENST00000600733 COX11Q9Y6N1 276 aa15.76■□□□□ 0.11
SHKBP1-225ENST00000600733 IGHV7-81A0A0B4J1V7 117 aa15.75■□□□□ 0.11
SHKBP1-225ENST00000600733 LOXL1Q08397 574 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-225ENST00000600733 PRR25Q96S07 402 aa15.75■□□□□ 0.11
SHKBP1-225ENST00000600733 VGLL1Q99990 258 aa15.75■□□□□ 0.11
SHKBP1-225ENST00000600733 ZNF747Q9BV97 191 aa15.75■□□□□ 0.11
SHKBP1-225ENST00000600733 NDUFS7O75251 213 aa15.75■□□□□ 0.11
SHKBP1-225ENST00000600733 LINC01545Q5VT33 79 aa15.75■□□□□ 0.11
SHKBP1-225ENST00000600733 SLC25A34Q6PIV7 304 aa15.75■□□□□ 0.11
SHKBP1-225ENST00000600733 NCR2O95944 276 aa15.74■□□□□ 0.11
SHKBP1-225ENST00000600733 ZNF80P51504 273 aaPredicted RBP15.74■□□□□ 0.11
SHKBP1-225ENST00000600733 SCRT2Q9NQ03 307 aa15.74■□□□□ 0.11
SHKBP1-225ENST00000600733 RABAC1Q9UI14 185 aa15.74■□□□□ 0.11
SHKBP1-225ENST00000600733 RAXQ9Y2V3 346 aa15.74■□□□□ 0.11
SHKBP1-225ENST00000600733 CCL25O15444 150 aa15.74■□□□□ 0.11
SHKBP1-225ENST00000600733 IGHG4P01861 327 aa15.74■□□□□ 0.11
SHKBP1-225ENST00000600733 OR10AG1Q8NH19 301 aa15.74■□□□□ 0.11
SHKBP1-225ENST00000600733 MSRB2Q9Y3D2 182 aa15.74■□□□□ 0.11
SHKBP1-225ENST00000600733 A0A096LNJ9 63 aa15.73■□□□□ 0.11
SHKBP1-225ENST00000600733 EBI3Q14213 229 aa15.73■□□□□ 0.11
SHKBP1-225ENST00000600733 FAM104BQ5XKR9 115 aa15.73■□□□□ 0.11
SHKBP1-225ENST00000600733 SIGLEC8Q9NYZ4 499 aa15.73■□□□□ 0.11
SHKBP1-225ENST00000600733 A0A1W2PPR1 153 aa15.73■□□□□ 0.11
SHKBP1-225ENST00000600733 C1orf122Q6ZSJ8 110 aa15.73■□□□□ 0.11
SHKBP1-225ENST00000600733 ZNF738Q8NE65 137 aa15.73■□□□□ 0.11
SHKBP1-225ENST00000600733 ZFHX3Q15911 3703 aa15.72■□□□□ 0.11
SHKBP1-225ENST00000600733 SAPCD1Q5SSQ6 148 aa15.72■□□□□ 0.11
SHKBP1-225ENST00000600733 Q8N9W7 124 aa15.72■□□□□ 0.11
SHKBP1-225ENST00000600733 PRELID3AQ96N28 172 aa15.72■□□□□ 0.11
SHKBP1-225ENST00000600733 NUDT3O95989 172 aa15.71■□□□□ 0.11
SHKBP1-225ENST00000600733 PTTG1IPP53801 180 aa15.71■□□□□ 0.11
SHKBP1-225ENST00000600733 KLRB1Q12918 225 aa15.71■□□□□ 0.11
SHKBP1-225ENST00000600733 MINOS1Q5TGZ0 78 aa15.71■□□□□ 0.11
SHKBP1-225ENST00000600733 MINOS1-NBL1R4GNA1 71 aa15.71■□□□□ 0.11
SHKBP1-225ENST00000600733 AKAP6Q13023 2319 aa15.71■□□□□ 0.11
SHKBP1-225ENST00000600733 OOSP1A8MZH6 123 aa15.71■□□□□ 0.11
SHKBP1-225ENST00000600733 GPR183P32249 361 aa15.71■□□□□ 0.11
SHKBP1-225ENST00000600733 FXYD7P58549 80 aa15.71■□□□□ 0.11
SHKBP1-225ENST00000600733 MRPL51Q4U2R6 128 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-225ENST00000600733 COX8CQ7Z4L0 72 aa15.71■□□□□ 0.11
SHKBP1-225ENST00000600733 U3KQK5 164 aa15.71■□□□□ 0.11
SHKBP1-225ENST00000600733 ECSCRQ19T08 205 aa15.7■□□□□ 0.1
SHKBP1-225ENST00000600733 ORMDL3Q8N138 153 aa15.7■□□□□ 0.1
SHKBP1-225ENST00000600733 SMKR1H3BMG3 65 aa15.7■□□□□ 0.1
SHKBP1-225ENST00000600733 C15orf32Q32M92 178 aa15.7■□□□□ 0.1
SHKBP1-225ENST00000600733 ZNF575Q86XF7 245 aa15.7■□□□□ 0.1
SHKBP1-225ENST00000600733 OR8A1Q8NGG7 326 aa15.7■□□□□ 0.1
SHKBP1-225ENST00000600733 SIRPDQ9H106 197 aa15.7■□□□□ 0.1
SHKBP1-225ENST00000600733 TWIST1Q15672 202 aa15.69■□□□□ 0.1
SHKBP1-225ENST00000600733 BVES-AS1Q5T3Y7 98 aa15.69■□□□□ 0.1
SHKBP1-225ENST00000600733 ERASQ7Z444 233 aa15.69■□□□□ 0.1
SHKBP1-225ENST00000600733 DTX2Q86UW9 622 aa15.69■□□□□ 0.1
SHKBP1-225ENST00000600733 FER1L6-AS1Q8NA97 138 aa15.69■□□□□ 0.1
SHKBP1-225ENST00000600733 MS4A6AQ9H2W1 248 aa15.69■□□□□ 0.1
SHKBP1-225ENST00000600733 SCGB2A1O75556 95 aa15.68■□□□□ 0.1
SHKBP1-225ENST00000600733 HIVEP3Q5T1R4 2406 aa15.68■□□□□ 0.1
SHKBP1-225ENST00000600733 ERCC8Q13216 396 aa15.68■□□□□ 0.1
SHKBP1-225ENST00000600733 FOXE3Q13461 319 aa15.68■□□□□ 0.1
SHKBP1-225ENST00000600733 A0A087X0K7 114 aa15.67■□□□□ 0.1
SHKBP1-225ENST00000600733 IGHV3-66A0A0C4DH42 116 aa15.67■□□□□ 0.1
SHKBP1-225ENST00000600733 PRAC2D3DTV9 90 aa15.67■□□□□ 0.1
SHKBP1-225ENST00000600733 UBE2V1Q13404 147 aa15.67■□□□□ 0.1
SHKBP1-225ENST00000600733 PIP4P2Q8N4L2 257 aa15.67■□□□□ 0.1
SHKBP1-225ENST00000600733 RNF182Q8N6D2 247 aa15.67■□□□□ 0.1
SHKBP1-225ENST00000600733 ZNF502Q8TBZ5 544 aa15.67■□□□□ 0.1
SHKBP1-225ENST00000600733 AJUBAQ96IF1 538 aa15.67■□□□□ 0.1
SHKBP1-225ENST00000600733 ATP6V0E1O15342 81 aa15.66■□□□□ 0.1
SHKBP1-225ENST00000600733 SNAI2O43623 268 aa15.66■□□□□ 0.1
SHKBP1-225ENST00000600733 CLEC3BP05452 202 aa15.66■□□□□ 0.1
SHKBP1-225ENST00000600733 BMI1P35226 326 aa15.66■□□□□ 0.1
SHKBP1-225ENST00000600733 RHOGP84095 191 aa15.66■□□□□ 0.1
SHKBP1-225ENST00000600733 ARL6IP6Q8N6S5 226 aa15.66■□□□□ 0.1
SHKBP1-225ENST00000600733 MSRB1Q9NZV6 116 aa15.66■□□□□ 0.1
SHKBP1-225ENST00000600733 NPYP01303 97 aa15.66■□□□□ 0.1
SHKBP1-225ENST00000600733 ORM1P02763 201 aa15.66■□□□□ 0.1
SHKBP1-225ENST00000600733 IGLC6P0CF74 106 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms