RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 GOLT1AQ6ZVE7 132 aa14.07□□□□□ -0.16
PRKCA-203ENST00000578063 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.07□□□□□ -0.16
PRKCA-203ENST00000578063 DLX4Q92988 240 aaPredicted RBP14.07□□□□□ -0.16
PRKCA-203ENST00000578063 MRPL53Q96EL3 112 aaKnown RBP14.07□□□□□ -0.16
PRKCA-203ENST00000578063 LINC00479Q96M42 142 aa14.07□□□□□ -0.16
PRKCA-203ENST00000578063 ISLRO14498 428 aa14.06□□□□□ -0.16
PRKCA-203ENST00000578063 FOLR2P14207 255 aa14.06□□□□□ -0.16
PRKCA-203ENST00000578063 NDUFA11Q86Y39 141 aa14.06□□□□□ -0.16
PRKCA-203ENST00000578063 TMEM75Q8N9X5 138 aa14.06□□□□□ -0.16
PRKCA-203ENST00000578063 C16orf92Q96LL3 132 aa14.06□□□□□ -0.16
PRKCA-203ENST00000578063 SETD2Q9BYW2 2564 aaPredicted RBP14.06□□□□□ -0.16
PRKCA-203ENST00000578063 A0A087WWC5 75 aa14.05□□□□□ -0.16
PRKCA-203ENST00000578063 TRAV8-2A0A0B4J237 113 aa14.05□□□□□ -0.16
PRKCA-203ENST00000578063 TRAV34A0A0B4J273 112 aa14.05□□□□□ -0.16
PRKCA-203ENST00000578063 TRBV6-1A0A0K0K1D8 114 aa14.05□□□□□ -0.16
PRKCA-203ENST00000578063 PGPEP1LA6NFU8 196 aa14.05□□□□□ -0.16
PRKCA-203ENST00000578063 OCC1Q8TAD7 63 aa14.05□□□□□ -0.16
PRKCA-203ENST00000578063 SMIM12Q96EX1 92 aa14.05□□□□□ -0.16
PRKCA-203ENST00000578063 C2CD3Q4AC94 2353 aa14.05□□□□□ -0.16
PRKCA-203ENST00000578063 ADARB2-AS1A8MUL3 147 aa14.04□□□□□ -0.16
PRKCA-203ENST00000578063 SOCS3O14543 225 aa14.04□□□□□ -0.16
PRKCA-203ENST00000578063 TSPAN4O14817 238 aa14.04□□□□□ -0.16
PRKCA-203ENST00000578063 IGFL4Q6B9Z1 124 aa14.04□□□□□ -0.16
PRKCA-203ENST00000578063 ISOC2Q96AB3 205 aa14.04□□□□□ -0.16
PRKCA-203ENST00000578063 FBLL1A6NHQ2 334 aaKnown RBP14.04□□□□□ -0.16
PRKCA-203ENST00000578063 HLA-DMBP28068 263 aa14.04□□□□□ -0.16
PRKCA-203ENST00000578063 KRTAP10-3P60369 221 aa14.04□□□□□ -0.16
PRKCA-203ENST00000578063 LCN12Q6JVE5 192 aa14.04□□□□□ -0.16
PRKCA-203ENST00000578063 BAGE2Q86Y30 109 aa14.04□□□□□ -0.16
PRKCA-203ENST00000578063 MLXQ9UH92 298 aa14.04□□□□□ -0.16
PRKCA-203ENST00000578063 LTAP01374 205 aa14.03□□□□□ -0.16
PRKCA-203ENST00000578063 MT-ND4LP03901 98 aa14.03□□□□□ -0.16
PRKCA-203ENST00000578063 BTN1A1Q13410 526 aa14.03□□□□□ -0.16
PRKCA-203ENST00000578063 PSG3Q16557 428 aa14.03□□□□□ -0.16
PRKCA-203ENST00000578063 Q86TA4 180 aa14.03□□□□□ -0.16
PRKCA-203ENST00000578063 RNF182Q8N6D2 247 aa14.03□□□□□ -0.16
PRKCA-203ENST00000578063 AURKAIP1Q9NWT8 199 aaPredicted RBP14.03□□□□□ -0.16
PRKCA-203ENST00000578063 TEP1Q99973 2627 aaKnown RBP14.02□□□□□ -0.16
PRKCA-203ENST00000578063 IGLV2-11P01706 119 aa14.02□□□□□ -0.16
PRKCA-203ENST00000578063 FLI1Q01543 452 aaPredicted RBP14.02□□□□□ -0.16
PRKCA-203ENST00000578063 NSUN5P1Q3KNT7 163 aa14.02□□□□□ -0.16
PRKCA-203ENST00000578063 ADAMTSL5Q6ZMM2 481 aa14.02□□□□□ -0.16
PRKCA-203ENST00000578063 CTDSP1Q9GZU7 261 aa14.02□□□□□ -0.16
PRKCA-203ENST00000578063 SMCO4Q9NRQ5 59 aa14.02□□□□□ -0.16
PRKCA-203ENST00000578063 TRAV8-1A0A0A6YYK1 113 aa14.01□□□□□ -0.17
PRKCA-203ENST00000578063 K7EN84 100 aa14.01□□□□□ -0.17
PRKCA-203ENST00000578063 IGLV2-8P01709 118 aa14.01□□□□□ -0.17
PRKCA-203ENST00000578063 RNF212Q495C1 297 aa14.01□□□□□ -0.17
PRKCA-203ENST00000578063 SGK494Q96LW2 274 aa14.01□□□□□ -0.17
PRKCA-203ENST00000578063 TMEM242Q9NWH2 141 aa14.01□□□□□ -0.17
PRKCA-203ENST00000578063 IGKV3-7A0A075B6H7 116 aa14.01□□□□□ -0.17
PRKCA-203ENST00000578063 RBAKDNA6NC62 111 aa14.01□□□□□ -0.17
PRKCA-203ENST00000578063 OVOL1O14753 267 aa14.01□□□□□ -0.17
PRKCA-203ENST00000578063 CSN3P07498 182 aa14.01□□□□□ -0.17
PRKCA-203ENST00000578063 ID1P41134 155 aa14.01□□□□□ -0.17
PRKCA-203ENST00000578063 TMEM88Q6PEY1 159 aa14.01□□□□□ -0.17
PRKCA-203ENST00000578063 CBLN2Q8IUK8 224 aa14.01□□□□□ -0.17
PRKCA-203ENST00000578063 DCANP1Q8TF63 244 aa14.01□□□□□ -0.17
PRKCA-203ENST00000578063 ANAPC16Q96DE5 110 aa14.01□□□□□ -0.17
PRKCA-203ENST00000578063 PSG8Q9UQ74 426 aa14.01□□□□□ -0.17
PRKCA-203ENST00000578063 IGKV2-40A0A087WW87 121 aaPredicted RBP14□□□□□ -0.17
PRKCA-203ENST00000578063 ZNF705FA8MVS1 300 aaPredicted RBP14□□□□□ -0.17
PRKCA-203ENST00000578063 DNASE2O00115 360 aaPredicted RBP14□□□□□ -0.17
PRKCA-203ENST00000578063 GCGP01275 180 aa14□□□□□ -0.17
PRKCA-203ENST00000578063 IGKV2D-40P01614 121 aaPredicted RBP14□□□□□ -0.17
PRKCA-203ENST00000578063 MGST1P10620 155 aaKnown RBP14□□□□□ -0.17
PRKCA-203ENST00000578063 PRNTQ86SH4 94 aa14□□□□□ -0.17
PRKCA-203ENST00000578063 DYNLRB2Q8TF09 96 aa14□□□□□ -0.17
PRKCA-203ENST00000578063 SFRP2Q96HF1 295 aa14□□□□□ -0.17
PRKCA-203ENST00000578063 MS4A6AQ9H2W1 248 aa14□□□□□ -0.17
PRKCA-203ENST00000578063 ZFP30Q9Y2G7 519 aa14□□□□□ -0.17
PRKCA-203ENST00000578063 JMJD1CQ15652 2540 aa14□□□□□ -0.17
PRKCA-203ENST00000578063 PPP1R2P9O14990 202 aa13.99□□□□□ -0.17
PRKCA-203ENST00000578063 NHLRC2Q8NBF2 726 aa13.99□□□□□ -0.17
PRKCA-203ENST00000578063 MLST8Q9BVC4 326 aa13.99□□□□□ -0.17
PRKCA-203ENST00000578063 TUBA4BQ9H853 241 aa13.99□□□□□ -0.17
PRKCA-203ENST00000578063 SIGLEC8Q9NYZ4 499 aa13.99□□□□□ -0.17
PRKCA-203ENST00000578063 CXorf65A6NEN9 183 aa13.98□□□□□ -0.17
PRKCA-203ENST00000578063 PAFAH1B2P68402 229 aa13.98□□□□□ -0.17
PRKCA-203ENST00000578063 TMEM183AQ8IXX5 376 aa13.98□□□□□ -0.17
PRKCA-203ENST00000578063 GBGT1Q8N5D6 347 aa13.98□□□□□ -0.17
PRKCA-203ENST00000578063 ZNF738Q8NE65 137 aa13.98□□□□□ -0.17
PRKCA-203ENST00000578063 BIN3Q9NQY0 253 aa13.98□□□□□ -0.17
PRKCA-203ENST00000578063 SELENOKQ9Y6D0 94 aa13.98□□□□□ -0.17
PRKCA-203ENST00000578063 H7BYZ3 331 aa13.98□□□□□ -0.17
PRKCA-203ENST00000578063 C20orf173Q96LM9 149 aa13.98□□□□□ -0.17
PRKCA-203ENST00000578063 PRAC2D3DTV9 90 aa13.97□□□□□ -0.17
PRKCA-203ENST00000578063 OR5I1Q13606 314 aa13.97□□□□□ -0.17
PRKCA-203ENST00000578063 TRAV2A0A0B4J234 112 aa13.96□□□□□ -0.17
PRKCA-203ENST00000578063 K7EQG2 157 aa13.96□□□□□ -0.17
PRKCA-203ENST00000578063 PRB4P10163 310 aaPredicted RBP13.96□□□□□ -0.17
PRKCA-203ENST00000578063 ERVFC1-1P60608 527 aa13.96□□□□□ -0.17
PRKCA-203ENST00000578063 SAPCD1Q5SSQ6 148 aa13.96□□□□□ -0.17
PRKCA-203ENST00000578063 RBPMS2Q6ZRY4 209 aaKnown RBP13.96□□□□□ -0.17
PRKCA-203ENST00000578063 C15orf54Q8N8G6 183 aa13.96□□□□□ -0.17
PRKCA-203ENST00000578063 OR10G8Q8NGN5 311 aa13.96□□□□□ -0.17
PRKCA-203ENST00000578063 VGLL1Q99990 258 aa13.96□□□□□ -0.17
PRKCA-203ENST00000578063 SNRPD3P62318 126 aaKnown RBP13.95□□□□□ -0.18
PRKCA-203ENST00000578063 WFDC3Q8IUB2 231 aa13.95□□□□□ -0.18
PRKCA-203ENST00000578063 CITED1Q99966 193 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms