RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 DEFB1P60022 68 aa11.79□□□□□ -0.52
CSNK1D-212ENST00000580061 PMS2P11Q13670 270 aa11.79□□□□□ -0.52
CSNK1D-212ENST00000580061 DEFB125Q8N687 156 aa11.79□□□□□ -0.52
CSNK1D-212ENST00000580061 ZNF738Q8NE65 137 aa11.79□□□□□ -0.52
CSNK1D-212ENST00000580061 AGRNO00468 2067 aa11.79□□□□□ -0.52
CSNK1D-212ENST00000580061 GGTLC3B5MD39 225 aa11.78□□□□□ -0.52
CSNK1D-212ENST00000580061 PAGE4O60829 102 aa11.78□□□□□ -0.52
CSNK1D-212ENST00000580061 PRB2P02812 416 aaPredicted RBP11.78□□□□□ -0.52
CSNK1D-212ENST00000580061 GDF5OSQ5U4N7 250 aa11.78□□□□□ -0.52
CSNK1D-212ENST00000580061 RPUSD4Q96CM3 377 aaKnown RBP11.78□□□□□ -0.52
CSNK1D-212ENST00000580061 CITED4Q96RK1 184 aa11.78□□□□□ -0.52
CSNK1D-212ENST00000580061 SAV1Q9H4B6 383 aaPredicted RBP11.78□□□□□ -0.52
CSNK1D-212ENST00000580061 MANBALQ9NQG1 85 aa11.78□□□□□ -0.52
CSNK1D-212ENST00000580061 GNG13Q9P2W3 67 aa11.78□□□□□ -0.52
CSNK1D-212ENST00000580061 PRAC2D3DTV9 90 aa11.77□□□□□ -0.53
CSNK1D-212ENST00000580061 F6UB75 175 aa11.77□□□□□ -0.53
CSNK1D-212ENST00000580061 PRB4P10163 310 aaPredicted RBP11.77□□□□□ -0.53
CSNK1D-212ENST00000580061 SUMO1P63165 101 aaKnown RBP11.77□□□□□ -0.53
CSNK1D-212ENST00000580061 FOXI2Q6ZQN5 318 aa11.77□□□□□ -0.53
CSNK1D-212ENST00000580061 RXFP4Q8TDU9 374 aa11.77□□□□□ -0.53
CSNK1D-212ENST00000580061 NKX6-2Q9C056 277 aaPredicted RBP11.77□□□□□ -0.53
CSNK1D-212ENST00000580061 A0A0J9YX75 114 aa11.76□□□□□ -0.53
CSNK1D-212ENST00000580061 KNCNA6PVL3 124 aa11.76□□□□□ -0.53
CSNK1D-212ENST00000580061 RAB14P61106 215 aa11.76□□□□□ -0.53
CSNK1D-212ENST00000580061 ACTL10Q5JWF8 245 aa11.76□□□□□ -0.53
CSNK1D-212ENST00000580061 CST9LP1Q5W188 147 aa11.76□□□□□ -0.53
CSNK1D-212ENST00000580061 CCDC28AQ8IWP9 274 aa11.76□□□□□ -0.53
CSNK1D-212ENST00000580061 ARL6IP6Q8N6S5 226 aa11.76□□□□□ -0.53
CSNK1D-212ENST00000580061 CMTM2Q8TAZ6 248 aa11.76□□□□□ -0.53
CSNK1D-212ENST00000580061 K7EIL1 84 aa11.75□□□□□ -0.53
CSNK1D-212ENST00000580061 IFNA1P01562 189 aa11.75□□□□□ -0.53
CSNK1D-212ENST00000580061 SLC25A5P05141 298 aaKnown RBP11.75□□□□□ -0.53
CSNK1D-212ENST00000580061 HLA-DRB4P13762 266 aa11.75□□□□□ -0.53
CSNK1D-212ENST00000580061 CSN1S1P47710 185 aa11.75□□□□□ -0.53
CSNK1D-212ENST00000580061 ATP5G3P48201 142 aa11.75□□□□□ -0.53
CSNK1D-212ENST00000580061 CLLU1Q5K131 121 aa11.75□□□□□ -0.53
CSNK1D-212ENST00000580061 EBLN2Q6P2I7 272 aa11.75□□□□□ -0.53
CSNK1D-212ENST00000580061 C5orf17Q8NAS9 161 aa11.75□□□□□ -0.53
CSNK1D-212ENST00000580061 OR8A1Q8NGG7 326 aa11.75□□□□□ -0.53
CSNK1D-212ENST00000580061 SRD5A3Q9H8P0 318 aa11.75□□□□□ -0.53
CSNK1D-212ENST00000580061 HLA-DRB4X5D2U9 266 aa11.75□□□□□ -0.53
CSNK1D-212ENST00000580061 A8MZ25 164 aa11.74□□□□□ -0.53
CSNK1D-212ENST00000580061 DIRC3C9JPN6 131 aa11.74□□□□□ -0.53
CSNK1D-212ENST00000580061 H3BMM0 161 aa11.74□□□□□ -0.53
CSNK1D-212ENST00000580061 RGS13O14921 159 aa11.74□□□□□ -0.53
CSNK1D-212ENST00000580061 ZNF705DP0CH99 300 aaPredicted RBP11.74□□□□□ -0.53
CSNK1D-212ENST00000580061 ZNF705BP0CI00 300 aaPredicted RBP11.74□□□□□ -0.53
CSNK1D-212ENST00000580061 IGHV4-30-4P0DP06 118 aa11.74□□□□□ -0.53
CSNK1D-212ENST00000580061 BCL2P10415 239 aa11.74□□□□□ -0.53
CSNK1D-212ENST00000580061 GNG5P63218 68 aa11.74□□□□□ -0.53
CSNK1D-212ENST00000580061 HAGHQ16775 308 aa11.74□□□□□ -0.53
CSNK1D-212ENST00000580061 STHQ8IWL8 128 aa11.74□□□□□ -0.53
CSNK1D-212ENST00000580061 EPDR1Q9UM22 224 aa11.74□□□□□ -0.53
CSNK1D-212ENST00000580061 IGKV2-40A0A087WW87 121 aaPredicted RBP11.73□□□□□ -0.53
CSNK1D-212ENST00000580061 C11orf94C9JXX5 98 aa11.73□□□□□ -0.53
CSNK1D-212ENST00000580061 IGKV2D-40P01614 121 aaPredicted RBP11.73□□□□□ -0.53
CSNK1D-212ENST00000580061 TAGLN2P37802 199 aaKnown RBP11.73□□□□□ -0.53
CSNK1D-212ENST00000580061 CNN1P51911 297 aaKnown RBP11.73□□□□□ -0.53
CSNK1D-212ENST00000580061 HIST1H1AQ02539 215 aaPredicted RBP11.73□□□□□ -0.53
CSNK1D-212ENST00000580061 TRPT1Q86TN4 253 aaKnown RBP11.73□□□□□ -0.53
CSNK1D-212ENST00000580061 RPH3ALQ9UNE2 315 aa11.73□□□□□ -0.53
CSNK1D-212ENST00000580061 LOC102723971A0A1B0GUV8 181 aa11.72□□□□□ -0.53
CSNK1D-212ENST00000580061 RBAKDNA6NC62 111 aa11.72□□□□□ -0.53
CSNK1D-212ENST00000580061 A8MTW9 85 aa11.72□□□□□ -0.53
CSNK1D-212ENST00000580061 NPIPB6E9PJ23 425 aa11.72□□□□□ -0.53
CSNK1D-212ENST00000580061 DUSP14O95147 198 aaKnown RBP11.72□□□□□ -0.53
CSNK1D-212ENST00000580061 TCRAP04437 139 aa11.72□□□□□ -0.53
CSNK1D-212ENST00000580061 OR4B1Q8NGF8 309 aa11.72□□□□□ -0.53
CSNK1D-212ENST00000580061 OR10J6PQ8NGY7 276 aa11.72□□□□□ -0.53
CSNK1D-212ENST00000580061 FAM210AQ96ND0 272 aa11.72□□□□□ -0.53
CSNK1D-212ENST00000580061 TXNDC17Q9BRA2 123 aa11.72□□□□□ -0.53
CSNK1D-212ENST00000580061 TCEAL7Q9BRU2 100 aa11.72□□□□□ -0.53
CSNK1D-212ENST00000580061 TUBA4BQ9H853 241 aa11.72□□□□□ -0.53
CSNK1D-212ENST00000580061 VAX2Q9UIW0 290 aa11.72□□□□□ -0.53
CSNK1D-212ENST00000580061 SERTM2A0A1B0GWG4 89 aa11.71□□□□□ -0.53
CSNK1D-212ENST00000580061 RBMY1BA6NDE4 496 aaKnown RBP11.71□□□□□ -0.53
CSNK1D-212ENST00000580061 RBMY1EA6NEQ0 496 aaKnown RBP11.71□□□□□ -0.53
CSNK1D-212ENST00000580061 RBFOX3A6NFN3 312 aa11.71□□□□□ -0.53
CSNK1D-212ENST00000580061 IGKV3-20P01619 116 aa11.71□□□□□ -0.53
CSNK1D-212ENST00000580061 RBMY1DP0C7P1 496 aaKnown RBP11.71□□□□□ -0.53
CSNK1D-212ENST00000580061 MEF2BQ02080 365 aaPredicted RBP11.71□□□□□ -0.53
CSNK1D-212ENST00000580061 LINC00322Q6ZN03 302 aaPredicted RBP11.71□□□□□ -0.53
CSNK1D-212ENST00000580061 C9orf47Q6ZRZ4 202 aa11.71□□□□□ -0.53
CSNK1D-212ENST00000580061 GOLT1AQ6ZVE7 132 aa11.71□□□□□ -0.53
CSNK1D-212ENST00000580061 HIST1H2BAQ96A08 127 aa11.71□□□□□ -0.53
CSNK1D-212ENST00000580061 CLUHP3Q96NS8 147 aa11.71□□□□□ -0.53
CSNK1D-212ENST00000580061 RARRES2Q99969 163 aa11.71□□□□□ -0.53
CSNK1D-212ENST00000580061 ATG101Q9BSB4 218 aa11.71□□□□□ -0.53
CSNK1D-212ENST00000580061 LOC102724200A0A096LPH7 203 aaPredicted RBP11.7□□□□□ -0.54
CSNK1D-212ENST00000580061 PEX7O00628 323 aa11.7□□□□□ -0.54
CSNK1D-212ENST00000580061 RPL35AP18077 110 aaKnown RBP11.7□□□□□ -0.54
CSNK1D-212ENST00000580061 ERCC8Q13216 396 aa11.7□□□□□ -0.54
CSNK1D-212ENST00000580061 ZNF506Q5JVG8 444 aa11.7□□□□□ -0.54
CSNK1D-212ENST00000580061 CYB561D1Q8N8Q1 229 aa11.7□□□□□ -0.54
CSNK1D-212ENST00000580061 LINC00477Q96M19 166 aa11.7□□□□□ -0.54
CSNK1D-212ENST00000580061 VGLL1Q99990 258 aa11.7□□□□□ -0.54
CSNK1D-212ENST00000580061 AGPAT4-IT1Q9H0P7 198 aa11.7□□□□□ -0.54
CSNK1D-212ENST00000580061 SCO2A0A1W2PP80 73 aa11.69□□□□□ -0.54
CSNK1D-212ENST00000580061 F6UZH7 168 aa11.69□□□□□ -0.54
CSNK1D-212ENST00000580061 DEFA6Q01524 100 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms