RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 NPYP01303 97 aa4.7□□□□□ -1.66
NPC1-213ENST00000591955 SLC25A16P16260 332 aa4.7□□□□□ -1.66
NPC1-213ENST00000591955 GFERP55789 205 aa4.7□□□□□ -1.66
NPC1-213ENST00000591955 FAM104BQ5XKR9 115 aa4.7□□□□□ -1.66
NPC1-213ENST00000591955 LRRC75A-AS1Q8N1F1 130 aa4.7□□□□□ -1.66
NPC1-213ENST00000591955 ZCCHC24Q8N2G6 241 aaKnown RBP4.7□□□□□ -1.66
NPC1-213ENST00000591955 FAM169BQ8N8A8 192 aa4.7□□□□□ -1.66
NPC1-213ENST00000591955 RLN3Q8WXF3 142 aa4.7□□□□□ -1.66
NPC1-213ENST00000591955 C1orf159Q96HA4 380 aa4.7□□□□□ -1.66
NPC1-213ENST00000591955 DNAJC30Q96LL9 226 aa4.7□□□□□ -1.66
NPC1-213ENST00000591955 TRGV9Q99603 122 aa4.7□□□□□ -1.66
NPC1-213ENST00000591955 CXXC4Q9H2H0 198 aa4.7□□□□□ -1.66
NPC1-213ENST00000591955 FBXL15Q9H469 300 aa4.7□□□□□ -1.66
NPC1-213ENST00000591955 HIF1ANQ9NWT6 349 aa4.7□□□□□ -1.66
NPC1-213ENST00000591955 ONECUT1Q9UBC0 465 aa4.7□□□□□ -1.66
NPC1-213ENST00000591955 PCNX2A6NKB5 2137 aa4.7□□□□□ -1.66
NPC1-213ENST00000591955 ASXL3Q9C0F0 2248 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 PI4KAP42356 2102 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 IGHV1OR21-1A0A087WYE8 117 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 AGFG2O95081 481 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 CNIH1O95406 144 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 MOSP00540 346 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 CFIP05156 583 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 ACYP1P07311 99 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 RNASE2P10153 161 aaKnown RBP4.69□□□□□ -1.66
NPC1-213ENST00000591955 COL8A2P25067 703 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 XGP55808 180 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 UBE2D3P61077 147 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 UBE2D2P62837 147 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 RPS28P62857 69 aaKnown RBP4.69□□□□□ -1.66
NPC1-213ENST00000591955 PDE6HQ13956 83 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 ODF1Q14990 250 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 TM4SF20Q53R12 229 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 Q6ZR03 302 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 COX8CQ7Z4L0 72 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 SH2D6Q7Z4S9 175 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 SMIM20Q8N5G0 67 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 DEFB119Q8N690 84 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 OR13C6PQ8NH95 151 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 MYOZ3Q8TDC0 251 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 GLMPQ8WWB7 406 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 NRGNQ92686 78 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 RASL11BQ9BPW5 248 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 C20orf78Q9BR46 151 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 SRXN1Q9BYN0 137 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 FGF23Q9GZV9 251 aaPredicted RBP4.69□□□□□ -1.66
NPC1-213ENST00000591955 MDFICQ9P1T7 246 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 TP73-AS1Q9UF72 201 aa4.69□□□□□ -1.66
NPC1-213ENST00000591955 ARHGEF17Q96PE2 2063 aaPredicted RBP4.69□□□□□ -1.66
NPC1-213ENST00000591955 TRBV7-3A0A075B6L6 115 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 A0A096LNJ9 63 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 C15orf65H3BRN8 121 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 J3KT08 172 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 SNAI2O43623 268 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 SCGB2A1O75556 95 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 MT-ATP8P03928 68 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 IGHV4-34P06331 123 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 PRSS1P07477 247 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 CSN3P07498 182 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 LGALS1P09382 135 aaKnown RBP4.68□□□□□ -1.66
NPC1-213ENST00000591955 CD59P13987 128 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 CKS2P33552 79 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 CFHR2P36980 270 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 RPL13AP40429 203 aaKnown RBP4.68□□□□□ -1.66
NPC1-213ENST00000591955 HERVK_113P61574 105 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 PAX8Q06710 450 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 SPINK9Q5DT21 86 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 TMEM78Q5T7P6 136 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 ACP7Q6ZNF0 438 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 PCP2Q8IVA1 136 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 ITLN1Q8WWA0 313 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 TPPP3Q9BW30 176 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 HINT2Q9BX68 163 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 PROCRQ9UNN8 238 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 HHLA3Q9XRX5 114 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 PTPRQQ9UMZ3 2332 aa4.68□□□□□ -1.66
NPC1-213ENST00000591955 URB1O60287 2271 aaKnown RBP4.67□□□□□ -1.66
NPC1-213ENST00000591955 A0A087WX48 190 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 IGHV1-45A0A0A0MS14 117 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 IGHV3-15A0A0B4J1V0 119 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 PRSS29PA6NIE9 313 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 ZNF785A8K8V0 405 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 D6R8Y8 96 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 H7C1H1 209 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 K7EM74 188 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 CXCL13O43927 109 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 NCR2O95944 276 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 PPP1R17O96001 155 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 FAM106CPP0CH98 169 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 CD27P26842 260 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 HLA-DMBP28068 263 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 IFI27P40305 119 aaPredicted RBP4.67□□□□□ -1.66
NPC1-213ENST00000591955 UBE2D1P51668 147 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 ZNF137PP52743 207 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 B3GALT5-AS1P59052 145 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 FAM106AQ4KMX7 169 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 ZC2HC1BQ5TFG8 222 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 LINC00305Q7Z4B0 112 aa4.67□□□□□ -1.66
NPC1-213ENST00000591955 AMN1Q8IY45 258 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms