RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 WT1-ASQ06250 92 aa12.05□□□□□ -0.48
CIRBP-228ENST00000590347 GAGE5Q13069 117 aa12.05□□□□□ -0.48
CIRBP-228ENST00000590347 GAGE6Q13070 117 aa12.05□□□□□ -0.48
CIRBP-228ENST00000590347 MRPL51Q4U2R6 128 aaKnown RBP12.05□□□□□ -0.48
CIRBP-228ENST00000590347 TMEM8BA6NDV4 472 aa12.05□□□□□ -0.48
CIRBP-228ENST00000590347 FSTL3O95633 263 aa12.05□□□□□ -0.48
CIRBP-228ENST00000590347 TTC9CQ8N5M4 171 aa12.05□□□□□ -0.48
CIRBP-228ENST00000590347 HHLA3Q9XRX5 114 aa12.05□□□□□ -0.48
CIRBP-228ENST00000590347 RELNP78509 3460 aa12.05□□□□□ -0.48
CIRBP-228ENST00000590347 MUC6Q6W4X9 2439 aa12.05□□□□□ -0.48
CIRBP-228ENST00000590347 ADGRG4Q8IZF6 3080 aa12.05□□□□□ -0.48
CIRBP-228ENST00000590347 PRTN3P24158 256 aa12.04□□□□□ -0.48
CIRBP-228ENST00000590347 LYZP61626 148 aa12.04□□□□□ -0.48
CIRBP-228ENST00000590347 DEFB124Q8NES8 71 aa12.04□□□□□ -0.48
CIRBP-228ENST00000590347 FAM90A9PA6NNJ1 464 aa12.04□□□□□ -0.48
CIRBP-228ENST00000590347 PPP1R35Q8TAP8 253 aa12.04□□□□□ -0.48
CIRBP-228ENST00000590347 DEFB104AQ8WTQ1 72 aa12.04□□□□□ -0.48
CIRBP-228ENST00000590347 CEP295Q9C0D2 2601 aa12.04□□□□□ -0.48
CIRBP-228ENST00000590347 CRIP1P50238 77 aa12.04□□□□□ -0.48
CIRBP-228ENST00000590347 RRN3P1Q2M238 152 aa12.04□□□□□ -0.48
CIRBP-228ENST00000590347 SOX21Q9Y651 276 aaPredicted RBP12.04□□□□□ -0.48
CIRBP-228ENST00000590347 DSCAMO60469 2012 aa12.04□□□□□ -0.48
CIRBP-228ENST00000590347 ZNF292O60281 2723 aa12.03□□□□□ -0.48
CIRBP-228ENST00000590347 HARBI1Q96MB7 349 aa12.03□□□□□ -0.48
CIRBP-228ENST00000590347 ZNF492Q9P255 531 aa12.03□□□□□ -0.48
CIRBP-228ENST00000590347 RPL32P62910 135 aaKnown RBP12.03□□□□□ -0.48
CIRBP-228ENST00000590347 ODF1Q14990 250 aa12.03□□□□□ -0.48
CIRBP-228ENST00000590347 C2orf83Q53S99 150 aa12.03□□□□□ -0.48
CIRBP-228ENST00000590347 ORMDL3Q8N138 153 aa12.03□□□□□ -0.48
CIRBP-228ENST00000590347 TMEM75Q8N9X5 138 aa12.03□□□□□ -0.48
CIRBP-228ENST00000590347 FMC1Q96HJ9 113 aa12.03□□□□□ -0.48
CIRBP-228ENST00000590347 AJUBAQ96IF1 538 aa12.03□□□□□ -0.48
CIRBP-228ENST00000590347 CARD19Q96LW7 228 aa12.03□□□□□ -0.48
CIRBP-228ENST00000590347 TPSG1Q9NRR2 321 aa12.03□□□□□ -0.48
CIRBP-228ENST00000590347 KLF12Q9Y4X4 402 aa12.03□□□□□ -0.48
CIRBP-228ENST00000590347 IGHV3-72A0A0B4J1Y9 119 aa12.02□□□□□ -0.48
CIRBP-228ENST00000590347 ID1P41134 155 aa12.02□□□□□ -0.48
CIRBP-228ENST00000590347 DIAPH2-AS1Q14236 149 aa12.02□□□□□ -0.48
CIRBP-228ENST00000590347 SLC25A48Q6ZT89 311 aaKnown RBP12.02□□□□□ -0.48
CIRBP-228ENST00000590347 KLK15Q9H2R5 256 aa12.02□□□□□ -0.48
CIRBP-228ENST00000590347 HIF1ANQ9NWT6 349 aa12.02□□□□□ -0.48
CIRBP-228ENST00000590347 IGKCP01834 107 aa12.02□□□□□ -0.49
CIRBP-228ENST00000590347 TWIST1Q15672 202 aa12.02□□□□□ -0.49
CIRBP-228ENST00000590347 PLA2G2CQ5R387 149 aa12.02□□□□□ -0.49
CIRBP-228ENST00000590347 MRPL35Q9NZE8 188 aaKnown RBP12.02□□□□□ -0.49
CIRBP-228ENST00000590347 CTSZQ9UBR2 303 aa12.02□□□□□ -0.49
CIRBP-228ENST00000590347 S4R3C0 116 aa12.02□□□□□ -0.49
CIRBP-228ENST00000590347 OR11H12B2RN74 326 aa12.02□□□□□ -0.49
CIRBP-228ENST00000590347 ERHP84090 104 aaKnown RBP12.02□□□□□ -0.49
CIRBP-228ENST00000590347 Q6AWC8 147 aa12.02□□□□□ -0.49
CIRBP-228ENST00000590347 OR11H1Q8NG94 326 aa12.02□□□□□ -0.49
CIRBP-228ENST00000590347 OR11H2Q8NH07 326 aa12.02□□□□□ -0.49
CIRBP-228ENST00000590347 ZNF714Q96N38 554 aa12.02□□□□□ -0.49
CIRBP-228ENST00000590347 DPF1Q92782 380 aa12.01□□□□□ -0.49
CIRBP-228ENST00000590347 TTTY12Q9BZ98 90 aa12.01□□□□□ -0.49
CIRBP-228ENST00000590347 SPRY4Q9C004 299 aa12.01□□□□□ -0.49
CIRBP-228ENST00000590347 SSUH2Q9Y2M2 353 aa12.01□□□□□ -0.49
CIRBP-228ENST00000590347 LINC01549A6NIU2 74 aa12.01□□□□□ -0.49
CIRBP-228ENST00000590347 IGLV2-11P01706 119 aa12.01□□□□□ -0.49
CIRBP-228ENST00000590347 NHLRC4P0CG21 123 aaPredicted RBP12.01□□□□□ -0.49
CIRBP-228ENST00000590347 KLRD1Q13241 179 aa12.01□□□□□ -0.49
CIRBP-228ENST00000590347 ZNF502Q8TBZ5 544 aa12.01□□□□□ -0.49
CIRBP-228ENST00000590347 HLA-DRB4P13762 266 aa12□□□□□ -0.49
CIRBP-228ENST00000590347 CT83Q5H943 113 aa12□□□□□ -0.49
CIRBP-228ENST00000590347 HLA-DRB4X5D2U9 266 aa12□□□□□ -0.49
CIRBP-228ENST00000590347 CLEC3BP05452 202 aa12□□□□□ -0.49
CIRBP-228ENST00000590347 CCL11P51671 97 aa12□□□□□ -0.49
CIRBP-228ENST00000590347 TEX29Q8N6K0 151 aa12□□□□□ -0.49
CIRBP-228ENST00000590347 MRPL20Q9BYC9 149 aaKnown RBP12□□□□□ -0.49
CIRBP-228ENST00000590347 GFRA4Q9GZZ7 299 aa12□□□□□ -0.49
CIRBP-228ENST00000590347 FAM104BQ5XKR9 115 aa12□□□□□ -0.49
CIRBP-228ENST00000590347 ZFAND6Q6FIF0 208 aa12□□□□□ -0.49
CIRBP-228ENST00000590347 C17orf58Q2M2W7 97 aa11.99□□□□□ -0.49
CIRBP-228ENST00000590347 IGFL4Q6B9Z1 124 aa11.99□□□□□ -0.49
CIRBP-228ENST00000590347 MORN3Q6PF18 240 aaPredicted RBP11.99□□□□□ -0.49
CIRBP-228ENST00000590347 TMEM158Q8WZ71 300 aa11.99□□□□□ -0.49
CIRBP-228ENST00000590347 IGKV3D-15A0A087WSY6 115 aa11.99□□□□□ -0.49
CIRBP-228ENST00000590347 GP9P14770 177 aa11.99□□□□□ -0.49
CIRBP-228ENST00000590347 KLF17Q5JT82 389 aaPredicted RBP11.99□□□□□ -0.49
CIRBP-228ENST00000590347 CRLF1O75462 422 aa11.98□□□□□ -0.49
CIRBP-228ENST00000590347 MEOX1P50221 254 aa11.98□□□□□ -0.49
CIRBP-228ENST00000590347 MOGAT3Q86VF5 341 aa11.98□□□□□ -0.49
CIRBP-228ENST00000590347 TNFRSF13BO14836 293 aaPredicted RBP11.98□□□□□ -0.49
CIRBP-228ENST00000590347 ZNF883P0CG24 379 aa11.98□□□□□ -0.49
CIRBP-228ENST00000590347 EFNA4P52798 201 aa11.98□□□□□ -0.49
CIRBP-228ENST00000590347 Q8TAT8 98 aa11.98□□□□□ -0.49
CIRBP-228ENST00000590347 CXXC4Q9H2H0 198 aa11.98□□□□□ -0.49
CIRBP-228ENST00000590347 DLX1P56177 255 aa11.97□□□□□ -0.49
CIRBP-228ENST00000590347 CFAP126Q5VTH2 177 aa11.97□□□□□ -0.49
CIRBP-228ENST00000590347 OR1L8Q8NGR8 309 aa11.97□□□□□ -0.49
CIRBP-228ENST00000590347 RITA1Q96K30 269 aa11.97□□□□□ -0.49
CIRBP-228ENST00000590347 IQCF6A8MYZ5 107 aa11.97□□□□□ -0.49
CIRBP-228ENST00000590347 TMEM95Q3KNT9 176 aa11.97□□□□□ -0.49
CIRBP-228ENST00000590347 TRAV4A0A0B4J268 109 aa11.97□□□□□ -0.49
CIRBP-228ENST00000590347 KIR2DS2P43631 304 aa11.97□□□□□ -0.49
CIRBP-228ENST00000590347 CGB1A6NKQ9 187 aa11.96□□□□□ -0.49
CIRBP-228ENST00000590347 SPRY3O43610 288 aa11.96□□□□□ -0.49
CIRBP-228ENST00000590347 IL4P05112 153 aa11.96□□□□□ -0.49
CIRBP-228ENST00000590347 ACACAQ13085 2346 aa11.96□□□□□ -0.49
CIRBP-228ENST00000590347 PCNX1Q96RV3 2341 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms