RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 OR4B1Q8NGF8 309 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 OR9Q1Q8NGQ5 310 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 OR10AG1Q8NH19 301 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 ZNF418Q8TF45 676 aaPredicted RBP0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 DYDC1Q8WWB3 177 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 PATE1Q8WXA2 126 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 HYLS1Q96M11 299 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 ZNF714Q96N38 554 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 ODF3Q96PU9 254 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 GPX7Q96SL4 187 aaPredicted RBP0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 HOPXQ9BPY8 73 aaPredicted RBP0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 CACYBPQ9HB71 228 aaKnown RBP0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 MED29Q9NX70 200 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 MED11Q9P086 117 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 HSPB11Q9Y547 144 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 TCOF1Q13428 1488 aaKnown RBP0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 FRMPD1Q5SYB0 1578 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 MAP2P11137 1827 aaKnown RBP0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 KIF13AQ9H1H9 1805 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 TCHHQ07283 1943 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 CITO14578 2027 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 E9PCH4 1651 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 CECR2Q9BXF3 1484 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 TRBV6-7A0A0A0MS04 114 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 TRBV6-8A0A0A6YYG3 113 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 TRAV10A0A0B4J240 114 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 TRBV7-6A0A0J9YX20 115 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 TRBV6-4A0A1B0GX49 114 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 TRDV1A0A1B0GX56 115 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 GNG14A0A1W2PPG7 69 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 hDV103S1A0JD37 113 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 CCDC160A6NGH7 325 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 OR2T8A6NH00 312 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 KPNA4O00629 521 aaPredicted RBP0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 CCL16O15467 120 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 NUPR1O60356 82 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 G0S2P27469 103 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 S100GP29377 79 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 TMBIM6P55061 237 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 DEFA3P59666 94 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 CNBPP62633 177 aaKnown RBP0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 EIF3IQ13347 325 aaKnown RBP0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 CIRBPQ14011 172 aaKnown RBP0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 SAMD13Q5VXD3 122 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 HAGHLQ6PII5 290 aaPredicted RBP0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 TEX261Q6UWH6 196 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 PATE2Q6UY27 113 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 LINC00299Q6ZSB3 139 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 ZNF833PQ6ZTB9 187 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 ARPINQ7Z6K5 226 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 EXOC3-AS1Q8N2X6 119 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 LRRC18Q8N456 261 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 PLPP5Q8NEB5 264 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 OR4K15Q8NH41 348 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 STAG3L4Q8TBR4 150 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 THEM6Q8WUY1 208 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 PYDC1Q8WXC3 89 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 CHCHD1Q96BP2 118 aaKnown RBP0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 BORCS8Q96FH0 119 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 LINC00052Q96N35 136 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 LXNQ9BS40 222 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 SS18L2Q9UHA2 77 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 CHCHD2Q9Y6H1 151 aaPredicted RBP0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 U3KQ87 197 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 MYH8P13535 1937 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 CEP152O94986 1710 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 BCORL1Q5H9F3 1711 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 DLC1Q96QB1 1528 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 BCL9O00512 1426 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 NAV3Q8IVL0 2385 aa0.38□□□□□ -2.35
SMCHD1-206ENST00000581631 PLXNA1Q9UIW2 1896 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 ESPL1Q14674 2120 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 A2MP01023 1474 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 ARAP1Q96P48 1450 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 RFX7Q2KHR2 1363 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 BORCS7-ASMTA0A0B4J1R7 106 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 TRAV3A0A0B4J244 114 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 IGHV1-58A0A0C4DH39 117 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 A0A1W2PRE2 83 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 PRORSD1PA6NEY8 169 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 F8W1H4 67 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 H0YJX3 145 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 H3BRM9 83 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 RER1O15258 196 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 CXCL1P09341 107 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 SAA1P0DJI8 122 aaPredicted RBP0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 FABP4P15090 132 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 SDC2P34741 201 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 GLRXP35754 106 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 ZNF93P35789 620 aaPredicted RBP0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 INSL3P51460 131 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 GTF2A1P52655 376 aaPredicted RBP0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 ARPP19P56211 112 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 RPS28P62857 69 aaKnown RBP0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 MSMO1Q15800 293 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 LTC4SQ16873 150 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 DEFB113Q30KQ7 82 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 CCSMST1Q4G0I0 132 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 TMEM128Q5BJH2 165 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 KRTAP26-1Q6PEX3 210 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms