RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	EBLN2	Q6P2I7	272 aa		12.09	□□□□□ -0.47
DDX39A-209	ENST00000589318	TMEM191A	Q9H0A3	160 aa		12.09	□□□□□ -0.47
DDX39A-209	ENST00000589318	NPIPB5	A8MRT5	1133 aa		12.09	□□□□□ -0.47
DDX39A-209	ENST00000589318		I3L2K1	104 aa		12.09	□□□□□ -0.47
DDX39A-209	ENST00000589318		J3QLI3	93 aa		12.09	□□□□□ -0.47
DDX39A-209	ENST00000589318	OR7C2	O60412	319 aa		12.09	□□□□□ -0.47
DDX39A-209	ENST00000589318	SMIM17	P0DL12	118 aa		12.09	□□□□□ -0.47
DDX39A-209	ENST00000589318	C5orf56	Q8N8D9	126 aa		12.09	□□□□□ -0.47
DDX39A-209	ENST00000589318	TMEM116	Q8NCL8	245 aa		12.09	□□□□□ -0.47
DDX39A-209	ENST00000589318	IGHV3-21	A0A0B4J1V1	117 aa		12.08	□□□□□ -0.48
DDX39A-209	ENST00000589318	OR4C46	A6NHA9	309 aa		12.08	□□□□□ -0.48
DDX39A-209	ENST00000589318	TMEM219	Q86XT9	240 aa		12.08	□□□□□ -0.48
DDX39A-209	ENST00000589318	FER1L6-AS1	Q8NA97	138 aa		12.08	□□□□□ -0.48
DDX39A-209	ENST00000589318	CHCHD1	Q96BP2	118 aa	Known RBP	12.08	□□□□□ -0.48
DDX39A-209	ENST00000589318	ITPR2	Q14571	2701 aa		12.08	□□□□□ -0.48
DDX39A-209	ENST00000589318	UNC79	Q9P2D8	2635 aa		12.08	□□□□□ -0.48
DDX39A-209	ENST00000589318	ITPR3	Q14573	2671 aa		12.08	□□□□□ -0.48
DDX39A-209	ENST00000589318	PSMB11	A5LHX3	300 aa		12.07	□□□□□ -0.48
DDX39A-209	ENST00000589318	GAGE10	A6NGK3	116 aa		12.07	□□□□□ -0.48
DDX39A-209	ENST00000589318		K7EIM0	57 aa		12.07	□□□□□ -0.48
DDX39A-209	ENST00000589318	OR5AL1	P0C617	328 aa		12.07	□□□□□ -0.48
DDX39A-209	ENST00000589318	FRMD6-AS1	P0C7T7	363 aa		12.07	□□□□□ -0.48
DDX39A-209	ENST00000589318	PSG3	Q16557	428 aa		12.07	□□□□□ -0.48
DDX39A-209	ENST00000589318	IBA57	Q5T440	356 aa	Known RBP	12.07	□□□□□ -0.48
DDX39A-209	ENST00000589318	ATP5L2	Q7Z4Y8	100 aa		12.07	□□□□□ -0.48
DDX39A-209	ENST00000589318	TTC9C	Q8N5M4	171 aa		12.07	□□□□□ -0.48
DDX39A-209	ENST00000589318	FANCD2OS	Q96PS1	177 aa		12.07	□□□□□ -0.48
DDX39A-209	ENST00000589318	RASL11B	Q9BPW5	248 aa		12.07	□□□□□ -0.48
DDX39A-209	ENST00000589318	TNFRSF19	Q9NS68	423 aa		12.07	□□□□□ -0.48
DDX39A-209	ENST00000589318	TEX15	Q9BXT5	2789 aa		12.07	□□□□□ -0.48
DDX39A-209	ENST00000589318	TCRBV4S1A1T	A0A5B7	111 aa		12.07	□□□□□ -0.48
DDX39A-209	ENST00000589318	SPATA31B1P	Q5VZV4	182 aa		12.07	□□□□□ -0.48
DDX39A-209	ENST00000589318	FAM231D	Q6ZW35	169 aa		12.07	□□□□□ -0.48
DDX39A-209	ENST00000589318	IGLV11-55	A0A075B6I3	123 aa		12.06	□□□□□ -0.48
DDX39A-209	ENST00000589318	MUC21	A0A0G2JKD1	596 aa		12.06	□□□□□ -0.48
DDX39A-209	ENST00000589318	MUC21	A0A140T8X8	626 aa		12.06	□□□□□ -0.48
DDX39A-209	ENST00000589318	FSHB	P01225	129 aa		12.06	□□□□□ -0.48
DDX39A-209	ENST00000589318	MUC21	Q5SSG8	566 aa		12.06	□□□□□ -0.48
DDX39A-209	ENST00000589318	MOB4	Q9Y3A3	225 aa		12.06	□□□□□ -0.48
DDX39A-209	ENST00000589318	SH2D7	A6NKC9	451 aa	Predicted RBP	12.05	□□□□□ -0.48
DDX39A-209	ENST00000589318	LINC01548	A6NM66	108 aa		12.05	□□□□□ -0.48
DDX39A-209	ENST00000589318	UFSP1	Q6NVU6	142 aa		12.05	□□□□□ -0.48
DDX39A-209	ENST00000589318	PQLC2	Q6ZP29	291 aa		12.05	□□□□□ -0.48
DDX39A-209	ENST00000589318	C19orf24	Q9BVV8	132 aa		12.05	□□□□□ -0.48
DDX39A-209	ENST00000589318	SCRT2	Q9NQ03	307 aa		12.05	□□□□□ -0.48
DDX39A-209	ENST00000589318		A6NDX4	124 aa		12.05	□□□□□ -0.48
DDX39A-209	ENST00000589318	ATP6V0E1	O15342	81 aa		12.05	□□□□□ -0.48
DDX39A-209	ENST00000589318	WFDC11	Q8NEX6	87 aa		12.05	□□□□□ -0.48
DDX39A-209	ENST00000589318	AP1S3	Q96PC3	154 aa		12.05	□□□□□ -0.48
DDX39A-209	ENST00000589318	TRGV9	Q99603	122 aa		12.05	□□□□□ -0.48
DDX39A-209	ENST00000589318	SYS1-DBNDD2	H3BUS1	97 aa		12.04	□□□□□ -0.48
DDX39A-209	ENST00000589318		H3BUX3	64 aa		12.04	□□□□□ -0.48
DDX39A-209	ENST00000589318	SLA	Q13239	276 aa		12.04	□□□□□ -0.48
DDX39A-209	ENST00000589318	BCL6B	Q8N143	479 aa	Predicted RBP	12.04	□□□□□ -0.48
DDX39A-209	ENST00000589318	RNASEK	Q6P5S7	137 aa	Known RBP	12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	OR5A1	Q8NGJ0	315 aa		12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	GRAMD2B	Q96HH9	432 aa		12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	RNASE7	Q9H1E1	156 aa	Known RBP	12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	CCDC168	Q8NDH2	2452 aa		12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	AKAP9	Q99996	3911 aa		12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318		A0A1W2PRE2	83 aa		12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318		A6NDN8	102 aa		12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318		H3BRM9	83 aa		12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	SPINK4	O60575	86 aa		12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	S100A7	P31151	101 aa		12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	GPR183	P32249	361 aa		12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	LY6E	Q16553	131 aa		12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	KLK9	Q2XQG4	91 aa		12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	PATE2	Q6UY27	113 aa		12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	MIR17HG	Q75NE6	70 aa		12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	CIART	Q8N365	385 aa	Predicted RBP	12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	DPF1	Q92782	380 aa		12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	TECR	Q9NZ01	308 aa	Known RBP	12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	KLK9	Q9UKQ9	250 aa		12.03	□□□□□ -0.48
DDX39A-209	ENST00000589318	MXRA5	Q9NR99	2828 aa		12.02	□□□□□ -0.48
DDX39A-209	ENST00000589318	TRAV8-6	A0A0B4J262	113 aa		12.02	□□□□□ -0.49
DDX39A-209	ENST00000589318	C7orf71	A4D174	169 aa		12.02	□□□□□ -0.49
DDX39A-209	ENST00000589318	DEFB112	Q30KQ8	113 aa		12.02	□□□□□ -0.49
DDX39A-209	ENST00000589318	SAMD13	Q5VXD3	122 aa		12.02	□□□□□ -0.49
DDX39A-209	ENST00000589318	NEGR1	Q7Z3B1	354 aa		12.02	□□□□□ -0.49
DDX39A-209	ENST00000589318	OR1B1	Q8NGR6	318 aa		12.02	□□□□□ -0.49
DDX39A-209	ENST00000589318	FAM110D	Q8TAY7	271 aa	Predicted RBP	12.02	□□□□□ -0.49
DDX39A-209	ENST00000589318	IGF2BP2-AS1	Q96M15	143 aa		12.02	□□□□□ -0.49
DDX39A-209	ENST00000589318	SMPX	Q9UHP9	88 aa		12.02	□□□□□ -0.49
DDX39A-209	ENST00000589318	IGKV1-17	P01599	117 aa		12.01	□□□□□ -0.49
DDX39A-209	ENST00000589318	RIPPLY3	P57055	190 aa		12.01	□□□□□ -0.49
DDX39A-209	ENST00000589318	TAS2R45	P59539	299 aa		12.01	□□□□□ -0.49
DDX39A-209	ENST00000589318	MORN5	Q5VZ52	161 aa		12.01	□□□□□ -0.49
DDX39A-209	ENST00000589318	SERTAD4	Q9NUC0	356 aa		12.01	□□□□□ -0.49
DDX39A-209	ENST00000589318		A0A1B0GV72	72 aa		12.01	□□□□□ -0.49
DDX39A-209	ENST00000589318	C9orf118	A6NHY6	69 aa		12.01	□□□□□ -0.49
DDX39A-209	ENST00000589318		F8W735	103 aa	Predicted RBP	12.01	□□□□□ -0.49
DDX39A-209	ENST00000589318	IGLV2-8	P01709	118 aa		12.01	□□□□□ -0.49
DDX39A-209	ENST00000589318	CRIP2	P52943	208 aa	Predicted RBP	12.01	□□□□□ -0.49
DDX39A-209	ENST00000589318	TCL1A	P56279	114 aa		12.01	□□□□□ -0.49
DDX39A-209	ENST00000589318	ECSCR	Q19T08	205 aa		12.01	□□□□□ -0.49
DDX39A-209	ENST00000589318	C19orf54	Q5BKX5	351 aa		12.01	□□□□□ -0.49
DDX39A-209	ENST00000589318	NHLRC2	Q8NBF2	726 aa		12.01	□□□□□ -0.49
DDX39A-209	ENST00000589318	ZNF503	Q96F45	646 aa		12.01	□□□□□ -0.49
DDX39A-209	ENST00000589318	TMUB1	Q9BVT8	246 aa		12.01	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms