RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 Q8TAT8 98 aa12.74□□□□□ -0.37
SYDE1-204ENST00000600440 RNF183Q96D59 192 aa12.74□□□□□ -0.37
SYDE1-204ENST00000600440 K7ESF4 209 aa12.74□□□□□ -0.37
SYDE1-204ENST00000600440 CNTFRP26992 372 aa12.74□□□□□ -0.37
SYDE1-204ENST00000600440 ODF1Q14990 250 aa12.74□□□□□ -0.37
SYDE1-204ENST00000600440 C8orf86Q6ZUL3 223 aa12.73□□□□□ -0.37
SYDE1-204ENST00000600440 IGFL4Q6B9Z1 124 aa12.73□□□□□ -0.37
SYDE1-204ENST00000600440 HHLA3Q9XRX5 114 aa12.73□□□□□ -0.37
SYDE1-204ENST00000600440 CACNA1HO95180 2353 aa12.73□□□□□ -0.37
SYDE1-204ENST00000600440 CCL8P80075 99 aa12.73□□□□□ -0.37
SYDE1-204ENST00000600440 TCTEX1D4Q5JR98 221 aa12.73□□□□□ -0.37
SYDE1-204ENST00000600440 TTC9CQ8N5M4 171 aa12.73□□□□□ -0.37
SYDE1-204ENST00000600440 MAFAQ8NHW3 353 aaPredicted RBP12.73□□□□□ -0.37
SYDE1-204ENST00000600440 TMEM167AQ8TBQ9 72 aa12.73□□□□□ -0.37
SYDE1-204ENST00000600440 TMEM158Q8WZ71 300 aa12.73□□□□□ -0.37
SYDE1-204ENST00000600440 GAFA1Q96PS6 74 aa12.73□□□□□ -0.37
SYDE1-204ENST00000600440 CYSLTR1Q9Y271 337 aa12.73□□□□□ -0.37
SYDE1-204ENST00000600440 IGKV2-40A0A087WW87 121 aaPredicted RBP12.72□□□□□ -0.37
SYDE1-204ENST00000600440 IGKV2D-40P01614 121 aaPredicted RBP12.72□□□□□ -0.37
SYDE1-204ENST00000600440 FER1L6-AS2Q96M78 137 aa12.72□□□□□ -0.37
SYDE1-204ENST00000600440 RASL11BQ9BPW5 248 aa12.72□□□□□ -0.37
SYDE1-204ENST00000600440 MAP1LC3AQ9H492 121 aa12.72□□□□□ -0.37
SYDE1-204ENST00000600440 MRPL35Q9NZE8 188 aaKnown RBP12.72□□□□□ -0.37
SYDE1-204ENST00000600440 RNF7Q9UBF6 113 aa12.72□□□□□ -0.37
SYDE1-204ENST00000600440 SH2D1AO60880 128 aa12.72□□□□□ -0.37
SYDE1-204ENST00000600440 VMA21Q3ZAQ7 101 aa12.72□□□□□ -0.37
SYDE1-204ENST00000600440 TRGV9Q99603 122 aa12.72□□□□□ -0.37
SYDE1-204ENST00000600440 KLK15Q9H2R5 256 aa12.72□□□□□ -0.37
SYDE1-204ENST00000600440 TNFAIP6P98066 277 aaPredicted RBP12.71□□□□□ -0.37
SYDE1-204ENST00000600440 KLF17Q5JT82 389 aaPredicted RBP12.71□□□□□ -0.37
SYDE1-204ENST00000600440 MALRD1Q5VYJ5 2156 aa12.71□□□□□ -0.37
SYDE1-204ENST00000600440 DPM2O94777 84 aa12.71□□□□□ -0.38
SYDE1-204ENST00000600440 ORM1P02763 201 aa12.71□□□□□ -0.38
SYDE1-204ENST00000600440 PSMB2P49721 201 aa12.71□□□□□ -0.38
SYDE1-204ENST00000600440 C9orf106Q8NAJ2 232 aa12.71□□□□□ -0.38
SYDE1-204ENST00000600440 RPL27AP46776 148 aaKnown RBP12.7□□□□□ -0.38
SYDE1-204ENST00000600440 NGBQ9NPG2 151 aa12.7□□□□□ -0.38
SYDE1-204ENST00000600440 RALYQ9UKM9 306 aaKnown RBP12.7□□□□□ -0.38
SYDE1-204ENST00000600440 ZZEF1O43149 2961 aa12.7□□□□□ -0.38
SYDE1-204ENST00000600440 A0A1B0GW15 77 aa12.7□□□□□ -0.38
SYDE1-204ENST00000600440 H3BVH4 76 aa12.7□□□□□ -0.38
SYDE1-204ENST00000600440 PGPEP1Q9NXJ5 209 aa12.7□□□□□ -0.38
SYDE1-204ENST00000600440 ZNF833PQ6ZTB9 187 aa12.7□□□□□ -0.38
SYDE1-204ENST00000600440 ZNF576Q9H609 170 aa12.7□□□□□ -0.38
SYDE1-204ENST00000600440 RAI1Q7Z5J4 1906 aaPredicted RBP12.69□□□□□ -0.38
SYDE1-204ENST00000600440 IGHV3OR16-8A0A075B7F1 116 aa12.69□□□□□ -0.38
SYDE1-204ENST00000600440 XGP55808 180 aa12.69□□□□□ -0.38
SYDE1-204ENST00000600440 FOXI1Q12951 378 aa12.69□□□□□ -0.38
SYDE1-204ENST00000600440 RRN3P1Q2M238 152 aa12.69□□□□□ -0.38
SYDE1-204ENST00000600440 ANAPC13Q9BS18 74 aa12.69□□□□□ -0.38
SYDE1-204ENST00000600440 TM2D2Q9BX73 214 aa12.69□□□□□ -0.38
SYDE1-204ENST00000600440 HIGD1BQ9P298 99 aa12.69□□□□□ -0.38
SYDE1-204ENST00000600440 TRBV19A0A075B6N1 114 aa12.68□□□□□ -0.38
SYDE1-204ENST00000600440 LINC01548A6NM66 108 aa12.68□□□□□ -0.38
SYDE1-204ENST00000600440 MED13LQ71F56 2210 aa12.68□□□□□ -0.38
SYDE1-204ENST00000600440 IL4P05112 153 aa12.68□□□□□ -0.38
SYDE1-204ENST00000600440 PLGLAQ15195 96 aa12.68□□□□□ -0.38
SYDE1-204ENST00000600440 Q6AWC8 147 aa12.68□□□□□ -0.38
SYDE1-204ENST00000600440 B5MCH6 92 aa12.68□□□□□ -0.38
SYDE1-204ENST00000600440 ZNF493Q6ZR52 646 aa12.68□□□□□ -0.38
SYDE1-204ENST00000600440 RPEQ96AT9 228 aa12.68□□□□□ -0.38
SYDE1-204ENST00000600440 SCNM1Q9BWG6 230 aa12.68□□□□□ -0.38
SYDE1-204ENST00000600440 EGR2P11161 476 aaPredicted RBP12.67□□□□□ -0.38
SYDE1-204ENST00000600440 EFNA4P52798 201 aa12.67□□□□□ -0.38
SYDE1-204ENST00000600440 NFE4Q86UQ8 179 aa12.67□□□□□ -0.38
SYDE1-204ENST00000600440 IGLV2-23P01705 113 aa12.67□□□□□ -0.38
SYDE1-204ENST00000600440 FHL3Q13643 280 aa12.67□□□□□ -0.38
SYDE1-204ENST00000600440 SIGLEC15Q6ZMC9 328 aa12.67□□□□□ -0.38
SYDE1-204ENST00000600440 ZNF502Q8TBZ5 544 aa12.67□□□□□ -0.38
SYDE1-204ENST00000600440 CDIP1Q9H305 208 aa12.67□□□□□ -0.38
SYDE1-204ENST00000600440 TNFRSF6BO95407 300 aa12.66□□□□□ -0.38
SYDE1-204ENST00000600440 LHBP01229 141 aa12.66□□□□□ -0.38
SYDE1-204ENST00000600440 AAMDCQ9H7C9 122 aa12.66□□□□□ -0.38
SYDE1-204ENST00000600440 TRAV26-2A0A0B4J265 109 aa12.66□□□□□ -0.38
SYDE1-204ENST00000600440 PRSS29PA6NIE9 313 aa12.66□□□□□ -0.38
SYDE1-204ENST00000600440 PRO0461Q9UI25 63 aa12.66□□□□□ -0.38
SYDE1-204ENST00000600440 ADGRG4Q8IZF6 3080 aa12.66□□□□□ -0.38
SYDE1-204ENST00000600440 NCBP2LA6PVI3 153 aaKnown RBP12.65□□□□□ -0.38
SYDE1-204ENST00000600440 PAX8Q06710 450 aa12.65□□□□□ -0.38
SYDE1-204ENST00000600440 Q6ZUT4 128 aa12.65□□□□□ -0.38
SYDE1-204ENST00000600440 SIT1Q9Y3P8 196 aa12.65□□□□□ -0.38
SYDE1-204ENST00000600440 PROCRQ9UNN8 238 aa12.65□□□□□ -0.38
SYDE1-204ENST00000600440 UFC1Q9Y3C8 167 aa12.65□□□□□ -0.38
SYDE1-204ENST00000600440 U3KQK5 164 aa12.65□□□□□ -0.38
SYDE1-204ENST00000600440 IGHV3-35A0A0C4DH35 117 aa12.65□□□□□ -0.38
SYDE1-204ENST00000600440 LINC01549A6NIU2 74 aa12.65□□□□□ -0.38
SYDE1-204ENST00000600440 FAM90A27PA6NNH2 459 aa12.65□□□□□ -0.38
SYDE1-204ENST00000600440 PMS2CLQ68D20 193 aa12.65□□□□□ -0.38
SYDE1-204ENST00000600440 ZFP2Q6ZN57 461 aa12.65□□□□□ -0.38
SYDE1-204ENST00000600440 MDS2Q8NDY4 140 aa12.65□□□□□ -0.38
SYDE1-204ENST00000600440 C1QTNF4Q9BXJ3 329 aa12.65□□□□□ -0.38
SYDE1-204ENST00000600440 FBXL15Q9H469 300 aa12.65□□□□□ -0.38
SYDE1-204ENST00000600440 LINC00312Q9Y6C7 94 aa12.65□□□□□ -0.38
SYDE1-204ENST00000600440 TMEM200BQ69YZ2 307 aa12.64□□□□□ -0.39
SYDE1-204ENST00000600440 HOXA3O43365 443 aaPredicted RBP12.64□□□□□ -0.39
SYDE1-204ENST00000600440 CRYGCP07315 174 aa12.64□□□□□ -0.39
SYDE1-204ENST00000600440 ZNF80P51504 273 aaPredicted RBP12.64□□□□□ -0.39
SYDE1-204ENST00000600440 ZNF71Q9NQZ8 489 aaPredicted RBP12.64□□□□□ -0.39
SYDE1-204ENST00000600440 CNIH1O95406 144 aa12.63□□□□□ -0.39
SYDE1-204ENST00000600440 HLA-DMBP28068 263 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms