RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 FBN2P35556 2912 aa0.59□□□□□ -2.31
TTC39C-207ENST00000581394 PLXNA4Q9HCM2 1894 aa0.59□□□□□ -2.31
TTC39C-207ENST00000581394 OR2T8A6NH00 312 aa0.59□□□□□ -2.31
TTC39C-207ENST00000581394 IFNA4P05014 189 aa0.59□□□□□ -2.31
TTC39C-207ENST00000581394 Q5XG85 94 aa0.59□□□□□ -2.31
TTC39C-207ENST00000581394 C2orf82Q6UX34 121 aa0.59□□□□□ -2.31
TTC39C-207ENST00000581394 FOXI2Q6ZQN5 318 aa0.59□□□□□ -2.31
TTC39C-207ENST00000581394 ISOC1Q96CN7 298 aa0.59□□□□□ -2.31
TTC39C-207ENST00000581394 CCDC32Q9BV29 185 aa0.59□□□□□ -2.31
TTC39C-207ENST00000581394 MRPL40Q9NQ50 206 aaKnown RBP0.59□□□□□ -2.31
TTC39C-207ENST00000581394 ARAP1Q96P48 1450 aa0.59□□□□□ -2.32
TTC39C-207ENST00000581394 MGAMO43451 1857 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 MYO5AQ9Y4I1 1855 aaKnown RBP0.58□□□□□ -2.32
TTC39C-207ENST00000581394 N4BP2Q86UW6 1770 aaPredicted RBP0.58□□□□□ -2.32
TTC39C-207ENST00000581394 UBR2Q8IWV8 1755 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 KDM6AO15550 1401 aaPredicted RBP0.58□□□□□ -2.32
TTC39C-207ENST00000581394 FAM135BQ49AJ0 1406 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 KIAA1107Q9UPP5 1409 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 TNRC6AQ8NDV7 1962 aaKnown RBP0.58□□□□□ -2.32
TTC39C-207ENST00000581394 TRBV7-6A0A0J9YX20 115 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 TRBV27A0A0K0K1C4 114 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 LOC107984640A0A0U1RRK4 108 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 GNG14A0A1W2PPG7 69 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 IL9P15248 144 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 COX7CP15954 63 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 FOXA3P55318 350 aaPredicted RBP0.58□□□□□ -2.32
TTC39C-207ENST00000581394 PSG9Q00887 426 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 MIR22HGQ0VDD5 57 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 FAM74A1Q5RGS3 127 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 LINC00322Q6ZN03 302 aaPredicted RBP0.58□□□□□ -2.32
TTC39C-207ENST00000581394 SMIM15Q7Z3B0 74 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 LRRC18Q8N456 261 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 GRPEL2Q8TAA5 225 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 BORCS5Q969J3 196 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 CBLN4Q9NTU7 201 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 TRAPPC2LQ9UL33 140 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 NUP210LQ5VU65 1888 aa0.58□□□□□ -2.32
TTC39C-207ENST00000581394 MYH10P35580 1976 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 TCOF1Q13428 1488 aaKnown RBP0.57□□□□□ -2.32
TTC39C-207ENST00000581394 E7EQ34 232 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 F8W1H4 67 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 IGHV3-33P01772 117 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 MT-ND6P03923 174 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 FABP2P12104 132 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 SDC2P34741 201 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 DR1Q01658 176 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 GLIPR1L1Q6UWM5 242 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 LINC00305Q7Z4B0 112 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 SBSPONQ8IVN8 264 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 IFT20Q8IY31 132 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 TEX29Q8N6K0 151 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.57□□□□□ -2.32
TTC39C-207ENST00000581394 TET1Q8NFU7 2136 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 OR9Q1Q8NGQ5 310 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 OR10AG1Q8NH19 301 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 NAT14Q8WUY8 206 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 NABP2Q9BQ15 211 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 GINS2Q9Y248 185 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 LAMTOR2Q9Y2Q5 125 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 ANKRD30AQ9BXX3 1397 aa0.57□□□□□ -2.32
TTC39C-207ENST00000581394 PHRF1Q9P1Y6 1649 aaKnown RBP0.56□□□□□ -2.32
TTC39C-207ENST00000581394 LYRM1O43325 122 aa0.56□□□□□ -2.32
TTC39C-207ENST00000581394 DNAL4O96015 105 aa0.56□□□□□ -2.32
TTC39C-207ENST00000581394 IGLV3-1P01715 115 aa0.56□□□□□ -2.32
TTC39C-207ENST00000581394 FABP4P15090 132 aa0.56□□□□□ -2.32
TTC39C-207ENST00000581394 EFNA4P52798 201 aa0.56□□□□□ -2.32
TTC39C-207ENST00000581394 RPS28P62857 69 aaKnown RBP0.56□□□□□ -2.32
TTC39C-207ENST00000581394 MRPS36P82909 103 aaKnown RBP0.56□□□□□ -2.32
TTC39C-207ENST00000581394 PRB3Q04118 309 aaPredicted RBP0.56□□□□□ -2.32
TTC39C-207ENST00000581394 SAMD13Q5VXD3 122 aa0.56□□□□□ -2.32
TTC39C-207ENST00000581394 Q8N6K4 173 aa0.56□□□□□ -2.32
TTC39C-207ENST00000581394 MORN4Q8NDC4 146 aa0.56□□□□□ -2.32
TTC39C-207ENST00000581394 PRELID3AQ96N28 172 aa0.56□□□□□ -2.32
TTC39C-207ENST00000581394 MRPL57Q9BQC6 102 aaKnown RBP0.56□□□□□ -2.32
TTC39C-207ENST00000581394 LIMD2Q9BT23 127 aa0.56□□□□□ -2.32
TTC39C-207ENST00000581394 TCEAL2Q9H3H9 227 aaPredicted RBP0.56□□□□□ -2.32
TTC39C-207ENST00000581394 FKBP11Q9NYL4 201 aa0.56□□□□□ -2.32
TTC39C-207ENST00000581394 TMEM14CQ9P0S9 112 aa0.56□□□□□ -2.32
TTC39C-207ENST00000581394 ZNF469Q96JG9 3925 aaPredicted RBP0.56□□□□□ -2.32
TTC39C-207ENST00000581394 HEATR1Q9H583 2144 aaKnown RBP0.56□□□□□ -2.32
TTC39C-207ENST00000581394 E9PCH4 1651 aa0.56□□□□□ -2.32
TTC39C-207ENST00000581394 PIK3C2AO00443 1686 aa0.56□□□□□ -2.32
TTC39C-207ENST00000581394 NOTCH1P46531 2555 aa0.55□□□□□ -2.32
TTC39C-207ENST00000581394 TRAV13-1A0A0B4J241 112 aa0.55□□□□□ -2.32
TTC39C-207ENST00000581394 H3BMG7 143 aa0.55□□□□□ -2.32
TTC39C-207ENST00000581394 CCL4P13236 92 aa0.55□□□□□ -2.32
TTC39C-207ENST00000581394 DIAPH2-AS1Q14236 149 aa0.55□□□□□ -2.32
TTC39C-207ENST00000581394 HAGHLQ6PII5 290 aaPredicted RBP0.55□□□□□ -2.32
TTC39C-207ENST00000581394 OR5H6Q8NGV6 325 aa0.55□□□□□ -2.32
TTC39C-207ENST00000581394 CLEC2BQ92478 149 aa0.55□□□□□ -2.32
TTC39C-207ENST00000581394 MCEEQ96PE7 176 aa0.55□□□□□ -2.32
TTC39C-207ENST00000581394 OR4C12Q96R67 309 aa0.55□□□□□ -2.32
TTC39C-207ENST00000581394 AMELYQ99218 206 aa0.55□□□□□ -2.32
TTC39C-207ENST00000581394 ALPK3Q96L96 1907 aa0.55□□□□□ -2.32
TTC39C-207ENST00000581394 ERBINQ96RT1 1412 aa0.55□□□□□ -2.32
TTC39C-207ENST00000581394 H3BRM9 83 aa0.54□□□□□ -2.32
TTC39C-207ENST00000581394 FAM107AO95990 144 aa0.54□□□□□ -2.32
TTC39C-207ENST00000581394 PPYP01298 95 aa0.54□□□□□ -2.32
TTC39C-207ENST00000581394 S100GP29377 79 aa0.54□□□□□ -2.32
TTC39C-207ENST00000581394 RPL22P35268 128 aaKnown RBP0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms