RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 BAXQ07812 192 aa14.33□□□□□ -0.12
TOP3A-219ENST00000584887 CLINT1Q14677 625 aa14.33□□□□□ -0.12
TOP3A-219ENST00000584887 GFI1BQ5VTD9 330 aa14.33□□□□□ -0.12
TOP3A-219ENST00000584887 CCDC28AQ8IWP9 274 aa14.33□□□□□ -0.12
TOP3A-219ENST00000584887 C12orf45Q8N5I9 185 aaPredicted RBP14.33□□□□□ -0.12
TOP3A-219ENST00000584887 OR1L4Q8NGR5 311 aa14.33□□□□□ -0.12
TOP3A-219ENST00000584887 RNASE8Q8TDE3 154 aaKnown RBP14.33□□□□□ -0.12
TOP3A-219ENST00000584887 C2orf50Q96LR7 162 aa14.33□□□□□ -0.12
TOP3A-219ENST00000584887 CCL18P55774 89 aa14.32□□□□□ -0.12
TOP3A-219ENST00000584887 RNF141Q8WVD5 230 aa14.32□□□□□ -0.12
TOP3A-219ENST00000584887 WDR83OSQ9Y284 106 aa14.32□□□□□ -0.12
TOP3A-219ENST00000584887 OR5I1Q13606 314 aa14.31□□□□□ -0.12
TOP3A-219ENST00000584887 ZNF575Q86XF7 245 aa14.31□□□□□ -0.12
TOP3A-219ENST00000584887 PFDN5Q99471 154 aa14.31□□□□□ -0.12
TOP3A-219ENST00000584887 C20orf144Q9BQM9 153 aa14.31□□□□□ -0.12
TOP3A-219ENST00000584887 SLC39A9Q9NUM3 307 aa14.31□□□□□ -0.12
TOP3A-219ENST00000584887 FAT2Q9NYQ8 4349 aa14.3□□□□□ -0.12
TOP3A-219ENST00000584887 H2AFB2P0C5Z0 115 aa14.3□□□□□ -0.12
TOP3A-219ENST00000584887 LEPP41159 167 aa14.3□□□□□ -0.12
TOP3A-219ENST00000584887 GUK1Q16774 197 aa14.3□□□□□ -0.12
TOP3A-219ENST00000584887 STX12Q86Y82 276 aa14.3□□□□□ -0.12
TOP3A-219ENST00000584887 C11orf1Q9H5F2 150 aa14.3□□□□□ -0.12
TOP3A-219ENST00000584887 MUC4Q99102 2169 aa14.3□□□□□ -0.12
TOP3A-219ENST00000584887 DNAH17Q9UFH2 4485 aa14.3□□□□□ -0.12
TOP3A-219ENST00000584887 TRAV12-3A0A0B4J271 114 aa14.29□□□□□ -0.12
TOP3A-219ENST00000584887 NBDYA0A0U1RRE5 68 aa14.29□□□□□ -0.12
TOP3A-219ENST00000584887 IGSF23A1L1A6 192 aa14.29□□□□□ -0.12
TOP3A-219ENST00000584887 GAGE12BA1L429 117 aa14.29□□□□□ -0.12
TOP3A-219ENST00000584887 GAGE7O76087 117 aa14.29□□□□□ -0.12
TOP3A-219ENST00000584887 GAGE12FP0CL80 117 aa14.29□□□□□ -0.12
TOP3A-219ENST00000584887 GAGE12GP0CL81 117 aa14.29□□□□□ -0.12
TOP3A-219ENST00000584887 GAGE12IP0CL82 117 aa14.29□□□□□ -0.12
TOP3A-219ENST00000584887 CT45A10P0DMU9 189 aa14.29□□□□□ -0.12
TOP3A-219ENST00000584887 FGF7P21781 194 aa14.29□□□□□ -0.12
TOP3A-219ENST00000584887 SULT1A1P50225 295 aa14.29□□□□□ -0.12
TOP3A-219ENST00000584887 ZNRF2Q8NHG8 242 aa14.29□□□□□ -0.12
TOP3A-219ENST00000584887 SAT2Q96F10 170 aaPredicted RBP14.29□□□□□ -0.12
TOP3A-219ENST00000584887 LYRM2Q9NU23 88 aaPredicted RBP14.29□□□□□ -0.12
TOP3A-219ENST00000584887 LINC00588Q9Y4M8 146 aa14.29□□□□□ -0.12
TOP3A-219ENST00000584887 SNURFLB1AK76 121 aa14.28□□□□□ -0.12
TOP3A-219ENST00000584887 RLN2P04090 185 aa14.28□□□□□ -0.12
TOP3A-219ENST00000584887 S100A11P31949 105 aa14.28□□□□□ -0.12
TOP3A-219ENST00000584887 HBG1P69891 147 aa14.28□□□□□ -0.12
TOP3A-219ENST00000584887 HBG2P69892 147 aa14.28□□□□□ -0.12
TOP3A-219ENST00000584887 RAB32Q13637 225 aa14.28□□□□□ -0.12
TOP3A-219ENST00000584887 GNPNAT1Q96EK6 184 aaPredicted RBP14.28□□□□□ -0.12
TOP3A-219ENST00000584887 GPN1Q9HCN4 374 aaPredicted RBP14.28□□□□□ -0.12
TOP3A-219ENST00000584887 ZNF586Q9NXT0 402 aa14.28□□□□□ -0.12
TOP3A-219ENST00000584887 DNAH2Q9P225 4427 aa14.28□□□□□ -0.12
TOP3A-219ENST00000584887 PKHD1P08F94 4074 aa14.27□□□□□ -0.12
TOP3A-219ENST00000584887 TRAV26-1A0A087WT03 109 aa14.27□□□□□ -0.13
TOP3A-219ENST00000584887 A0A0J9YY99 117 aa14.27□□□□□ -0.13
TOP3A-219ENST00000584887 FAM240BA0A1B0GVZ2 78 aa14.27□□□□□ -0.13
TOP3A-219ENST00000584887 RPL29P47914 159 aaKnown RBP14.27□□□□□ -0.13
TOP3A-219ENST00000584887 VWC2Q2TAL6 325 aa14.27□□□□□ -0.13
TOP3A-219ENST00000584887 SSX7Q7RTT5 188 aa14.27□□□□□ -0.13
TOP3A-219ENST00000584887 TMEM252Q8N6L7 170 aa14.27□□□□□ -0.13
TOP3A-219ENST00000584887 NPIPB6E9PJ23 425 aa14.26□□□□□ -0.13
TOP3A-219ENST00000584887 TNP2Q05952 138 aa14.26□□□□□ -0.13
TOP3A-219ENST00000584887 C6orf223Q8N319 242 aa14.26□□□□□ -0.13
TOP3A-219ENST00000584887 ODF3Q96PU9 254 aa14.26□□□□□ -0.13
TOP3A-219ENST00000584887 CCDC32Q9BV29 185 aa14.26□□□□□ -0.13
TOP3A-219ENST00000584887 NDUFA13Q9P0J0 144 aa14.26□□□□□ -0.13
TOP3A-219ENST00000584887 TIMM9Q9Y5J7 89 aa14.26□□□□□ -0.13
TOP3A-219ENST00000584887 M0R3E3 92 aa14.25□□□□□ -0.13
TOP3A-219ENST00000584887 M6PRP20645 277 aa14.25□□□□□ -0.13
TOP3A-219ENST00000584887 ERCC8Q13216 396 aa14.25□□□□□ -0.13
TOP3A-219ENST00000584887 BLNKQ8WV28 456 aa14.25□□□□□ -0.13
TOP3A-219ENST00000584887 TRBV19A0A075B6N1 114 aa14.24□□□□□ -0.13
TOP3A-219ENST00000584887 ZNF253O75346 499 aa14.24□□□□□ -0.13
TOP3A-219ENST00000584887 PYYP10082 97 aa14.24□□□□□ -0.13
TOP3A-219ENST00000584887 MZT2BQ6NZ67 158 aa14.24□□□□□ -0.13
TOP3A-219ENST00000584887 LINC00612Q8N6U2 182 aa14.24□□□□□ -0.13
TOP3A-219ENST00000584887 PYGO2Q9BRQ0 406 aa14.24□□□□□ -0.13
TOP3A-219ENST00000584887 HOXA5P20719 270 aa14.23□□□□□ -0.13
TOP3A-219ENST00000584887 GCSAMLQ5JQS6 135 aa14.23□□□□□ -0.13
TOP3A-219ENST00000584887 RXFP4Q8TDU9 374 aa14.23□□□□□ -0.13
TOP3A-219ENST00000584887 MRPL53Q96EL3 112 aaKnown RBP14.23□□□□□ -0.13
TOP3A-219ENST00000584887 TMPRSS5Q9H3S3 457 aa14.23□□□□□ -0.13
TOP3A-219ENST00000584887 PCLOQ9Y6V0 5065 aa14.22□□□□□ -0.13
TOP3A-219ENST00000584887 C7orf71A4D174 169 aa14.22□□□□□ -0.13
TOP3A-219ENST00000584887 HIST1H1EP10412 219 aaKnown RBP14.22□□□□□ -0.13
TOP3A-219ENST00000584887 IL15RAQ13261 267 aa14.22□□□□□ -0.13
TOP3A-219ENST00000584887 ATP6V1FQ16864 119 aa14.22□□□□□ -0.13
TOP3A-219ENST00000584887 Q6ZTI0 123 aa14.22□□□□□ -0.13
TOP3A-219ENST00000584887 THAP6Q8TBB0 222 aa14.22□□□□□ -0.13
TOP3A-219ENST00000584887 TMEM14CQ9P0S9 112 aa14.22□□□□□ -0.13
TOP3A-219ENST00000584887 C16orf90A8MZG2 172 aa14.21□□□□□ -0.13
TOP3A-219ENST00000584887 NDUFB4O95168 129 aa14.21□□□□□ -0.13
TOP3A-219ENST00000584887 SLC25A5P05141 298 aaKnown RBP14.21□□□□□ -0.13
TOP3A-219ENST00000584887 EXOC3-AS1Q8N2X6 119 aa14.21□□□□□ -0.13
TOP3A-219ENST00000584887 NPCDR1Q9BY65 106 aa14.21□□□□□ -0.13
TOP3A-219ENST00000584887 Q9H8V8 135 aa14.21□□□□□ -0.13
TOP3A-219ENST00000584887 GSN-AS1Q9NRJ2 163 aa14.21□□□□□ -0.13
TOP3A-219ENST00000584887 PRELID1Q9Y255 219 aa14.21□□□□□ -0.13
TOP3A-219ENST00000584887 DNAH11Q96DT5 4516 aa14.2□□□□□ -0.14
TOP3A-219ENST00000584887 TRGV2A0A075B6R0 118 aa14.2□□□□□ -0.14
TOP3A-219ENST00000584887 MPDU1O75352 247 aa14.2□□□□□ -0.14
TOP3A-219ENST00000584887 SIX6O95475 246 aa14.2□□□□□ -0.14
TOP3A-219ENST00000584887 RNASE4P34096 147 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 189 ms