RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 A6NDX4 124 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 F5H5K5 113 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 KRTAP4-16G5E9R7 235 aaPredicted RBP1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 J3QR89 54 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 CRXO43186 299 aaPredicted RBP1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 SYNGR1O43759 233 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 SYNGR2O43760 224 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 ANGPTL7O43827 346 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 DHRS3O75911 302 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 OR2J3O76001 311 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 OR7C1O76099 320 aaPredicted RBP1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 LEPROTL1O95214 131 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 NCR2O95944 276 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 IGKV1-39P01597 117 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 IGKV1-5P01602 117 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 IGLV3-1P01715 115 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 RBP4P02753 201 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 PRB2P02812 416 aaPredicted RBP1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 IGKV1D-39P04432 117 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 IGKV3-11P04433 115 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 IFI6P09912 130 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 SPINK8P0C7L1 97 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 ARL14EPLP0DKL9 152 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 ZNF823P16415 610 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 ZNF32P17041 273 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 HMGA1P17096 107 aaKnown RBP1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 COL8A2P25067 703 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 REG1BP48304 166 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 DLX1P56177 255 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 TCTAP57738 103 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 HBG1P69891 147 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 HBG2P69892 147 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 PRDX1Q06830 199 aaKnown RBP1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 CATR1Q13166 79 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 SRSF6Q13247 344 aaKnown RBP1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 C1orf61Q13536 156 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 WFDC2Q14508 124 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 KISS1Q15726 138 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 PIGYQ3MUY2 71 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 ETDBQ3ZM63 59 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 DEFB134Q4QY38 66 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 C5orf47Q569G3 176 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 LINC01545Q5VT33 79 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 CARD17Q5XLA6 110 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 TMEM215Q68D42 235 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 Q6ZR03 302 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 C6orf223Q8N319 242 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 Q8N9W7 124 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 MDS2Q8NDY4 140 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 OR2A1Q8NGT9 310 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 ATP6V0E2Q8NHE4 81 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 NT5CQ8TCD5 201 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 PP6455Q8WZ26 134 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 FGF14Q92915 247 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 COX14Q96I36 57 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 ADTRPQ96IZ2 230 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 GGTLC1Q9BX51 225 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 PKIBQ9C010 78 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 RAB1BQ9H0U4 201 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 RNASE7Q9H1E1 156 aaKnown RBP1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 MS4A6AQ9H2W1 248 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 VCX2Q9H322 139 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 CCL28Q9NRJ3 127 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 OSTCQ9NRP0 149 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 PSENENQ9NZ42 101 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 MTCH1Q9NZJ7 389 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 KLK12Q9UKR0 248 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 ZNF257Q9Y2Q1 563 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 MPC1Q9Y5U8 109 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 F11RQ9Y624 299 aaKnown RBP1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 LY96Q9Y6Y9 160 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 ARHGAP21Q5T5U3 1957 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 DOCK11Q5JSL3 2073 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 ATG2BQ96BY7 2078 aa1.41□□□□□ -2.18
PTP4A1-204ENST00000578299 COL5A1P20908 1838 aaPredicted RBP1.4□□□□□ -2.18
PTP4A1-204ENST00000578299 PTPRSQ13332 1948 aa1.4□□□□□ -2.18
PTP4A1-204ENST00000578299 GTF3C1Q12789 2109 aa1.4□□□□□ -2.18
PTP4A1-204ENST00000578299 MYOFQ9NZM1 2061 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 TNRC6AQ8NDV7 1962 aaKnown RBP1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 IGKV1-27A0A075B6S5 117 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 TMED7-TICAM2A0A0A6YYA0 188 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 TRAV5A0A0B4J249 113 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 TRAV25A0A0B4J276 109 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 CCL15-CCL14A0A0B4J2E2 113 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 IGKV1-6A0A0C4DH72 117 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 IGKV1-12A0A0C4DH73 117 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 CENPVL3A0A0U1RRI6 287 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 A0A1B0GXF2 115 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 A0A1W2PRE2 83 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 SMIM27A0A1W2PRY6 76 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 SMIM9A6NGZ8 99 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 FABP5P3A8MUU1 101 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 C21orf140B9A014 251 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 FNDC10F2Z333 226 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 K7EMI3 77 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 NBR2O15453 112 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 PDCD6O75340 191 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 FCN3O75636 299 aa1.4□□□□□ -2.19
PTP4A1-204ENST00000578299 KLF7O75840 302 aaPredicted RBP1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms