RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 PRADC1Q9BSG0 188 aa11.79□□□□□ -0.52
SMARCA4-214ENST00000589677 TAX1BP3O14907 124 aa11.79□□□□□ -0.52
SMARCA4-214ENST00000589677 OOSP1A8MZH6 123 aa11.79□□□□□ -0.52
SMARCA4-214ENST00000589677 A0A1W2PPI3 338 aa11.78□□□□□ -0.52
SMARCA4-214ENST00000589677 SNRNP200O75643 2136 aaKnown RBP11.78□□□□□ -0.52
SMARCA4-214ENST00000589677 NPYP01303 97 aa11.78□□□□□ -0.52
SMARCA4-214ENST00000589677 C8orf49Q96NF6 230 aa11.78□□□□□ -0.52
SMARCA4-214ENST00000589677 SPXQ9BT56 116 aa11.78□□□□□ -0.52
SMARCA4-214ENST00000589677 LINC01560Q8TB33 94 aa11.78□□□□□ -0.52
SMARCA4-214ENST00000589677 TP53TG1Q9Y2A0 90 aa11.78□□□□□ -0.52
SMARCA4-214ENST00000589677 TRGV2A0A075B6R0 118 aa11.78□□□□□ -0.52
SMARCA4-214ENST00000589677 IGHV3OR16-10A0A075B7F0 116 aa11.78□□□□□ -0.52
SMARCA4-214ENST00000589677 PAX4O43316 350 aa11.78□□□□□ -0.52
SMARCA4-214ENST00000589677 G3V4G9 280 aa11.77□□□□□ -0.52
SMARCA4-214ENST00000589677 C15orf53Q8NAA6 179 aa11.77□□□□□ -0.52
SMARCA4-214ENST00000589677 SCN5AQ14524 2016 aa11.77□□□□□ -0.52
SMARCA4-214ENST00000589677 LINC01545Q5VT33 79 aa11.77□□□□□ -0.52
SMARCA4-214ENST00000589677 DKK2Q9UBU2 259 aa11.77□□□□□ -0.52
SMARCA4-214ENST00000589677 A0A087WX48 190 aa11.77□□□□□ -0.53
SMARCA4-214ENST00000589677 TRBV7-1A0A0A6YYK4 115 aa11.77□□□□□ -0.53
SMARCA4-214ENST00000589677 SRRM4A7MD48 611 aaKnown RBP11.77□□□□□ -0.53
SMARCA4-214ENST00000589677 LTAP01374 205 aa11.77□□□□□ -0.53
SMARCA4-214ENST00000589677 MALP21145 153 aa11.77□□□□□ -0.53
SMARCA4-214ENST00000589677 IGLL5B9A064 214 aa11.77□□□□□ -0.53
SMARCA4-214ENST00000589677 SOCS3O14543 225 aa11.77□□□□□ -0.53
SMARCA4-214ENST00000589677 PRB3Q04118 309 aaPredicted RBP11.77□□□□□ -0.53
SMARCA4-214ENST00000589677 C5orf64Q2M2E5 130 aa11.77□□□□□ -0.53
SMARCA4-214ENST00000589677 FOXI2Q6ZQN5 318 aa11.77□□□□□ -0.53
SMARCA4-214ENST00000589677 FXYD5Q96DB9 178 aa11.77□□□□□ -0.53
SMARCA4-214ENST00000589677 PEMTQ9UBM1 199 aa11.77□□□□□ -0.53
SMARCA4-214ENST00000589677 PLXNA3P51805 1871 aa11.77□□□□□ -0.53
SMARCA4-214ENST00000589677 ZFP36L1Q07352 338 aaKnown RBP11.76□□□□□ -0.53
SMARCA4-214ENST00000589677 VWC2LB2RUY7 222 aa11.76□□□□□ -0.53
SMARCA4-214ENST00000589677 SHISA9B4DS77 424 aa11.76□□□□□ -0.53
SMARCA4-214ENST00000589677 TMEM178BH3BS89 294 aa11.76□□□□□ -0.53
SMARCA4-214ENST00000589677 SRD5A1P18405 259 aa11.76□□□□□ -0.53
SMARCA4-214ENST00000589677 THSD7BQ9C0I4 1608 aa11.76□□□□□ -0.53
SMARCA4-214ENST00000589677 IGHG4P01861 327 aa11.75□□□□□ -0.53
SMARCA4-214ENST00000589677 RNASE6Q93091 150 aaKnown RBP11.75□□□□□ -0.53
SMARCA4-214ENST00000589677 DOCK11Q5JSL3 2073 aa11.75□□□□□ -0.53
SMARCA4-214ENST00000589677 MYLKQ15746 1914 aa11.75□□□□□ -0.53
SMARCA4-214ENST00000589677 BUB1B-PAK6H3BSN5 160 aa11.75□□□□□ -0.53
SMARCA4-214ENST00000589677 ERCC8Q13216 396 aa11.75□□□□□ -0.53
SMARCA4-214ENST00000589677 TRPT1Q86TN4 253 aaKnown RBP11.75□□□□□ -0.53
SMARCA4-214ENST00000589677 MDC1Q14676 2089 aaKnown RBP11.75□□□□□ -0.53
SMARCA4-214ENST00000589677 PRR25Q96S07 402 aa11.75□□□□□ -0.53
SMARCA4-214ENST00000589677 IGFL4Q6B9Z1 124 aa11.75□□□□□ -0.53
SMARCA4-214ENST00000589677 THAP8Q8NA92 274 aa11.75□□□□□ -0.53
SMARCA4-214ENST00000589677 RNF166Q96A37 237 aaPredicted RBP11.75□□□□□ -0.53
SMARCA4-214ENST00000589677 LAMTOR3Q9UHA4 124 aa11.75□□□□□ -0.53
SMARCA4-214ENST00000589677 TRAV41A0A0B4J266 112 aa11.74□□□□□ -0.53
SMARCA4-214ENST00000589677 NDUFB8O95169 186 aa11.74□□□□□ -0.53
SMARCA4-214ENST00000589677 ANKRD29Q8N6D5 301 aa11.74□□□□□ -0.53
SMARCA4-214ENST00000589677 PCP2Q8IVA1 136 aa11.74□□□□□ -0.53
SMARCA4-214ENST00000589677 WFDC12Q8WWY7 111 aa11.74□□□□□ -0.53
SMARCA4-214ENST00000589677 FAM168AQ92567 244 aa11.74□□□□□ -0.53
SMARCA4-214ENST00000589677 MINOS1Q5TGZ0 78 aa11.74□□□□□ -0.53
SMARCA4-214ENST00000589677 SH2D6Q7Z4S9 175 aa11.74□□□□□ -0.53
SMARCA4-214ENST00000589677 Q8NFD4 153 aa11.74□□□□□ -0.53
SMARCA4-214ENST00000589677 NTN5Q8WTR8 489 aaPredicted RBP11.74□□□□□ -0.53
SMARCA4-214ENST00000589677 ZC2HC1AQ96GY0 325 aa11.74□□□□□ -0.53
SMARCA4-214ENST00000589677 MINOS1-NBL1R4GNA1 71 aa11.74□□□□□ -0.53
SMARCA4-214ENST00000589677 PRIMA1Q86XR5 153 aa11.74□□□□□ -0.53
SMARCA4-214ENST00000589677 AHCTF1Q8WYP5 2266 aa11.73□□□□□ -0.53
SMARCA4-214ENST00000589677 CARD19Q96LW7 228 aa11.73□□□□□ -0.53
SMARCA4-214ENST00000589677 SMIM2Q9BVW6 85 aa11.73□□□□□ -0.53
SMARCA4-214ENST00000589677 TSC2P49815 1807 aa11.73□□□□□ -0.53
SMARCA4-214ENST00000589677 K7EM74 188 aa11.73□□□□□ -0.53
SMARCA4-214ENST00000589677 RSPO1Q2MKA7 263 aaPredicted RBP11.73□□□□□ -0.53
SMARCA4-214ENST00000589677 SMIM20Q8N5G0 67 aa11.73□□□□□ -0.53
SMARCA4-214ENST00000589677 JPT2Q9H910 190 aa11.73□□□□□ -0.53
SMARCA4-214ENST00000589677 ACYP1P07311 99 aa11.72□□□□□ -0.53
SMARCA4-214ENST00000589677 HIGD1BQ9P298 99 aa11.72□□□□□ -0.53
SMARCA4-214ENST00000589677 TRBV25-1A0A075B6N4 114 aa11.72□□□□□ -0.53
SMARCA4-214ENST00000589677 MORN5Q5VZ52 161 aa11.72□□□□□ -0.53
SMARCA4-214ENST00000589677 ZNF833PQ6ZTB9 187 aa11.72□□□□□ -0.53
SMARCA4-214ENST00000589677 DTX2Q86UW9 622 aa11.72□□□□□ -0.53
SMARCA4-214ENST00000589677 WDR81Q562E7 1941 aa11.72□□□□□ -0.53
SMARCA4-214ENST00000589677 H3BRN7 92 aa11.72□□□□□ -0.53
SMARCA4-214ENST00000589677 RPL36AP83881 106 aaKnown RBP11.72□□□□□ -0.53
SMARCA4-214ENST00000589677 KLRD1Q13241 179 aa11.72□□□□□ -0.53
SMARCA4-214ENST00000589677 RPL36ALQ969Q0 106 aaKnown RBP11.72□□□□□ -0.53
SMARCA4-214ENST00000589677 C20orf78Q9BR46 151 aa11.72□□□□□ -0.53
SMARCA4-214ENST00000589677 NTN3O00634 580 aaPredicted RBP11.72□□□□□ -0.53
SMARCA4-214ENST00000589677 LYPD6Q86Y78 171 aa11.72□□□□□ -0.53
SMARCA4-214ENST00000589677 C8orf86Q6ZUL3 223 aa11.71□□□□□ -0.53
SMARCA4-214ENST00000589677 DEFB104AQ8WTQ1 72 aa11.71□□□□□ -0.53
SMARCA4-214ENST00000589677 IL17RELQ6ZVW7 336 aa11.71□□□□□ -0.53
SMARCA4-214ENST00000589677 TMEM126AQ9H061 195 aa11.71□□□□□ -0.53
SMARCA4-214ENST00000589677 K7EMI3 77 aa11.71□□□□□ -0.54
SMARCA4-214ENST00000589677 CFC1BP0CG36 223 aa11.71□□□□□ -0.54
SMARCA4-214ENST00000589677 CFC1P0CG37 223 aa11.71□□□□□ -0.54
SMARCA4-214ENST00000589677 ATP5J2P56134 94 aa11.71□□□□□ -0.54
SMARCA4-214ENST00000589677 POU2AF1Q16633 256 aa11.71□□□□□ -0.54
SMARCA4-214ENST00000589677 A0A087WWL8 130 aa11.71□□□□□ -0.54
SMARCA4-214ENST00000589677 ZNF415Q09FC8 603 aa11.71□□□□□ -0.54
SMARCA4-214ENST00000589677 ZNF524Q96C55 264 aa11.71□□□□□ -0.54
SMARCA4-214ENST00000589677 J3QQQ9 107 aa11.7□□□□□ -0.54
SMARCA4-214ENST00000589677 STHQ8IWL8 128 aa11.7□□□□□ -0.54
SMARCA4-214ENST00000589677 CHCHD5Q9BSY4 110 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms