RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 TM4SF20Q53R12 229 aa14.09□□□□□ -0.15
SPC24-206ENST00000592540 PIFOQ8TCI5 191 aa14.09□□□□□ -0.15
SPC24-206ENST00000592540 RNASE6Q93091 150 aaKnown RBP14.09□□□□□ -0.15
SPC24-206ENST00000592540 EGR2P11161 476 aaPredicted RBP14.08□□□□□ -0.16
SPC24-206ENST00000592540 SAMD5Q5TGI4 173 aa14.08□□□□□ -0.16
SPC24-206ENST00000592540 RPEQ96AT9 228 aa14.08□□□□□ -0.16
SPC24-206ENST00000592540 COX8CQ7Z4L0 72 aa14.08□□□□□ -0.16
SPC24-206ENST00000592540 C18orf15Q96N68 181 aa14.08□□□□□ -0.16
SPC24-206ENST00000592540 IGKV2-40A0A087WW87 121 aaPredicted RBP14.07□□□□□ -0.16
SPC24-206ENST00000592540 IGKV2D-40P01614 121 aaPredicted RBP14.07□□□□□ -0.16
SPC24-206ENST00000592540 COX7A1P24310 79 aa14.07□□□□□ -0.16
SPC24-206ENST00000592540 IGFL3Q6UXB1 125 aa14.07□□□□□ -0.16
SPC24-206ENST00000592540 PRR25Q96S07 402 aa14.07□□□□□ -0.16
SPC24-206ENST00000592540 S4R3C0 116 aa14.07□□□□□ -0.16
SPC24-206ENST00000592540 SMIM17P0DL12 118 aa14.07□□□□□ -0.16
SPC24-206ENST00000592540 FAM57AQ8TBR7 257 aa14.07□□□□□ -0.16
SPC24-206ENST00000592540 RALYQ9UKM9 306 aaKnown RBP14.07□□□□□ -0.16
SPC24-206ENST00000592540 CEP250Q9BV73 2442 aa14.06□□□□□ -0.16
SPC24-206ENST00000592540 IGKV2D-26A0A0A0MRZ7 120 aa14.06□□□□□ -0.16
SPC24-206ENST00000592540 A0A1W2PRD5 423 aa14.06□□□□□ -0.16
SPC24-206ENST00000592540 A0A1W2PRF3 423 aa14.06□□□□□ -0.16
SPC24-206ENST00000592540 A0A1W2PRM7 423 aa14.06□□□□□ -0.16
SPC24-206ENST00000592540 GCSHP23434 173 aa14.06□□□□□ -0.16
SPC24-206ENST00000592540 Q6ZS92 163 aa14.06□□□□□ -0.16
SPC24-206ENST00000592540 RNF5Q99942 180 aa14.06□□□□□ -0.16
SPC24-206ENST00000592540 DYNLRB1Q9NP97 96 aa14.06□□□□□ -0.16
SPC24-206ENST00000592540 HIGD1BQ9P298 99 aa14.06□□□□□ -0.16
SPC24-206ENST00000592540 FBLL1A6NHQ2 334 aaKnown RBP14.06□□□□□ -0.16
SPC24-206ENST00000592540 IGLC6P0CF74 106 aa14.06□□□□□ -0.16
SPC24-206ENST00000592540 FXYD2P54710 66 aa14.06□□□□□ -0.16
SPC24-206ENST00000592540 S100A7AQ86SG5 101 aa14.06□□□□□ -0.16
SPC24-206ENST00000592540 MAP1LC3AQ9H492 121 aa14.06□□□□□ -0.16
SPC24-206ENST00000592540 ZMAT4Q9H898 229 aa14.06□□□□□ -0.16
SPC24-206ENST00000592540 A0A0G2JNJ9 132 aa14.05□□□□□ -0.16
SPC24-206ENST00000592540 ZNF80P51504 273 aaPredicted RBP14.05□□□□□ -0.16
SPC24-206ENST00000592540 ODF1Q14990 250 aa14.05□□□□□ -0.16
SPC24-206ENST00000592540 KLF17Q5JT82 389 aaPredicted RBP14.05□□□□□ -0.16
SPC24-206ENST00000592540 RAB1BQ9H0U4 201 aa14.05□□□□□ -0.16
SPC24-206ENST00000592540 Q9UFV3 132 aa14.05□□□□□ -0.16
SPC24-206ENST00000592540 HHLA3Q9XRX5 114 aa14.05□□□□□ -0.16
SPC24-206ENST00000592540 LINC01546A6NGU7 62 aa14.04□□□□□ -0.16
SPC24-206ENST00000592540 SHISA9B4DS77 424 aa14.04□□□□□ -0.16
SPC24-206ENST00000592540 GNG7O60262 68 aa14.04□□□□□ -0.16
SPC24-206ENST00000592540 FTH1P19P0C7X4 201 aa14.04□□□□□ -0.16
SPC24-206ENST00000592540 PSMG4Q5JS54 123 aa14.04□□□□□ -0.16
SPC24-206ENST00000592540 GFRALQ6UXV0 394 aa14.04□□□□□ -0.16
SPC24-206ENST00000592540 RNF185Q96GF1 192 aa14.04□□□□□ -0.16
SPC24-206ENST00000592540 SPAARA0A1B0GVQ0 90 aa14.04□□□□□ -0.16
SPC24-206ENST00000592540 NPIPB5A8MRT5 1133 aa14.04□□□□□ -0.16
SPC24-206ENST00000592540 LEPP41159 167 aa14.04□□□□□ -0.16
SPC24-206ENST00000592540 ZNF575Q86XF7 245 aa14.04□□□□□ -0.16
SPC24-206ENST00000592540 TTTY13Q9BZ97 58 aa14.04□□□□□ -0.16
SPC24-206ENST00000592540 MSRB1Q9NZV6 116 aa14.04□□□□□ -0.16
SPC24-206ENST00000592540 VSTM5A8MXK1 200 aa14.03□□□□□ -0.16
SPC24-206ENST00000592540 LY6LH3BQJ8 138 aa14.03□□□□□ -0.16
SPC24-206ENST00000592540 FCER1GP30273 86 aa14.03□□□□□ -0.16
SPC24-206ENST00000592540 ZNF562Q6V9R5 426 aa14.03□□□□□ -0.16
SPC24-206ENST00000592540 Q8TAT8 98 aa14.03□□□□□ -0.16
SPC24-206ENST00000592540 CHAC1Q9BUX1 264 aa14.03□□□□□ -0.16
SPC24-206ENST00000592540 COLQQ9Y215 455 aaPredicted RBP14.03□□□□□ -0.16
SPC24-206ENST00000592540 PCNX1Q96RV3 2341 aa14.03□□□□□ -0.16
SPC24-206ENST00000592540 GAS8-AS1O95177 125 aa14.03□□□□□ -0.16
SPC24-206ENST00000592540 BMI1P35226 326 aa14.03□□□□□ -0.16
SPC24-206ENST00000592540 DEFB124Q8NES8 71 aa14.03□□□□□ -0.16
SPC24-206ENST00000592540 LAMA5O15230 3695 aa14.02□□□□□ -0.16
SPC24-206ENST00000592540 TIMM23O14925 209 aa14.02□□□□□ -0.16
SPC24-206ENST00000592540 VGLL1Q99990 258 aa14.02□□□□□ -0.16
SPC24-206ENST00000592540 RPL24P83731 157 aaKnown RBP14.02□□□□□ -0.17
SPC24-206ENST00000592540 PIP4P1Q86T03 277 aa14.02□□□□□ -0.17
SPC24-206ENST00000592540 ZNF318Q5VUA4 2279 aa14.01□□□□□ -0.17
SPC24-206ENST00000592540 TEX48A0A1B0GUV7 120 aa14.01□□□□□ -0.17
SPC24-206ENST00000592540 K7ERJ3 54 aa14.01□□□□□ -0.17
SPC24-206ENST00000592540 PRSS1P07477 247 aa14.01□□□□□ -0.17
SPC24-206ENST00000592540 PHLDA1Q8WV24 401 aaPredicted RBP14.01□□□□□ -0.17
SPC24-206ENST00000592540 IGKCP01834 107 aa14.01□□□□□ -0.17
SPC24-206ENST00000592540 MFAP4P55083 255 aa14.01□□□□□ -0.17
SPC24-206ENST00000592540 NXT2Q9NPJ8 142 aaKnown RBP14.01□□□□□ -0.17
SPC24-206ENST00000592540 TRBV25-1A0A075B6N4 114 aa14□□□□□ -0.17
SPC24-206ENST00000592540 PPIAL4CA0A0B4J2A2 164 aa14□□□□□ -0.17
SPC24-206ENST00000592540 E7EQL1 145 aa14□□□□□ -0.17
SPC24-206ENST00000592540 NBR2O15453 112 aa14□□□□□ -0.17
SPC24-206ENST00000592540 TNFRSF6BO95407 300 aa14□□□□□ -0.17
SPC24-206ENST00000592540 PPIAL4GP0DN37 164 aa14□□□□□ -0.17
SPC24-206ENST00000592540 RPL7P18124 248 aaKnown RBP14□□□□□ -0.17
SPC24-206ENST00000592540 EVI2AP22794 236 aa14□□□□□ -0.17
SPC24-206ENST00000592540 PSMG3-AS1Q96PY0 264 aa14□□□□□ -0.17
SPC24-206ENST00000592540 CNFNQ9BYD5 112 aa14□□□□□ -0.17
SPC24-206ENST00000592540 ADGRG4Q8IZF6 3080 aa14□□□□□ -0.17
SPC24-206ENST00000592540 F8W735 103 aaPredicted RBP13.99□□□□□ -0.17
SPC24-206ENST00000592540 ORM1P02763 201 aa13.99□□□□□ -0.17
SPC24-206ENST00000592540 FANCD2OSQ96PS1 177 aa13.99□□□□□ -0.17
SPC24-206ENST00000592540 TACC2O95359 2948 aa13.99□□□□□ -0.17
SPC24-206ENST00000592540 SRSF2Q01130 221 aaKnown RBP13.99□□□□□ -0.17
SPC24-206ENST00000592540 IGFL4Q6B9Z1 124 aa13.99□□□□□ -0.17
SPC24-206ENST00000592540 GTSCR1Q86UQ5 136 aa13.99□□□□□ -0.17
SPC24-206ENST00000592540 IGLV11-55A0A075B6I3 123 aa13.98□□□□□ -0.17
SPC24-206ENST00000592540 LYNX1G3V0Z9 82 aa13.98□□□□□ -0.17
SPC24-206ENST00000592540 IGHG4P01861 327 aa13.98□□□□□ -0.17
SPC24-206ENST00000592540 LYNX1P0DP58 116 aa13.98□□□□□ -0.17
SPC24-206ENST00000592540 ZNF48Q96MX3 618 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms