RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 HLA-DMBP28068 263 aa12.17□□□□□ -0.46
MBD1-227ENST00000592060 PRR31Q5SQ13 230 aa12.17□□□□□ -0.46
MBD1-227ENST00000592060 NIT1Q86X76 327 aa12.17□□□□□ -0.46
MBD1-227ENST00000592060 NRN1Q9NPD7 142 aa12.17□□□□□ -0.46
MBD1-227ENST00000592060 KIR2DL5BA0A0G2JN68 375 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 KIR2DL5BA0A0G2JPC4 375 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 FBLL1A6NHQ2 334 aaKnown RBP12.16□□□□□ -0.46
MBD1-227ENST00000592060 FAM223BA6NKX1 122 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 ATP5G2Q06055 141 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 TEX43Q6ZNM6 134 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 REC114Q7Z4M0 266 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 FAM223AQ8IWN6 122 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 KIR2DL5AQ8N109 375 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 Q8N976 141 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 GATD1Q8NB37 220 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 PRB1P04280 392 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 C1orf194Q5T5A4 169 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 IGFL4Q6B9Z1 124 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 NRGNQ92686 78 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 PRR25Q96S07 402 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 LINC00527Q9UJ94 153 aa12.16□□□□□ -0.46
MBD1-227ENST00000592060 ZNF705FA8MVS1 300 aaPredicted RBP12.15□□□□□ -0.46
MBD1-227ENST00000592060 IGF1P05019 195 aa12.15□□□□□ -0.46
MBD1-227ENST00000592060 ZNF705DP0CH99 300 aaPredicted RBP12.15□□□□□ -0.46
MBD1-227ENST00000592060 ZNF705BP0CI00 300 aaPredicted RBP12.15□□□□□ -0.46
MBD1-227ENST00000592060 CT45A10P0DMU9 189 aa12.15□□□□□ -0.46
MBD1-227ENST00000592060 U3KQE9 123 aa12.15□□□□□ -0.46
MBD1-227ENST00000592060 A0A1B0GUT8 65 aa12.14□□□□□ -0.47
MBD1-227ENST00000592060 H3BUX3 64 aa12.14□□□□□ -0.47
MBD1-227ENST00000592060 SH2D1AO60880 128 aa12.14□□□□□ -0.47
MBD1-227ENST00000592060 ARMS2P0C7Q2 107 aa12.14□□□□□ -0.47
MBD1-227ENST00000592060 DSCR9P59020 149 aa12.14□□□□□ -0.47
MBD1-227ENST00000592060 RELQ04864 619 aaPredicted RBP12.14□□□□□ -0.47
MBD1-227ENST00000592060 URB1-AS1Q96HZ7 61 aa12.14□□□□□ -0.47
MBD1-227ENST00000592060 VGLL1Q99990 258 aa12.14□□□□□ -0.47
MBD1-227ENST00000592060 LOC102724200A0A096LPH7 203 aaPredicted RBP12.14□□□□□ -0.47
MBD1-227ENST00000592060 IGHG2P01859 326 aa12.14□□□□□ -0.47
MBD1-227ENST00000592060 LY6EQ16553 131 aa12.14□□□□□ -0.47
MBD1-227ENST00000592060 SAPCD1Q5SSQ6 148 aa12.14□□□□□ -0.47
MBD1-227ENST00000592060 Q6AWC8 147 aa12.14□□□□□ -0.47
MBD1-227ENST00000592060 FAM19A2Q8N3H0 131 aa12.14□□□□□ -0.47
MBD1-227ENST00000592060 HIF1ANQ9NWT6 349 aa12.14□□□□□ -0.47
MBD1-227ENST00000592060 B4DSR2 109 aa12.13□□□□□ -0.47
MBD1-227ENST00000592060 BRI3O95415 125 aa12.13□□□□□ -0.47
MBD1-227ENST00000592060 AVPP01185 164 aa12.13□□□□□ -0.47
MBD1-227ENST00000592060 TRGV3P03979 118 aa12.13□□□□□ -0.47
MBD1-227ENST00000592060 FAM162BQ5T6X4 162 aa12.13□□□□□ -0.47
MBD1-227ENST00000592060 LCN12Q6JVE5 192 aa12.13□□□□□ -0.47
MBD1-227ENST00000592060 Q8TAT8 98 aa12.13□□□□□ -0.47
MBD1-227ENST00000592060 METTL26Q96S19 204 aa12.13□□□□□ -0.47
MBD1-227ENST00000592060 SLC50A1Q9BRV3 221 aa12.13□□□□□ -0.47
MBD1-227ENST00000592060 NDUFAF3Q9BU61 184 aa12.13□□□□□ -0.47
MBD1-227ENST00000592060 IGHV3-66A0A0C4DH42 116 aa12.12□□□□□ -0.47
MBD1-227ENST00000592060 PPIFP30405 207 aaKnown RBP12.12□□□□□ -0.47
MBD1-227ENST00000592060 KRTDAPP60985 99 aa12.12□□□□□ -0.47
MBD1-227ENST00000592060 RIGQ13278 110 aa12.12□□□□□ -0.47
MBD1-227ENST00000592060 USP9XQ93008 2570 aaPredicted RBP12.12□□□□□ -0.47
MBD1-227ENST00000592060 A0A1B0GW15 77 aa12.12□□□□□ -0.47
MBD1-227ENST00000592060 NDFIP1Q9BT67 221 aa12.12□□□□□ -0.47
MBD1-227ENST00000592060 A0A096LNT2 108 aa12.11□□□□□ -0.47
MBD1-227ENST00000592060 TMEM189A5PLL7 270 aa12.11□□□□□ -0.47
MBD1-227ENST00000592060 PRAC2D3DTV9 90 aa12.11□□□□□ -0.47
MBD1-227ENST00000592060 H3BUA1 57 aa12.11□□□□□ -0.47
MBD1-227ENST00000592060 ZNF207O43670 478 aaKnown RBP12.11□□□□□ -0.47
MBD1-227ENST00000592060 SLC25A16P16260 332 aa12.11□□□□□ -0.47
MBD1-227ENST00000592060 NTF3P20783 257 aa12.11□□□□□ -0.47
MBD1-227ENST00000592060 ZNF80P51504 273 aaPredicted RBP12.11□□□□□ -0.47
MBD1-227ENST00000592060 RNASEKQ6P5S7 137 aaKnown RBP12.11□□□□□ -0.47
MBD1-227ENST00000592060 SVEP1Q4LDE5 3571 aa12.11□□□□□ -0.47
MBD1-227ENST00000592060 SPTAN1Q13813 2472 aaKnown RBP12.11□□□□□ -0.47
MBD1-227ENST00000592060 RBAKDNA6NC62 111 aa12.1□□□□□ -0.47
MBD1-227ENST00000592060 M0QZK8 103 aa12.1□□□□□ -0.47
MBD1-227ENST00000592060 HSBP1O75506 76 aa12.1□□□□□ -0.47
MBD1-227ENST00000592060 C3orf79P0CE67 100 aa12.1□□□□□ -0.47
MBD1-227ENST00000592060 TDRG1Q3Y452 100 aa12.1□□□□□ -0.47
MBD1-227ENST00000592060 RNF182Q8N6D2 247 aa12.1□□□□□ -0.47
MBD1-227ENST00000592060 PSMG3-AS1Q96PY0 264 aa12.1□□□□□ -0.47
MBD1-227ENST00000592060 ZNF462Q96JM2 2506 aa12.1□□□□□ -0.47
MBD1-227ENST00000592060 IGHV3OR16-13A0A075B7E8 117 aa12.1□□□□□ -0.47
MBD1-227ENST00000592060 IGHV3-74A0A0B4J1X5 117 aa12.1□□□□□ -0.47
MBD1-227ENST00000592060 TRAV8-2A0A0B4J237 113 aa12.1□□□□□ -0.47
MBD1-227ENST00000592060 GATA3P23771 443 aa12.1□□□□□ -0.47
MBD1-227ENST00000592060 SRSF1Q07955 248 aaKnown RBP eCLIP12.1□□□□□ -0.47
MBD1-227ENST00000592060 COL12A1Q99715 3063 aa12.1□□□□□ -0.47
MBD1-227ENST00000592060 IGHV3-49A0A0A0MS15 119 aa12.09□□□□□ -0.47
MBD1-227ENST00000592060 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.09□□□□□ -0.47
MBD1-227ENST00000592060 ARL3P36405 182 aa12.09□□□□□ -0.47
MBD1-227ENST00000592060 ERCC8Q13216 396 aa12.09□□□□□ -0.47
MBD1-227ENST00000592060 MRPL53Q96EL3 112 aaKnown RBP12.09□□□□□ -0.47
MBD1-227ENST00000592060 C20orf144Q9BQM9 153 aa12.09□□□□□ -0.47
MBD1-227ENST00000592060 TENM4Q6N022 2769 aa12.09□□□□□ -0.47
MBD1-227ENST00000592060 TRBV12-3P01733 135 aa12.09□□□□□ -0.47
MBD1-227ENST00000592060 BLCAPP62952 87 aa12.09□□□□□ -0.47
MBD1-227ENST00000592060 SRSF2Q01130 221 aaKnown RBP12.09□□□□□ -0.47
MBD1-227ENST00000592060 Q6ZS46 218 aa12.09□□□□□ -0.47
MBD1-227ENST00000592060 GLMPQ8WWB7 406 aa12.09□□□□□ -0.47
MBD1-227ENST00000592060 VPS13CQ709C8 3753 aa12.08□□□□□ -0.48
MBD1-227ENST00000592060 FLNCQ14315 2725 aa12.08□□□□□ -0.48
MBD1-227ENST00000592060 TMSB15BA0A087X1C1 80 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms