RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	MGST2	Q99735	147 aa		11.35	□□□□□ -0.59
PRKAR1A-206	ENST00000585460	KRTAP1-5	Q9BYS1	174 aa		11.35	□□□□□ -0.59
PRKAR1A-206	ENST00000585460		A0A0J9YY99	117 aa		11.34	□□□□□ -0.59
PRKAR1A-206	ENST00000585460	GAGE12B	A1L429	117 aa		11.34	□□□□□ -0.59
PRKAR1A-206	ENST00000585460	COX7A2P2	O60397	106 aa		11.34	□□□□□ -0.59
PRKAR1A-206	ENST00000585460	GAGE7	O76087	117 aa		11.34	□□□□□ -0.59
PRKAR1A-206	ENST00000585460	GAGE12F	P0CL80	117 aa		11.34	□□□□□ -0.59
PRKAR1A-206	ENST00000585460	GAGE12G	P0CL81	117 aa		11.34	□□□□□ -0.59
PRKAR1A-206	ENST00000585460	GAGE12I	P0CL82	117 aa		11.34	□□□□□ -0.59
PRKAR1A-206	ENST00000585460	IGLC2	P0DOY2	106 aa		11.34	□□□□□ -0.59
PRKAR1A-206	ENST00000585460	MITD1	Q8WV92	249 aa		11.34	□□□□□ -0.59
PRKAR1A-206	ENST00000585460	DNAJC4	Q9NNZ3	241 aa		11.34	□□□□□ -0.59
PRKAR1A-206	ENST00000585460	TRAV5	A0A0B4J249	113 aa		11.33	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	C10orf113	Q5VZT2	155 aa		11.33	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	TRIQK	Q629K1	86 aa		11.33	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	SPATA12	Q7Z6I5	190 aa		11.33	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	MAPKAPK5-AS1	Q8N8E1	139 aa		11.33	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	ZNF431	Q8TF32	576 aa	Predicted RBP	11.33	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	RBM38	Q9H0Z9	239 aa	Known RBP	11.33	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	PXMP4	Q9Y6I8	212 aa		11.33	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	TRAV12-3	A0A0B4J271	114 aa		11.32	□□□□□ -0.6
PRKAR1A-206	ENST00000585460		J3KRW8	73 aa		11.32	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	DNAH5	Q8TE73	4624 aa		11.31	□□□□□ -0.6
PRKAR1A-206	ENST00000585460		H3BNG1	76 aa		11.31	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	RLN2	P04090	185 aa		11.31	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	CAMLG	P49069	296 aa		11.31	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	UPK3B	Q9BT76	320 aa		11.31	□□□□□ -0.6
PRKAR1A-206	ENST00000585460		Q9H3A6	140 aa		11.31	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	CENPX	A8MT69	81 aa		11.3	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	SNURFL	B1AK76	121 aa		11.3	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	NPIPB6	E9PJ23	425 aa		11.3	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	KRTAP10-2	P60368	255 aa		11.3	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	DAZ2	Q13117	558 aa	Known RBP	11.3	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	MIC13	Q5XKP0	118 aa		11.3	□□□□□ -0.6
PRKAR1A-206	ENST00000585460		Q6ZRG5	221 aa		11.3	□□□□□ -0.6
PRKAR1A-206	ENST00000585460		Q6ZTI0	123 aa		11.3	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	NRARP	Q7Z6K4	114 aa		11.3	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	ODF3	Q96PU9	254 aa		11.3	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	ZNF586	Q9NXT0	402 aa		11.3	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	FAM24A	A6NFZ4	105 aa		11.29	□□□□□ -0.6
PRKAR1A-206	ENST00000585460		L7N2F9	121 aa		11.29	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	CCS	O14618	274 aa		11.29	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	CST7	O76096	145 aa		11.29	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	LEP	P41159	167 aa		11.29	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	VAMP2	P63027	116 aa		11.29	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	RAB31	Q13636	194 aa		11.29	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	GUK1	Q16774	197 aa		11.29	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	TTC32	Q5I0X7	151 aa		11.29	□□□□□ -0.6
PRKAR1A-206	ENST00000585460		Q8N1X5	172 aa		11.29	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	VSIG2	Q96IQ7	327 aa		11.29	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	PYGO2	Q9BRQ0	406 aa		11.29	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	TMPRSS5	Q9H3S3	457 aa		11.29	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	C11orf1	Q9H5F2	150 aa		11.29	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	MRPS16	Q9Y3D3	137 aa	Known RBP	11.29	□□□□□ -0.6
PRKAR1A-206	ENST00000585460		A0A1W2PPQ1	181 aa		11.28	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	PLA2G10	O15496	165 aa		11.28	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	BCAP31	P51572	246 aa		11.28	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	ERCC8	Q13216	396 aa		11.28	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	CNPY1	Q3B7I2	92 aa		11.28	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	GSN-AS1	Q9NRJ2	163 aa		11.28	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	WDR83OS	Q9Y284	106 aa		11.28	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	LSM5	Q9Y4Y9	91 aa	Known RBP	11.28	□□□□□ -0.6
PRKAR1A-206	ENST00000585460	ZNF324	O75467	553 aa	Predicted RBP	11.27	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	IL7	P13232	177 aa		11.27	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	BTF3	P20290	206 aa	Known RBP	11.27	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	ZNF846	Q147U1	533 aa		11.27	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	OR1L4	Q8NGR5	311 aa		11.27	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	APOB	P04114	4563 aa	Known RBP	11.27	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	TRBV19	A0A075B6N1	114 aa		11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460		A0A096LPF7	62 aa		11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	FAM25E	A8MYX2	175 aa		11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460		M0R3E3	92 aa		11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	ZNF253	O75346	499 aa		11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	NDUFB4	O95168	129 aa		11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	SLC25A5	P05141	298 aa	Known RBP	11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	RPL29	P47914	159 aa	Known RBP	11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	CAV2	P51636	162 aa		11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	CD300C	Q08708	224 aa		11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	VWC2	Q2TAL6	325 aa		11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	C11orf72	Q8NBR9	251 aa		11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	FAM19A4	Q96LR4	140 aa		11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	AGPAT4-IT1	Q9H0P7	198 aa		11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	SCRT2	Q9NQ03	307 aa		11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	SLC39A9	Q9NUM3	307 aa		11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	UQCC1	Q9NVA1	299 aa		11.26	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	C7orf71	A4D174	169 aa		11.25	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.25	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	CHAC2	Q8WUX2	184 aa		11.25	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	MRPL53	Q96EL3	112 aa	Known RBP	11.25	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	LINC00477	Q96M19	166 aa		11.25	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	C18orf15	Q96N68	181 aa		11.25	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	PFDN5	Q99471	154 aa		11.25	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	LINC00467	Q9BRT7	94 aa		11.25	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	C20orf85	Q9H1P6	137 aa		11.25	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	TRGV2	A0A075B6R0	118 aa		11.24	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	C5orf51	A6NDU8	294 aa		11.24	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	KLLN	B2CW77	178 aa		11.24	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	TCRB	P04435	133 aa		11.24	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	HIST1H1E	P10412	219 aa	Known RBP	11.24	□□□□□ -0.61
PRKAR1A-206	ENST00000585460	RNASE4	P34096	147 aa	Known RBP	11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms