RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 IGHV1-24A0A0C4DH33 117 aa9.82□□□□□ -0.84
USHBP1-207ENST00000597928 M0R381 172 aa9.82□□□□□ -0.84
USHBP1-207ENST00000597928 SFTA2Q6UW10 78 aa9.82□□□□□ -0.84
USHBP1-207ENST00000597928 PPP1R14DQ9NXH3 145 aa9.82□□□□□ -0.84
USHBP1-207ENST00000597928 MSRB1Q9NZV6 116 aa9.82□□□□□ -0.84
USHBP1-207ENST00000597928 RABAC1Q9UI14 185 aa9.82□□□□□ -0.84
USHBP1-207ENST00000597928 TRAV9-1A0A075B6T8 112 aa9.82□□□□□ -0.84
USHBP1-207ENST00000597928 KIR2DL5BA0A0G2JN68 375 aa9.82□□□□□ -0.84
USHBP1-207ENST00000597928 KIR2DL5BA0A0G2JPC4 375 aa9.82□□□□□ -0.84
USHBP1-207ENST00000597928 CEACAM4O75871 244 aa9.82□□□□□ -0.84
USHBP1-207ENST00000597928 RHOGP84095 191 aa9.82□□□□□ -0.84
USHBP1-207ENST00000597928 SPANXN1Q5VSR9 72 aa9.82□□□□□ -0.84
USHBP1-207ENST00000597928 KIR2DL5AQ8N109 375 aa9.82□□□□□ -0.84
USHBP1-207ENST00000597928 RAI1Q7Z5J4 1906 aaPredicted RBP9.81□□□□□ -0.84
USHBP1-207ENST00000597928 PAX1P15863 534 aa9.81□□□□□ -0.84
USHBP1-207ENST00000597928 VGLL1Q99990 258 aa9.81□□□□□ -0.84
USHBP1-207ENST00000597928 HSPB8Q9UJY1 196 aa9.81□□□□□ -0.84
USHBP1-207ENST00000597928 CUBNO60494 3623 aa9.81□□□□□ -0.84
USHBP1-207ENST00000597928 PF4V1P10720 104 aa9.81□□□□□ -0.84
USHBP1-207ENST00000597928 KHDC1LQ5JSQ8 128 aa9.81□□□□□ -0.84
USHBP1-207ENST00000597928 SMIM15Q7Z3B0 74 aa9.81□□□□□ -0.84
USHBP1-207ENST00000597928 LY96Q9Y6Y9 160 aa9.81□□□□□ -0.84
USHBP1-207ENST00000597928 SYS1-DBNDD2H3BUS1 97 aa9.81□□□□□ -0.84
USHBP1-207ENST00000597928 GATA1P15976 413 aaPredicted RBP9.81□□□□□ -0.84
USHBP1-207ENST00000597928 C20orf144Q9BQM9 153 aa9.81□□□□□ -0.84
USHBP1-207ENST00000597928 TOMM40O96008 361 aa9.8□□□□□ -0.84
USHBP1-207ENST00000597928 ATP5IP56385 69 aaPredicted RBP9.8□□□□□ -0.84
USHBP1-207ENST00000597928 LDLRAD2Q5SZI1 272 aa9.8□□□□□ -0.84
USHBP1-207ENST00000597928 MAPK1IP1LQ8NDC0 245 aa9.8□□□□□ -0.84
USHBP1-207ENST00000597928 C16orf92Q96LL3 132 aa9.8□□□□□ -0.84
USHBP1-207ENST00000597928 F5H697 171 aa9.8□□□□□ -0.84
USHBP1-207ENST00000597928 GCSHP23434 173 aa9.8□□□□□ -0.84
USHBP1-207ENST00000597928 C5orf64Q2M2E5 130 aa9.8□□□□□ -0.84
USHBP1-207ENST00000597928 OR10AG1Q8NH19 301 aa9.8□□□□□ -0.84
USHBP1-207ENST00000597928 VKORC1Q9BQB6 163 aa9.8□□□□□ -0.84
USHBP1-207ENST00000597928 EPG5Q9HCE0 2579 aa9.8□□□□□ -0.84
USHBP1-207ENST00000597928 SH2D1AO60880 128 aa9.8□□□□□ -0.84
USHBP1-207ENST00000597928 FAM71F2Q6NXP2 309 aa9.8□□□□□ -0.84
USHBP1-207ENST00000597928 TTTY13Q9BZ97 58 aa9.8□□□□□ -0.84
USHBP1-207ENST00000597928 TMEM160Q9NX00 188 aa9.8□□□□□ -0.84
USHBP1-207ENST00000597928 PKD1L2Q7Z442 2459 aa9.8□□□□□ -0.84
USHBP1-207ENST00000597928 PTPRBP23467 1997 aa9.79□□□□□ -0.84
USHBP1-207ENST00000597928 TRAV8-6A0A0B4J262 113 aa9.79□□□□□ -0.84
USHBP1-207ENST00000597928 GP9P14770 177 aa9.79□□□□□ -0.84
USHBP1-207ENST00000597928 LOXL1Q08397 574 aaPredicted RBP9.79□□□□□ -0.84
USHBP1-207ENST00000597928 TMEM249Q2WGJ8 235 aa9.79□□□□□ -0.84
USHBP1-207ENST00000597928 AMMECR1LQ6DCA0 310 aa9.79□□□□□ -0.84
USHBP1-207ENST00000597928 TNRC6BQ9UPQ9 1833 aaKnown RBP9.79□□□□□ -0.84
USHBP1-207ENST00000597928 TRAV26-2A0A0B4J265 109 aa9.79□□□□□ -0.84
USHBP1-207ENST00000597928 SPATA12Q7Z6I5 190 aa9.79□□□□□ -0.84
USHBP1-207ENST00000597928 S100A7AQ86SG5 101 aa9.79□□□□□ -0.84
USHBP1-207ENST00000597928 ZNF491Q8N8L2 437 aa9.79□□□□□ -0.84
USHBP1-207ENST00000597928 TRBV19A0A075B6N1 114 aa9.79□□□□□ -0.84
USHBP1-207ENST00000597928 TMEM30BQ3MIR4 351 aa9.79□□□□□ -0.84
USHBP1-207ENST00000597928 FER1L6-AS1Q8NA97 138 aa9.79□□□□□ -0.84
USHBP1-207ENST00000597928 BPESC1Q9GZL8 116 aa9.79□□□□□ -0.84
USHBP1-207ENST00000597928 DCHS2Q6V1P9 2916 aa9.78□□□□□ -0.84
USHBP1-207ENST00000597928 TEX22C9J3V5 150 aa9.78□□□□□ -0.84
USHBP1-207ENST00000597928 GOSR1O95249 250 aa9.78□□□□□ -0.84
USHBP1-207ENST00000597928 RPL7P18124 248 aaKnown RBP9.78□□□□□ -0.84
USHBP1-207ENST00000597928 DYNAPQ8N1N2 210 aa9.78□□□□□ -0.84
USHBP1-207ENST00000597928 LINC01548A6NM66 108 aa9.78□□□□□ -0.84
USHBP1-207ENST00000597928 K7EIM0 57 aa9.78□□□□□ -0.84
USHBP1-207ENST00000597928 FAM162BQ5T6X4 162 aa9.78□□□□□ -0.84
USHBP1-207ENST00000597928 FNDC10F2Z333 226 aa9.77□□□□□ -0.85
USHBP1-207ENST00000597928 RPL24P83731 157 aaKnown RBP9.77□□□□□ -0.85
USHBP1-207ENST00000597928 PSG3Q16557 428 aa9.77□□□□□ -0.85
USHBP1-207ENST00000597928 SHANK2-AS3Q9BTD1 123 aa9.77□□□□□ -0.85
USHBP1-207ENST00000597928 CBY1Q9Y3M2 126 aa9.77□□□□□ -0.85
USHBP1-207ENST00000597928 TMEM78Q5T7P6 136 aa9.77□□□□□ -0.85
USHBP1-207ENST00000597928 THAP8Q8NA92 274 aa9.77□□□□□ -0.85
USHBP1-207ENST00000597928 DUX5Q96PT3 197 aa9.77□□□□□ -0.85
USHBP1-207ENST00000597928 MBD6Q96DN6 1003 aa9.76□□□□□ -0.85
USHBP1-207ENST00000597928 ZNF414Q96IQ9 312 aa9.76□□□□□ -0.85
USHBP1-207ENST00000597928 IGLV1-47P01700 117 aa9.76□□□□□ -0.85
USHBP1-207ENST00000597928 CCDC144NLQ6NUI1 221 aa9.76□□□□□ -0.85
USHBP1-207ENST00000597928 PRAC2D3DTV9 90 aa9.76□□□□□ -0.85
USHBP1-207ENST00000597928 ATP6V0E1O15342 81 aa9.76□□□□□ -0.85
USHBP1-207ENST00000597928 TRGV3P03979 118 aa9.76□□□□□ -0.85
USHBP1-207ENST00000597928 SAA4P35542 130 aa9.76□□□□□ -0.85
USHBP1-207ENST00000597928 LEPP41159 167 aa9.76□□□□□ -0.85
USHBP1-207ENST00000597928 HIST1H1AQ02539 215 aaPredicted RBP9.76□□□□□ -0.85
USHBP1-207ENST00000597928 ORMDL3Q8N138 153 aa9.76□□□□□ -0.85
USHBP1-207ENST00000597928 ARL6IP6Q8N6S5 226 aa9.76□□□□□ -0.85
USHBP1-207ENST00000597928 FOXC2Q99958 501 aa9.76□□□□□ -0.85
USHBP1-207ENST00000597928 SOX21Q9Y651 276 aaPredicted RBP9.76□□□□□ -0.85
USHBP1-207ENST00000597928 ACANP16112 2415 aa9.76□□□□□ -0.85
USHBP1-207ENST00000597928 I3L2K1 104 aa9.75□□□□□ -0.85
USHBP1-207ENST00000597928 ZFP36P26651 326 aaKnown RBP9.75□□□□□ -0.85
USHBP1-207ENST00000597928 IL17RELQ6ZVW7 336 aa9.75□□□□□ -0.85
USHBP1-207ENST00000597928 C1RLQ9NZP8 487 aa9.75□□□□□ -0.85
USHBP1-207ENST00000597928 ZFP30Q9Y2G7 519 aa9.75□□□□□ -0.85
USHBP1-207ENST00000597928 TRAV40A0A0B4J280 105 aa9.75□□□□□ -0.85
USHBP1-207ENST00000597928 A1L4Q6 167 aa9.75□□□□□ -0.85
USHBP1-207ENST00000597928 PSMB11A5LHX3 300 aa9.75□□□□□ -0.85
USHBP1-207ENST00000597928 H3BUT2 72 aa9.75□□□□□ -0.85
USHBP1-207ENST00000597928 DLX6P56179 175 aa9.75□□□□□ -0.85
USHBP1-207ENST00000597928 FAM74A4Q5TZK3 123 aa9.75□□□□□ -0.85
USHBP1-207ENST00000597928 JMJD1CQ15652 2540 aa9.75□□□□□ -0.85
USHBP1-207ENST00000597928 H3BVH4 76 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms