RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 PRSS22Q9GZN4 317 aa7.75□□□□□ -1.17
VPS25-202ENST00000589219 S4R3C0 116 aa7.75□□□□□ -1.17
VPS25-202ENST00000589219 CUBNO60494 3623 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 A0A087X0K7 114 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 TRAV20A0A0B4J274 112 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 A0A1B0GXF2 115 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 HIGD1CA8MV81 97 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 DIRC3C9JPN6 131 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 H3BUA1 57 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 M0QZK8 103 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 CA1P00915 261 aaPredicted RBP7.74□□□□□ -1.17
VPS25-202ENST00000589219 IGLV2-11P01706 119 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 APCSP02743 223 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 CTSGP08311 255 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 SRD5A1P18405 259 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 GPR183P32249 361 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 RAB4BP61018 213 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 RELQ04864 619 aaPredicted RBP7.74□□□□□ -1.17
VPS25-202ENST00000589219 PSG3Q16557 428 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 IQCJQ1A5X6 159 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 C16orf54Q6UWD8 224 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 PRNTQ86SH4 94 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 BAGE3Q86Y29 109 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 PSG8Q9UQ74 426 aa7.74□□□□□ -1.17
VPS25-202ENST00000589219 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.73□□□□□ -1.173e-7■■■□□ 17.2
VPS25-202ENST00000589219 TRAV41A0A0B4J266 112 aa7.73□□□□□ -1.17
VPS25-202ENST00000589219 GRIFINA4D1Z8 144 aa7.73□□□□□ -1.17
VPS25-202ENST00000589219 B4DSR2 109 aa7.73□□□□□ -1.17
VPS25-202ENST00000589219 BRI3O95415 125 aa7.73□□□□□ -1.17
VPS25-202ENST00000589219 IGHV3-23P01764 117 aa7.73□□□□□ -1.17
VPS25-202ENST00000589219 HBBP68871 147 aa7.73□□□□□ -1.17
VPS25-202ENST00000589219 C19orf54Q5BKX5 351 aa7.73□□□□□ -1.17
VPS25-202ENST00000589219 Q6AWC8 147 aa7.73□□□□□ -1.17
VPS25-202ENST00000589219 RBPMS2Q6ZRY4 209 aaKnown RBP7.73□□□□□ -1.17
VPS25-202ENST00000589219 KCNS1Q96KK3 526 aa7.73□□□□□ -1.17
VPS25-202ENST00000589219 ZFAND3Q9H8U3 227 aa7.73□□□□□ -1.17
VPS25-202ENST00000589219 TP53TG3Q9ULZ0 132 aa7.73□□□□□ -1.17
VPS25-202ENST00000589219 STAB1Q9NY15 2570 aa7.73□□□□□ -1.17
VPS25-202ENST00000589219 TRAV8-1A0A0A6YYK1 113 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 TSTD3H0UI37 97 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 SPINK4O60575 86 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 SERF1AO75920 110 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 TGFAP01135 160 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 CT45A10P0DMU9 189 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 GZMBP10144 247 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 SRIP30626 198 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 PKIAP61925 76 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 SLC35B1P78383 322 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 C1orf194Q5T5A4 169 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 COX8CQ7Z4L0 72 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 TMEM256Q8N2U0 113 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 SGK494Q96LW2 274 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 CCDC140Q96MF4 163 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 SLC50A1Q9BRV3 221 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 PRDM13Q9H4Q3 707 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 GNB4Q9HAV0 340 aa7.72□□□□□ -1.17
VPS25-202ENST00000589219 A0A1B0GUS0 222 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 A0A1B0GW15 77 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 A6NDX4 124 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 LINC00587B1AMM8 73 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 J3QLI3 93 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 IGF1P05019 195 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 FRMD6-AS1P0C7T7 363 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 LINC00310P59036 64 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 ATP5G2Q06055 141 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 KLF5Q13887 457 aaPredicted RBP7.71□□□□□ -1.18
VPS25-202ENST00000589219 SAPCD1Q5SSQ6 148 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 FAM162BQ5T6X4 162 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 TOMM20LQ6UXN7 152 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 LINC00322Q6ZN03 302 aaPredicted RBP7.71□□□□□ -1.18
VPS25-202ENST00000589219 OR2D3Q8NGH3 330 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 PIFOQ8TCI5 191 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 C17orf77Q96MU5 243 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 MS4A10Q96PG2 267 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 SAMD10Q9BYL1 202 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 ZNF580Q9UK33 172 aa7.71□□□□□ -1.18
VPS25-202ENST00000589219 ANK3Q12955 4377 aaKnown RBP7.71□□□□□ -1.18
VPS25-202ENST00000589219 PLXNB1O43157 2135 aa7.7□□□□□ -1.18
VPS25-202ENST00000589219 IGHV3OR16-10A0A075B7F0 116 aa7.7□□□□□ -1.18
VPS25-202ENST00000589219 G3V318 75 aa7.7□□□□□ -1.18
VPS25-202ENST00000589219 IGHV4-38-2P0DP08 117 aa7.7□□□□□ -1.18
VPS25-202ENST00000589219 CTAG1AP78358 180 aa7.7□□□□□ -1.18
VPS25-202ENST00000589219 SLAQ13239 276 aa7.7□□□□□ -1.18
VPS25-202ENST00000589219 CDPF1Q6NVV7 123 aa7.7□□□□□ -1.18
VPS25-202ENST00000589219 BRD3OSQ6XYD6 125 aa7.7□□□□□ -1.18
VPS25-202ENST00000589219 TCF24Q7RTU0 167 aa7.7□□□□□ -1.18
VPS25-202ENST00000589219 TMEM219Q86XT9 240 aa7.7□□□□□ -1.18
VPS25-202ENST00000589219 LINC01356Q8N9X3 169 aa7.7□□□□□ -1.18
VPS25-202ENST00000589219 GATD1Q8NB37 220 aa7.7□□□□□ -1.18
VPS25-202ENST00000589219 MRPL53Q96EL3 112 aaKnown RBP7.7□□□□□ -1.18
VPS25-202ENST00000589219 ZC2HC1AQ96GY0 325 aa7.7□□□□□ -1.18
VPS25-202ENST00000589219 METTL26Q96S19 204 aa7.7□□□□□ -1.18
VPS25-202ENST00000589219 NDFIP1Q9BT67 221 aa7.7□□□□□ -1.18
VPS25-202ENST00000589219 RBAKDNA6NC62 111 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 M0R3E3 92 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 CHEK1O14757 476 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 BUB3O43684 328 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 IGHG2P01859 326 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 CLEC3BP05452 202 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 FOXA3P55318 350 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms