RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 RPL11P62913 178 aaKnown RBP7.99□□□□□ -1.13
CHMP1B-202ENST00000588284 ADIRFQ15847 76 aa7.99□□□□□ -1.13
CHMP1B-202ENST00000588284 ATRAIDQ6UW56 229 aa7.99□□□□□ -1.13
CHMP1B-202ENST00000588284 TCF24Q7RTU0 167 aa7.99□□□□□ -1.13
CHMP1B-202ENST00000588284 BAGE2Q86Y30 109 aa7.99□□□□□ -1.13
CHMP1B-202ENST00000588284 OCC1Q8TAD7 63 aa7.99□□□□□ -1.13
CHMP1B-202ENST00000588284 SMIM12Q96EX1 92 aa7.99□□□□□ -1.13
CHMP1B-202ENST00000588284 C16orf92Q96LL3 132 aa7.99□□□□□ -1.13
CHMP1B-202ENST00000588284 CITED2Q99967 270 aaPredicted RBP7.99□□□□□ -1.13
CHMP1B-202ENST00000588284 SMCO4Q9NRQ5 59 aa7.99□□□□□ -1.13
CHMP1B-202ENST00000588284 TMEM242Q9NWH2 141 aa7.99□□□□□ -1.13
CHMP1B-202ENST00000588284 MXRA5Q9NR99 2828 aa7.99□□□□□ -1.13
CHMP1B-202ENST00000588284 TMEM213A2RRL7 107 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 C2orf70A6NJV1 201 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 DIRC3C9JPN6 131 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 FOLR2P14207 255 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 ID1P41134 155 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 SLURP1P55000 103 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 GNG5P63218 68 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 PAFAH1B2P68402 229 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 PSG3Q16557 428 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 LCN12Q6JVE5 192 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 C18orf65Q6ZTR6 163 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 C8orf86Q6ZUL3 223 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 LINC01551Q86U37 167 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 NDUFA11Q86Y39 141 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 OR9G4Q8NGQ1 327 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 ANAPC16Q96DE5 110 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 DERL1Q9BUN8 251 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 TUBA4BQ9H853 241 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 NRN1Q9NPD7 142 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 MLXQ9UH92 298 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 RPH3ALQ9UNE2 315 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 ZFP30Q9Y2G7 519 aa7.98□□□□□ -1.13
CHMP1B-202ENST00000588284 CXorf65A6NEN9 183 aa7.97□□□□□ -1.13
CHMP1B-202ENST00000588284 SLC17A3O00476 420 aa7.97□□□□□ -1.13
CHMP1B-202ENST00000588284 ISLRO14498 428 aa7.97□□□□□ -1.13
CHMP1B-202ENST00000588284 TSPAN4O14817 238 aa7.97□□□□□ -1.13
CHMP1B-202ENST00000588284 BTN1A1Q13410 526 aa7.97□□□□□ -1.13
CHMP1B-202ENST00000588284 DEFB136Q30KP8 78 aa7.97□□□□□ -1.13
CHMP1B-202ENST00000588284 CENPWQ5EE01 88 aa7.97□□□□□ -1.13
CHMP1B-202ENST00000588284 GOLT1AQ6ZVE7 132 aa7.97□□□□□ -1.13
CHMP1B-202ENST00000588284 C11orf44Q8N8P7 122 aa7.97□□□□□ -1.13
CHMP1B-202ENST00000588284 TMEM75Q8N9X5 138 aa7.97□□□□□ -1.13
CHMP1B-202ENST00000588284 DLX4Q92988 240 aaPredicted RBP7.97□□□□□ -1.13
CHMP1B-202ENST00000588284 LINC00479Q96M42 142 aa7.97□□□□□ -1.13
CHMP1B-202ENST00000588284 TRAV34A0A0B4J273 112 aa7.96□□□□□ -1.14
CHMP1B-202ENST00000588284 A0A1W2PRX2 142 aa7.96□□□□□ -1.14
CHMP1B-202ENST00000588284 RBAKDNA6NC62 111 aa7.96□□□□□ -1.14
CHMP1B-202ENST00000588284 DNASE2O00115 360 aaPredicted RBP7.96□□□□□ -1.14
CHMP1B-202ENST00000588284 OVOL1O14753 267 aa7.96□□□□□ -1.14
CHMP1B-202ENST00000588284 EREGO14944 169 aa7.96□□□□□ -1.14
CHMP1B-202ENST00000588284 SCO1O75880 301 aa7.96□□□□□ -1.14
CHMP1B-202ENST00000588284 GCGP01275 180 aa7.96□□□□□ -1.14
CHMP1B-202ENST00000588284 FLI1Q01543 452 aaPredicted RBP7.96□□□□□ -1.14
CHMP1B-202ENST00000588284 FHL3Q13643 280 aa7.96□□□□□ -1.14
CHMP1B-202ENST00000588284 SAPCD1Q5SSQ6 148 aa7.96□□□□□ -1.14
CHMP1B-202ENST00000588284 C15orf54Q8N8G6 183 aa7.96□□□□□ -1.14
CHMP1B-202ENST00000588284 ISOC2Q96AB3 205 aa7.96□□□□□ -1.14
CHMP1B-202ENST00000588284 RAX2Q96IS3 184 aa7.96□□□□□ -1.14
CHMP1B-202ENST00000588284 PSG8Q9UQ74 426 aa7.96□□□□□ -1.14
CHMP1B-202ENST00000588284 TRBV20OR9-2A0A075B6H5 130 aa7.95□□□□□ -1.14
CHMP1B-202ENST00000588284 H7BYZ3 331 aa7.95□□□□□ -1.14
CHMP1B-202ENST00000588284 M0R3E3 92 aa7.95□□□□□ -1.14
CHMP1B-202ENST00000588284 LTAP01374 205 aa7.95□□□□□ -1.14
CHMP1B-202ENST00000588284 RNF212Q495C1 297 aa7.95□□□□□ -1.14
CHMP1B-202ENST00000588284 TMEM183AQ8IXX5 376 aa7.95□□□□□ -1.14
CHMP1B-202ENST00000588284 OR10G8Q8NGN5 311 aa7.95□□□□□ -1.14
CHMP1B-202ENST00000588284 IGF2BP2-AS1Q96M15 143 aa7.95□□□□□ -1.14
CHMP1B-202ENST00000588284 OSTCQ9NRP0 149 aa7.95□□□□□ -1.14
CHMP1B-202ENST00000588284 SIGLEC8Q9NYZ4 499 aa7.95□□□□□ -1.14
CHMP1B-202ENST00000588284 ANK3Q12955 4377 aaKnown RBP7.95□□□□□ -1.14
CHMP1B-202ENST00000588284 ZNF469Q96JG9 3925 aaPredicted RBP7.94□□□□□ -1.14
CHMP1B-202ENST00000588284 TRAV2A0A0B4J234 112 aa7.94□□□□□ -1.14
CHMP1B-202ENST00000588284 TRAV8-2A0A0B4J237 113 aa7.94□□□□□ -1.14
CHMP1B-202ENST00000588284 TRAV25A0A0B4J276 109 aa7.94□□□□□ -1.14
CHMP1B-202ENST00000588284 CSN3P07498 182 aa7.94□□□□□ -1.14
CHMP1B-202ENST00000588284 MGST1P10620 155 aaKnown RBP7.94□□□□□ -1.14
CHMP1B-202ENST00000588284 RBPMS2Q6ZRY4 209 aaKnown RBP7.94□□□□□ -1.14
CHMP1B-202ENST00000588284 PRNTQ86SH4 94 aa7.94□□□□□ -1.14
CHMP1B-202ENST00000588284 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.94□□□□□ -1.14
CHMP1B-202ENST00000588284 DYNLRB2Q8TF09 96 aa7.94□□□□□ -1.14
CHMP1B-202ENST00000588284 DAZAP1Q96EP5 407 aaKnown RBP7.94□□□□□ -1.14
CHMP1B-202ENST00000588284 SFRP2Q96HF1 295 aa7.94□□□□□ -1.14
CHMP1B-202ENST00000588284 LINC00477Q96M19 166 aa7.94□□□□□ -1.14
CHMP1B-202ENST00000588284 DUX3Q96PT4 197 aa7.94□□□□□ -1.14
CHMP1B-202ENST00000588284 NDFIP1Q9BT67 221 aa7.94□□□□□ -1.14
CHMP1B-202ENST00000588284 MLST8Q9BVC4 326 aa7.94□□□□□ -1.14
CHMP1B-202ENST00000588284 SVEP1Q4LDE5 3571 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 PGPEP1LA6NFU8 196 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 ZNF705FA8MVS1 300 aaPredicted RBP7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 SOCS3O14543 225 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 IGLV2-11P01706 119 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 IGLV2-8P01709 118 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 S100PP25815 95 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 HLA-DMBP28068 263 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 ERVFC1-1P60608 527 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 SNRPD3P62318 126 aaKnown RBP7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 SRSF2Q01130 221 aaKnown RBP7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 NSUN5P1Q3KNT7 163 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms