RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, human

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-223	ENST00000584472	LYPD1	Q8N2G4	141 aa		11.83	□□□□□ -0.52
CSNK1D-223	ENST00000584472	EXOC3-AS1	Q8N2X6	119 aa		11.83	□□□□□ -0.52
CSNK1D-223	ENST00000584472	RNF182	Q8N6D2	247 aa		11.83	□□□□□ -0.52
CSNK1D-223	ENST00000584472	LINC00052	Q96N35	136 aa		11.83	□□□□□ -0.52
CSNK1D-223	ENST00000584472	CLEC5A	Q9NY25	188 aa		11.83	□□□□□ -0.52
CSNK1D-223	ENST00000584472	CCL20	P78556	96 aa		11.82	□□□□□ -0.52
CSNK1D-223	ENST00000584472	PSG3	Q16557	428 aa		11.82	□□□□□ -0.52
CSNK1D-223	ENST00000584472	LYPD6B	Q8NI32	183 aa		11.82	□□□□□ -0.52
CSNK1D-223	ENST00000584472	TM2D3	Q9BRN9	247 aa		11.82	□□□□□ -0.52
CSNK1D-223	ENST00000584472		Q9H3A6	140 aa		11.82	□□□□□ -0.52
CSNK1D-223	ENST00000584472	AAMDC	Q9H7C9	122 aa		11.82	□□□□□ -0.52
CSNK1D-223	ENST00000584472	RBMY1B	A6NDE4	496 aa	Known RBP	11.81	□□□□□ -0.52
CSNK1D-223	ENST00000584472	RBMY1E	A6NEQ0	496 aa	Known RBP	11.81	□□□□□ -0.52
CSNK1D-223	ENST00000584472	C3orf84	H3BNL1	204 aa		11.81	□□□□□ -0.52
CSNK1D-223	ENST00000584472	RBMY1D	P0C7P1	496 aa	Known RBP	11.81	□□□□□ -0.52
CSNK1D-223	ENST00000584472	ICAM4	Q14773	271 aa		11.81	□□□□□ -0.52
CSNK1D-223	ENST00000584472	HAGH	Q16775	308 aa		11.81	□□□□□ -0.52
CSNK1D-223	ENST00000584472	ZNF767P	Q75MW2	155 aa		11.81	□□□□□ -0.52
CSNK1D-223	ENST00000584472	APRG1	Q8IVJ8	170 aa		11.81	□□□□□ -0.52
CSNK1D-223	ENST00000584472	PRELID1	Q9Y255	219 aa		11.81	□□□□□ -0.52
CSNK1D-223	ENST00000584472		A0A1W2PRE2	83 aa		11.8	□□□□□ -0.52
CSNK1D-223	ENST00000584472		M0R3E3	92 aa		11.8	□□□□□ -0.52
CSNK1D-223	ENST00000584472	PPT1	P50897	306 aa		11.8	□□□□□ -0.52
CSNK1D-223	ENST00000584472	UBE2G2	P60604	165 aa		11.8	□□□□□ -0.52
CSNK1D-223	ENST00000584472	ZNF124	Q15973	351 aa		11.8	□□□□□ -0.52
CSNK1D-223	ENST00000584472	PCNP	Q8WW12	178 aa	Known RBP	11.8	□□□□□ -0.52
CSNK1D-223	ENST00000584472	MRPL53	Q96EL3	112 aa	Known RBP	11.8	□□□□□ -0.52
CSNK1D-223	ENST00000584472	ZMAT4	Q9H898	229 aa		11.8	□□□□□ -0.52
CSNK1D-223	ENST00000584472	OTOR	Q9NRC9	128 aa		11.8	□□□□□ -0.52
CSNK1D-223	ENST00000584472	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.8	□□□□□ -0.52
CSNK1D-223	ENST00000584472	ARL2-SNX15	V9GYD0	113 aa		11.8	□□□□□ -0.52
CSNK1D-223	ENST00000584472	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.79	□□□□□ -0.52
CSNK1D-223	ENST00000584472	PGP	A6NDG6	321 aa		11.79	□□□□□ -0.52
CSNK1D-223	ENST00000584472	FAM74A7	A6NL05	159 aa		11.79	□□□□□ -0.52
CSNK1D-223	ENST00000584472	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.79	□□□□□ -0.52
CSNK1D-223	ENST00000584472	NMB	P08949	121 aa		11.79	□□□□□ -0.52
CSNK1D-223	ENST00000584472	DEFB1	P60022	68 aa		11.79	□□□□□ -0.52
CSNK1D-223	ENST00000584472	PMS2P11	Q13670	270 aa		11.79	□□□□□ -0.52
CSNK1D-223	ENST00000584472	ZNF738	Q8NE65	137 aa		11.79	□□□□□ -0.52
CSNK1D-223	ENST00000584472	CITED4	Q96RK1	184 aa		11.79	□□□□□ -0.52
CSNK1D-223	ENST00000584472	SPATA25	Q9BR10	227 aa		11.79	□□□□□ -0.52
CSNK1D-223	ENST00000584472	AGRN	O00468	2067 aa		11.79	□□□□□ -0.52
CSNK1D-223	ENST00000584472	GGTLC3	B5MD39	225 aa		11.78	□□□□□ -0.52
CSNK1D-223	ENST00000584472	PAGE4	O60829	102 aa		11.78	□□□□□ -0.52
CSNK1D-223	ENST00000584472	GDF5OS	Q5U4N7	250 aa		11.78	□□□□□ -0.52
CSNK1D-223	ENST00000584472	RPUSD4	Q96CM3	377 aa	Known RBP	11.78	□□□□□ -0.52
CSNK1D-223	ENST00000584472	SAV1	Q9H4B6	383 aa	Predicted RBP	11.78	□□□□□ -0.52
CSNK1D-223	ENST00000584472	MANBAL	Q9NQG1	85 aa		11.78	□□□□□ -0.52
CSNK1D-223	ENST00000584472	GNG13	Q9P2W3	67 aa		11.78	□□□□□ -0.52
CSNK1D-223	ENST00000584472	PRAC2	D3DTV9	90 aa		11.77	□□□□□ -0.53
CSNK1D-223	ENST00000584472		F6UB75	175 aa		11.77	□□□□□ -0.53
CSNK1D-223	ENST00000584472	PRB4	P10163	310 aa	Predicted RBP	11.77	□□□□□ -0.53
CSNK1D-223	ENST00000584472	SUMO1	P63165	101 aa	Known RBP	11.77	□□□□□ -0.53
CSNK1D-223	ENST00000584472	FOXI2	Q6ZQN5	318 aa		11.77	□□□□□ -0.53
CSNK1D-223	ENST00000584472	RXFP4	Q8TDU9	374 aa		11.77	□□□□□ -0.53
CSNK1D-223	ENST00000584472	RCHY1	Q96PM5	261 aa		11.77	□□□□□ -0.53
CSNK1D-223	ENST00000584472	NKX6-2	Q9C056	277 aa	Predicted RBP	11.77	□□□□□ -0.53
CSNK1D-223	ENST00000584472	KIR2DL5B	A0A0G2JN68	375 aa		11.76	□□□□□ -0.53
CSNK1D-223	ENST00000584472	KIR2DL5B	A0A0G2JPC4	375 aa		11.76	□□□□□ -0.53
CSNK1D-223	ENST00000584472		A0A0J9YX75	114 aa		11.76	□□□□□ -0.53
CSNK1D-223	ENST00000584472	KNCN	A6PVL3	124 aa		11.76	□□□□□ -0.53
CSNK1D-223	ENST00000584472	APOC4	P55056	127 aa		11.76	□□□□□ -0.53
CSNK1D-223	ENST00000584472	RAB14	P61106	215 aa		11.76	□□□□□ -0.53
CSNK1D-223	ENST00000584472	ACTL10	Q5JWF8	245 aa		11.76	□□□□□ -0.53
CSNK1D-223	ENST00000584472	CST9LP1	Q5W188	147 aa		11.76	□□□□□ -0.53
CSNK1D-223	ENST00000584472	CCDC28A	Q8IWP9	274 aa		11.76	□□□□□ -0.53
CSNK1D-223	ENST00000584472	KIR2DL5A	Q8N109	375 aa		11.76	□□□□□ -0.53
CSNK1D-223	ENST00000584472	ARL6IP6	Q8N6S5	226 aa		11.76	□□□□□ -0.53
CSNK1D-223	ENST00000584472	KIR2DL5B	Q8NHK3	375 aa		11.76	□□□□□ -0.53
CSNK1D-223	ENST00000584472	CMTM2	Q8TAZ6	248 aa		11.76	□□□□□ -0.53
CSNK1D-223	ENST00000584472	IFNA1	P01562	189 aa		11.75	□□□□□ -0.53
CSNK1D-223	ENST00000584472	SLC25A5	P05141	298 aa	Known RBP	11.75	□□□□□ -0.53
CSNK1D-223	ENST00000584472	HLA-DRB4	P13762	266 aa		11.75	□□□□□ -0.53
CSNK1D-223	ENST00000584472	CSN1S1	P47710	185 aa		11.75	□□□□□ -0.53
CSNK1D-223	ENST00000584472	ATP5G3	P48201	142 aa		11.75	□□□□□ -0.53
CSNK1D-223	ENST00000584472	CLLU1	Q5K131	121 aa		11.75	□□□□□ -0.53
CSNK1D-223	ENST00000584472	EBLN2	Q6P2I7	272 aa		11.75	□□□□□ -0.53
CSNK1D-223	ENST00000584472	C5orf17	Q8NAS9	161 aa		11.75	□□□□□ -0.53
CSNK1D-223	ENST00000584472	OR8A1	Q8NGG7	326 aa		11.75	□□□□□ -0.53
CSNK1D-223	ENST00000584472	HLA-DRB4	X5D2U9	266 aa		11.75	□□□□□ -0.53
CSNK1D-223	ENST00000584472	DIRC3	C9JPN6	131 aa		11.74	□□□□□ -0.53
CSNK1D-223	ENST00000584472		H3BMM0	161 aa		11.74	□□□□□ -0.53
CSNK1D-223	ENST00000584472	UBE2C	O00762	179 aa		11.74	□□□□□ -0.53
CSNK1D-223	ENST00000584472	RGS13	O14921	159 aa		11.74	□□□□□ -0.53
CSNK1D-223	ENST00000584472	ZNF705D	P0CH99	300 aa	Predicted RBP	11.74	□□□□□ -0.53
CSNK1D-223	ENST00000584472	ZNF705B	P0CI00	300 aa	Predicted RBP	11.74	□□□□□ -0.53
CSNK1D-223	ENST00000584472	BCL2	P10415	239 aa		11.74	□□□□□ -0.53
CSNK1D-223	ENST00000584472	GNG5	P63218	68 aa		11.74	□□□□□ -0.53
CSNK1D-223	ENST00000584472	STH	Q8IWL8	128 aa		11.74	□□□□□ -0.53
CSNK1D-223	ENST00000584472	EPDR1	Q9UM22	224 aa		11.74	□□□□□ -0.53
CSNK1D-223	ENST00000584472	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.74	□□□□□ -0.53
CSNK1D-223	ENST00000584472	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.73	□□□□□ -0.53
CSNK1D-223	ENST00000584472	C11orf94	C9JXX5	98 aa		11.73	□□□□□ -0.53
CSNK1D-223	ENST00000584472	IGKV2D-40	P01614	121 aa	Predicted RBP	11.73	□□□□□ -0.53
CSNK1D-223	ENST00000584472	TAGLN2	P37802	199 aa	Known RBP	11.73	□□□□□ -0.53
CSNK1D-223	ENST00000584472	CNN1	P51911	297 aa	Known RBP	11.73	□□□□□ -0.53
CSNK1D-223	ENST00000584472	HIST1H1A	Q02539	215 aa	Predicted RBP	11.73	□□□□□ -0.53
CSNK1D-223	ENST00000584472	TRPT1	Q86TN4	253 aa	Known RBP	11.73	□□□□□ -0.53
CSNK1D-223	ENST00000584472	MUC7	Q8TAX7	377 aa		11.73	□□□□□ -0.53
CSNK1D-223	ENST00000584472	RPH3AL	Q9UNE2	315 aa		11.73	□□□□□ -0.53

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