RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	DMBT1	Q9UGM3	2413 aa	Predicted RBP	3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	TRBV19	A0A075B6N1	114 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329		A0A0J9YY99	117 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	GAGE12B	A1L429	117 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	C16orf90	A8MZG2	172 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	TSC22D2	O75157	780 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	SCGB2A1	O75556	95 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	MED6	O75586	246 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	EIF3G	O75821	320 aa	Known RBP eCLIP	3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	GAGE7	O76087	117 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	CST7	O76096	145 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	DUSP14	O95147	198 aa	Known RBP	3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	NUDT3	O95989	172 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	IFNA21	P01568	189 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	ATP5G1	P05496	136 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	OR5G3	P0C626	314 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	GAGE12F	P0CL80	117 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	GAGE12G	P0CL81	117 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	GAGE12I	P0CL82	117 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	PYY	P10082	97 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	ANXA3	P12429	323 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	RPL7	P18124	248 aa	Known RBP	3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	CDKN1B	P46527	198 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	ATP5G3	P48201	142 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	FAM3B	P58499	235 aa	Predicted RBP	3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	TAS2R30	P59541	319 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	KRTAP10-1	P60331	282 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	SELENOT	P62341	195 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	LINC00305	Q7Z4B0	112 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	SPATA12	Q7Z6I5	190 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	UBE2DNL	Q8IWF7	75 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	EXOC3-AS1	Q8N2X6	119 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	MAPKAPK5-AS1	Q8N8E1	139 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	C15orf53	Q8NAA6	179 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	RXFP4	Q8TDU9	374 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	TMEM263	Q8WUH6	116 aa	Known RBP	3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	CHAC2	Q8WUX2	184 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	DEDD2	Q8WXF8	326 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	PPP1R14B	Q96C90	147 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	C18orf15	Q96N68	181 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	GPR82	Q96P67	336 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	LINC01587	Q99440	93 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	VGLL1	Q99990	258 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	C7orf50	Q9BRJ6	194 aa	Known RBP	3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329		Q9H3A6	140 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329		Q9H8V8	135 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	NPVF	Q9HCQ7	196 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	GSN-AS1	Q9NRJ2	163 aa		3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	MRPS16	Q9Y3D3	137 aa	Known RBP	3.03	□□□□□ -1.92
PPP4R1-209	ENST00000578329	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	TRAV12-3	A0A0B4J271	114 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	TEX48	A0A1B0GUV7	120 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	SMCO3	A2RU48	225 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329		H7BYZ3	331 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329		J3KRW8	73 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	SPINK4	O60575	86 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	IGKV2D-40	P01614	121 aa	Predicted RBP	3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	FABP1	P07148	127 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	DNAH10OS	P0CZ25	163 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	HTN1	P15515	57 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	CRISP2	P16562	243 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	CXCL2	P19875	107 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	BTF3	P20290	206 aa	Known RBP	3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	LINC00315	P59091	139 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	AP3S2	P59780	193 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	DAZ2	Q13117	558 aa	Known RBP	3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	BTN1A1	Q13410	526 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	FHL2	Q14192	279 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	SAMD13	Q5VXD3	122 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	ZNF493	Q6ZR52	646 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	NRARP	Q7Z6K4	114 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	TMEM256	Q8N2U0	113 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	TMEM252	Q8N6L7	170 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	TVP23C	Q96ET8	276 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	C16orf74	Q96GX8	76 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	ODF3	Q96PU9	254 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	LINC00467	Q9BRT7	94 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	GGACT	Q9BVM4	153 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	SLC25A2	Q9BXI2	301 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	C20orf85	Q9H1P6	137 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	SLC39A9	Q9NUM3	307 aa		3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	3.02	□□□□□ -1.93
PPP4R1-209	ENST00000578329	TRAV6	A0A075B6T7	132 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	NAP1L6	A6NFF2	107 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329		H3BNG1	76 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	SIX6	O95475	246 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	SCGB1D2	O95969	90 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	TCRB	P04435	133 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	M6PR	P20645	277 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	FAU	P35544	74 aa	Known RBP	3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	RPL29	P47914	159 aa	Known RBP	3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	CAMLG	P49069	296 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	RAP2B	P61225	183 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	RHOB	P62745	196 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	NHLH2	Q02577	135 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	OR5I1	Q13606	314 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	RAB32	Q13637	225 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	LCE2A	Q5TA79	106 aa	Predicted RBP	3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	C10orf113	Q5VZT2	155 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	LCN15	Q6UWW0	184 aa		3.01	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms