RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 NMBP08949 121 aa11.26□□□□□ -0.61
ATG4D-211ENST00000589753 CSN1S1P47710 185 aa11.26□□□□□ -0.61
ATG4D-211ENST00000589753 RAB14P61106 215 aa11.26□□□□□ -0.61
ATG4D-211ENST00000589753 SUMO1P63165 101 aaKnown RBP11.26□□□□□ -0.61
ATG4D-211ENST00000589753 FOXI2Q6ZQN5 318 aa11.26□□□□□ -0.61
ATG4D-211ENST00000589753 CMTM2Q8TAZ6 248 aa11.26□□□□□ -0.61
ATG4D-211ENST00000589753 RXFP4Q8TDU9 374 aa11.26□□□□□ -0.61
ATG4D-211ENST00000589753 NKX6-2Q9C056 277 aaPredicted RBP11.26□□□□□ -0.61
ATG4D-211ENST00000589753 MANBALQ9NQG1 85 aa11.26□□□□□ -0.61
ATG4D-211ENST00000589753 CMYA5Q8N3K9 4069 aa11.26□□□□□ -0.61
ATG4D-211ENST00000589753 KNCNA6PVL3 124 aa11.25□□□□□ -0.61
ATG4D-211ENST00000589753 GGTLC3B5MD39 225 aa11.25□□□□□ -0.61
ATG4D-211ENST00000589753 IFNA1P01562 189 aa11.25□□□□□ -0.61
ATG4D-211ENST00000589753 SLC25A5P05141 298 aaKnown RBP11.25□□□□□ -0.61
ATG4D-211ENST00000589753 PRB4P10163 310 aaPredicted RBP11.25□□□□□ -0.61
ATG4D-211ENST00000589753 DEFB1P60022 68 aa11.25□□□□□ -0.61
ATG4D-211ENST00000589753 PMS2P11Q13670 270 aa11.25□□□□□ -0.61
ATG4D-211ENST00000589753 ACTL10Q5JWF8 245 aa11.25□□□□□ -0.61
ATG4D-211ENST00000589753 CST9LP1Q5W188 147 aa11.25□□□□□ -0.61
ATG4D-211ENST00000589753 EBLN2Q6P2I7 272 aa11.25□□□□□ -0.61
ATG4D-211ENST00000589753 SAV1Q9H4B6 383 aaPredicted RBP11.25□□□□□ -0.61
ATG4D-211ENST00000589753 SORL1Q92673 2214 aa11.24□□□□□ -0.61
ATG4D-211ENST00000589753 PRAC2D3DTV9 90 aa11.24□□□□□ -0.61
ATG4D-211ENST00000589753 F6UB75 175 aa11.24□□□□□ -0.61
ATG4D-211ENST00000589753 GDF5OSQ5U4N7 250 aa11.24□□□□□ -0.61
ATG4D-211ENST00000589753 C5orf17Q8NAS9 161 aa11.24□□□□□ -0.61
ATG4D-211ENST00000589753 CITED4Q96RK1 184 aa11.24□□□□□ -0.61
ATG4D-211ENST00000589753 SRD5A3Q9H8P0 318 aa11.24□□□□□ -0.61
ATG4D-211ENST00000589753 A0A0J9YX75 114 aa11.23□□□□□ -0.61
ATG4D-211ENST00000589753 DIRC3C9JPN6 131 aa11.23□□□□□ -0.61
ATG4D-211ENST00000589753 HLA-DRB4P13762 266 aa11.23□□□□□ -0.61
ATG4D-211ENST00000589753 ATP5G3P48201 142 aa11.23□□□□□ -0.61
ATG4D-211ENST00000589753 HAGHQ16775 308 aa11.23□□□□□ -0.61
ATG4D-211ENST00000589753 STHQ8IWL8 128 aa11.23□□□□□ -0.61
ATG4D-211ENST00000589753 ARL6IP6Q8N6S5 226 aa11.23□□□□□ -0.61
ATG4D-211ENST00000589753 OR8A1Q8NGG7 326 aa11.23□□□□□ -0.61
ATG4D-211ENST00000589753 TUBA4BQ9H853 241 aa11.23□□□□□ -0.61
ATG4D-211ENST00000589753 RPH3ALQ9UNE2 315 aa11.23□□□□□ -0.61
ATG4D-211ENST00000589753 HLA-DRB4X5D2U9 266 aa11.23□□□□□ -0.61
ATG4D-211ENST00000589753 C11orf94C9JXX5 98 aa11.22□□□□□ -0.61
ATG4D-211ENST00000589753 H3BMM0 161 aa11.22□□□□□ -0.61
ATG4D-211ENST00000589753 K7EIL1 84 aa11.22□□□□□ -0.61
ATG4D-211ENST00000589753 DUSP14O95147 198 aaKnown RBP11.22□□□□□ -0.61
ATG4D-211ENST00000589753 ZNF705DP0CH99 300 aaPredicted RBP11.22□□□□□ -0.61
ATG4D-211ENST00000589753 ZNF705BP0CI00 300 aaPredicted RBP11.22□□□□□ -0.61
ATG4D-211ENST00000589753 IGHV4-30-4P0DP06 118 aa11.22□□□□□ -0.61
ATG4D-211ENST00000589753 BCL2P10415 239 aa11.22□□□□□ -0.61
ATG4D-211ENST00000589753 TAGLN2P37802 199 aaKnown RBP11.22□□□□□ -0.61
ATG4D-211ENST00000589753 GNG5P63218 68 aa11.22□□□□□ -0.61
ATG4D-211ENST00000589753 HIST1H1AQ02539 215 aaPredicted RBP11.22□□□□□ -0.61
ATG4D-211ENST00000589753 MGAM2Q2M2H8 2515 aa11.22□□□□□ -0.61
ATG4D-211ENST00000589753 CCDC28AQ8IWP9 274 aa11.22□□□□□ -0.61
ATG4D-211ENST00000589753 OR10J6PQ8NGY7 276 aa11.22□□□□□ -0.61
ATG4D-211ENST00000589753 TXNDC17Q9BRA2 123 aa11.22□□□□□ -0.61
ATG4D-211ENST00000589753 EPDR1Q9UM22 224 aa11.22□□□□□ -0.61
ATG4D-211ENST00000589753 IGKV2-40A0A087WW87 121 aaPredicted RBP11.21□□□□□ -0.61
ATG4D-211ENST00000589753 RGS13O14921 159 aa11.21□□□□□ -0.61
ATG4D-211ENST00000589753 IGKV2D-40P01614 121 aaPredicted RBP11.21□□□□□ -0.61
ATG4D-211ENST00000589753 TCRAP04437 139 aa11.21□□□□□ -0.61
ATG4D-211ENST00000589753 CNN1P51911 297 aaKnown RBP11.21□□□□□ -0.61
ATG4D-211ENST00000589753 CLLU1Q5K131 121 aa11.21□□□□□ -0.61
ATG4D-211ENST00000589753 OR4B1Q8NGF8 309 aa11.21□□□□□ -0.61
ATG4D-211ENST00000589753 TCEAL7Q9BRU2 100 aa11.21□□□□□ -0.61
ATG4D-211ENST00000589753 VAX2Q9UIW0 290 aa11.21□□□□□ -0.61
ATG4D-211ENST00000589753 LOC102723971A0A1B0GUV8 181 aa11.2□□□□□ -0.62
ATG4D-211ENST00000589753 RBAKDNA6NC62 111 aa11.2□□□□□ -0.62
ATG4D-211ENST00000589753 RBFOX3A6NFN3 312 aa11.2□□□□□ -0.62
ATG4D-211ENST00000589753 A8MZ25 164 aa11.2□□□□□ -0.62
ATG4D-211ENST00000589753 MEF2BQ02080 365 aaPredicted RBP11.2□□□□□ -0.62
ATG4D-211ENST00000589753 GOLT1AQ6ZVE7 132 aa11.2□□□□□ -0.62
ATG4D-211ENST00000589753 TRPT1Q86TN4 253 aaKnown RBP11.2□□□□□ -0.62
ATG4D-211ENST00000589753 HIST1H2BAQ96A08 127 aa11.2□□□□□ -0.62
ATG4D-211ENST00000589753 ATG101Q9BSB4 218 aa11.2□□□□□ -0.62
ATG4D-211ENST00000589753 LOC102724200A0A096LPH7 203 aaPredicted RBP11.19□□□□□ -0.62
ATG4D-211ENST00000589753 SERTM2A0A1B0GWG4 89 aa11.19□□□□□ -0.62
ATG4D-211ENST00000589753 NPIPB6E9PJ23 425 aa11.19□□□□□ -0.62
ATG4D-211ENST00000589753 F6UZH7 168 aa11.19□□□□□ -0.62
ATG4D-211ENST00000589753 K7EQM0 130 aa11.19□□□□□ -0.62
ATG4D-211ENST00000589753 PEX7O00628 323 aa11.19□□□□□ -0.62
ATG4D-211ENST00000589753 IGKV3-20P01619 116 aa11.19□□□□□ -0.62
ATG4D-211ENST00000589753 RPL35AP18077 110 aaKnown RBP11.19□□□□□ -0.62
ATG4D-211ENST00000589753 ERCC8Q13216 396 aa11.19□□□□□ -0.62
ATG4D-211ENST00000589753 C9orf47Q6ZRZ4 202 aa11.19□□□□□ -0.62
ATG4D-211ENST00000589753 CYB561D1Q8N8Q1 229 aa11.19□□□□□ -0.62
ATG4D-211ENST00000589753 FAM210AQ96ND0 272 aa11.19□□□□□ -0.62
ATG4D-211ENST00000589753 CLUHP3Q96NS8 147 aa11.19□□□□□ -0.62
ATG4D-211ENST00000589753 RARRES2Q99969 163 aa11.19□□□□□ -0.62
ATG4D-211ENST00000589753 VGLL1Q99990 258 aa11.19□□□□□ -0.62
ATG4D-211ENST00000589753 RBMY1BA6NDE4 496 aaKnown RBP11.18□□□□□ -0.62
ATG4D-211ENST00000589753 RBMY1EA6NEQ0 496 aaKnown RBP11.18□□□□□ -0.62
ATG4D-211ENST00000589753 A8MTW9 85 aa11.18□□□□□ -0.62
ATG4D-211ENST00000589753 RBMY1DP0C7P1 496 aaKnown RBP11.18□□□□□ -0.62
ATG4D-211ENST00000589753 DEFB121Q5J5C9 76 aa11.18□□□□□ -0.62
ATG4D-211ENST00000589753 TOR2AQ5JU69 321 aa11.18□□□□□ -0.62
ATG4D-211ENST00000589753 ZNF506Q5JVG8 444 aa11.18□□□□□ -0.62
ATG4D-211ENST00000589753 TMEM78Q5T7P6 136 aa11.18□□□□□ -0.62
ATG4D-211ENST00000589753 LINC00477Q96M19 166 aa11.18□□□□□ -0.62
ATG4D-211ENST00000589753 EIF5A2Q9GZV4 153 aaKnown RBP11.18□□□□□ -0.62
ATG4D-211ENST00000589753 AGPAT4-IT1Q9H0P7 198 aa11.18□□□□□ -0.62
ATG4D-211ENST00000589753 PPP1R14DQ9NXH3 145 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms