RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 CCL13Q99616 98 aa1.47□□□□□ -2.17
VAPA-206ENST00000583475 FAAP24Q9BTP7 215 aa1.47□□□□□ -2.17
VAPA-206ENST00000583475 RTL8AQ9BWD3 113 aa1.47□□□□□ -2.17
VAPA-206ENST00000583475 REG4Q9BYZ8 158 aa1.47□□□□□ -2.17
VAPA-206ENST00000583475 ABCG5Q9H222 651 aa1.47□□□□□ -2.17
VAPA-206ENST00000583475 MAP1LC3AQ9H492 121 aa1.47□□□□□ -2.17
VAPA-206ENST00000583475 BANF2Q9H503 90 aa1.47□□□□□ -2.17
VAPA-206ENST00000583475 ZNF286AQ9HBT8 521 aa1.47□□□□□ -2.17
VAPA-206ENST00000583475 TMEM138Q9NPI0 162 aa1.47□□□□□ -2.17
VAPA-206ENST00000583475 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.47□□□□□ -2.17
VAPA-206ENST00000583475 TMEM100Q9NV29 134 aa1.47□□□□□ -2.17
VAPA-206ENST00000583475 MTFP1Q9UDX5 166 aa1.47□□□□□ -2.17
VAPA-206ENST00000583475 RPUSD1Q9UJJ7 312 aaKnown RBP1.47□□□□□ -2.17
VAPA-206ENST00000583475 ERGIC3Q9Y282 383 aa1.47□□□□□ -2.17
VAPA-206ENST00000583475 TPRKBQ9Y3C4 175 aa1.47□□□□□ -2.17
VAPA-206ENST00000583475 ORC6Q9Y5N6 252 aa1.47□□□□□ -2.17
VAPA-206ENST00000583475 INSIG2Q9Y5U4 225 aa1.47□□□□□ -2.17
VAPA-206ENST00000583475 PLECQ15149 4684 aaKnown RBP1.46□□□□□ -2.17
VAPA-206ENST00000583475 DNAH1Q9P2D7 4330 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 RYR3Q15413 4870 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 SACSQ9NZJ4 4579 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 TRAV8-6A0A0B4J262 113 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 IGHV3OR16-9A0A0B4J2B5 98 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 IGHV7-4-1A0A0J9YVY3 117 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 ODAMA1E959 279 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 TMEM235A6NFC5 223 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 GGT3PA6NGU5 568 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 CLDN25C9JDP6 229 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 TAAR5O14804 337 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 NDUFS5O43920 106 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 HAND1O96004 215 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 CYB5AP00167 134 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 IGKV1-39P01597 117 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 APOC1P02654 83 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 MT-ND4P03905 459 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 IGKV1D-39P04432 117 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 MSMBP08118 114 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 HIST1H1EP10412 219 aaKnown RBP1.46□□□□□ -2.18
VAPA-206ENST00000583475 HIST1H1DP16402 221 aaKnown RBP1.46□□□□□ -2.18
VAPA-206ENST00000583475 AKR1C4P17516 323 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 CDK2P24941 298 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 ERP29P30040 261 aaKnown RBP1.46□□□□□ -2.18
VAPA-206ENST00000583475 RPL12P30050 165 aaKnown RBP1.46□□□□□ -2.18
VAPA-206ENST00000583475 ZNF93P35789 620 aaPredicted RBP1.46□□□□□ -2.18
VAPA-206ENST00000583475 TALDO1P37837 337 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 SRP9P49458 86 aaKnown RBP1.46□□□□□ -2.18
VAPA-206ENST00000583475 SULT1A1P50225 295 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 SULT1A2P50226 295 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 TMBIM6P55061 237 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 TMEM33P57088 247 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 RAB25P57735 213 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 LSM3P62310 102 aaKnown RBP1.46□□□□□ -2.18
VAPA-206ENST00000583475 RPL19P84098 196 aaKnown RBP1.46□□□□□ -2.18
VAPA-206ENST00000583475 BAXQ07812 192 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 SMAGPQ0VAQ4 97 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 SLC9A3R2Q15599 337 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 HSD17B12Q53GQ0 312 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 AADACL3Q5VUY0 350 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 TRIQKQ629K1 86 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 LAMTOR1Q6IAA8 161 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 GLIPR1L1Q6UWM5 242 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 FAM231DQ6ZW35 169 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 COMMD7Q86VX2 200 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 LHFPL1Q86WI0 220 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 NIT1Q86X76 327 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 SNX29P2Q8IUI4 249 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 ZNF664Q8N3J9 261 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 C11orf72Q8NBR9 251 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 ZNF680Q8NEM1 530 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 OR11H6Q8NGC7 330 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 OR4M1Q8NGD0 313 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 OR13C8Q8NGS7 320 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 OR1L1Q8NH94 360 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 NEK7Q8TDX7 302 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 TNFAIP8L1Q8WVP5 186 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 MAFIPQ8WZ33 124 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 CCL17Q92583 94 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 BORCS8Q96FH0 119 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 ARHGAP5-AS1Q96IT6 56 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 BTF3L4Q96K17 158 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 PRRT1Q99946 306 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 SHANK2-AS3Q9BTD1 123 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 GGTLC1Q9BX51 225 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 PECRQ9BY49 303 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 CHST6Q9GZX3 395 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 SLC22A4Q9H015 551 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 FXYD6Q9H0Q3 95 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 DCSTAMPQ9H295 470 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 MS4A6AQ9H2W1 248 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 DYNLRB1Q9NP97 96 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 FAIMQ9NVQ4 179 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 SCN3BQ9NY72 215 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 RASL12Q9NYN1 266 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 AK3Q9UIJ7 227 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 VAX2Q9UIW0 290 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 TP53TG1Q9Y2A0 90 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 ZNF257Q9Y2Q1 563 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 LSM5Q9Y4Y9 91 aaKnown RBP1.46□□□□□ -2.18
VAPA-206ENST00000583475 ALG5Q9Y673 324 aa1.46□□□□□ -2.18
VAPA-206ENST00000583475 NBEAL2Q6ZNJ1 2754 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms