RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, human

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VMP1-215	ENST00000592619	C15orf40	Q8WUR7	153 aa		4.25	□□□□□ -1.73
VMP1-215	ENST00000592619	KCNS1	Q96KK3	526 aa		4.25	□□□□□ -1.73
VMP1-215	ENST00000592619	ERMAP	Q96PL5	475 aa	Predicted RBP	4.25	□□□□□ -1.73
VMP1-215	ENST00000592619	MIEN1	Q9BRT3	115 aa		4.25	□□□□□ -1.73
VMP1-215	ENST00000592619	REG4	Q9BYZ8	158 aa		4.25	□□□□□ -1.73
VMP1-215	ENST00000592619	CBLN4	Q9NTU7	201 aa		4.25	□□□□□ -1.73
VMP1-215	ENST00000592619	BOD1L1	Q8NFC6	3051 aa		4.25	□□□□□ -1.73
VMP1-215	ENST00000592619	MGA	Q8IWI9	3026 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	IGKV3D-11	A0A0A0MRZ8	115 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	IGHV1-45	A0A0A0MS14	117 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	ZNF860	A6NHJ4	632 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	CCDC179	H3BU77	68 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619		M0R381	172 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	ZNF861P	O60384	105 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	TRGC2	P03986	189 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	CD2	P06729	351 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	OR5AC1	P0C628	307 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	COX6A1	P12074	109 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	FOXA3	P55318	350 aa	Predicted RBP	4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	EIF5A	P63241	154 aa	Known RBP	4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	DEFB109B	Q30KR1	87 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619		Q5BKY6	102 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	FAM74A1	Q5RGS3	127 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	EIF5AL1	Q6IS14	154 aa	Known RBP	4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	RPS27L	Q71UM5	84 aa	Known RBP	4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	PRNT	Q86SH4	94 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	ZNF429	Q86V71	674 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	C1orf174	Q8IYL3	243 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	C3orf22	Q8N5N4	141 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	ZDHHC22	Q8N966	263 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	OR10AC1	Q8NH08	325 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	TWIST2	Q8WVJ9	160 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	ZNF799	Q96GE5	643 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	CCL13	Q99616	98 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	NAA38	Q9BRA0	125 aa	Known RBP	4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	C11orf68	Q9H3H3	251 aa	Known RBP	4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	FUT9	Q9Y231	359 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	ACACA	Q13085	2346 aa		4.24	□□□□□ -1.73
VMP1-215	ENST00000592619	PKD1L2	Q7Z442	2459 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	URB1	O60287	2271 aa	Known RBP	4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	IGKV1-27	A0A075B6S5	117 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619		A8MUN3	132 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	LST1	O00453	97 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	CTSD	P07339	412 aa	Predicted RBP	4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	SPTB	P11277	2137 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	ZNF93	P35789	620 aa	Predicted RBP	4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	UBA52	P62987	128 aa	Known RBP	4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	ZNF846	Q147U1	533 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	COMMD6	Q7Z4G1	85 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	TEX29	Q8N6K0	151 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	MRPL30	Q8TCC3	161 aa	Known RBP	4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	S100Z	Q8WXG8	99 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	SLC25A46	Q96AG3	418 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	TOMM6	Q96B49	74 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	YPEL4	Q96NS1	127 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	SPIN2A	Q99865	258 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	SPIN2B	Q9BPZ2	258 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	GINS4	Q9BRT9	223 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	TMEM243	Q9BU79	118 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	DUSP21	Q9H596	190 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	COMMD3	Q9UBI1	195 aa		4.23	□□□□□ -1.73
VMP1-215	ENST00000592619	CPAMD8	Q8IZJ3	1885 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	AHCTF1	Q8WYP5	2266 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	TRAV9-1	A0A075B6T8	112 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619		A0A1B0GVY2	172 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	LGALS9	O00182	355 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	OR2T1	O43869	369 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	COX7A2P2	O60397	106 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	SPINK8	P0C7L1	97 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	NMU	P48645	174 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	AKR1C2	P52895	323 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	FOXA1	P55317	472 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	QRFP	P83859	136 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	CATR1	Q13166	79 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	LYPD2	Q6UXB3	125 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	ZCCHC23	Q6ZST2	131 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	SSX8	Q7RTT4	187 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	RPS19BP1	Q86WX3	136 aa	Known RBP	4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	MORN4	Q8NDC4	146 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	FDCSP	Q8NFU4	85 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	OR2T10	Q8NGZ9	312 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	SGMS2	Q8NHU3	365 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	TSLP	Q969D9	159 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	ABHD14B	Q96IU4	210 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	ADAT1	Q9BUB4	502 aa	Known RBP	4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	DPY30	Q9C005	99 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	WDR61	Q9GZS3	305 aa	Known RBP	4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	DNAJC15	Q9Y5T4	150 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	EPG5	Q9HCE0	2579 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	SCN3A	Q9NY46	2000 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	CCDC88C	Q9P219	2028 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	PTPRQ	Q9UMZ3	2332 aa		4.22	□□□□□ -1.73
VMP1-215	ENST00000592619	KALRN	O60229	2985 aa		4.21	□□□□□ -1.74
VMP1-215	ENST00000592619	TRBV20OR9-2	A0A075B6H5	130 aa		4.21	□□□□□ -1.74
VMP1-215	ENST00000592619	IGHV1-58	A0A0C4DH39	117 aa		4.21	□□□□□ -1.74
VMP1-215	ENST00000592619		A0A1W2PRS3	328 aa		4.21	□□□□□ -1.74
VMP1-215	ENST00000592619	IRGM	A1A4Y4	181 aa		4.21	□□□□□ -1.74
VMP1-215	ENST00000592619	DPRX	A6NFQ7	191 aa		4.21	□□□□□ -1.74
VMP1-215	ENST00000592619		A8MU10	97 aa		4.21	□□□□□ -1.74
VMP1-215	ENST00000592619	PANO1	I0J062	215 aa		4.21	□□□□□ -1.74

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