RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 PARD6GQ9BYG4 376 aaPredicted RBP6.91□□□□□ -1.3
NPLOC4-220ENST00000576940 LRP1Q07954 4544 aaKnown RBP6.9□□□□□ -1.3
NPLOC4-220ENST00000576940 A0A087WTM6 91 aa6.9□□□□□ -1.3
NPLOC4-220ENST00000576940 C9orf170A2RU37 121 aa6.9□□□□□ -1.3
NPLOC4-220ENST00000576940 H3BNG1 76 aa6.9□□□□□ -1.3
NPLOC4-220ENST00000576940 CFDP00746 253 aaPredicted RBP6.9□□□□□ -1.3
NPLOC4-220ENST00000576940 IAPPP10997 89 aa6.9□□□□□ -1.3
NPLOC4-220ENST00000576940 CXCL3P19876 107 aa6.9□□□□□ -1.3
NPLOC4-220ENST00000576940 CDKN1BP46527 198 aa6.9□□□□□ -1.3
NPLOC4-220ENST00000576940 ATP5IP56385 69 aaPredicted RBP6.9□□□□□ -1.3
NPLOC4-220ENST00000576940 PSG3Q16557 428 aa6.9□□□□□ -1.3
NPLOC4-220ENST00000576940 C12orf45Q8N5I9 185 aaPredicted RBP6.9□□□□□ -1.3
NPLOC4-220ENST00000576940 CACFD1Q9UGQ2 172 aa6.9□□□□□ -1.3
NPLOC4-220ENST00000576940 SLC45A2Q9UMX9 530 aa6.9□□□□□ -1.3
NPLOC4-220ENST00000576940 DUXBA0A1W2PPF3 345 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 G3V3Q6 166 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 H7BYZ3 331 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 SSNA1O43805 119 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 ADAP1O75689 374 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 SFT2D2O95562 160 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 RLN2P04090 185 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 SNRPCP09234 159 aaKnown RBP6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 GCSHP23434 173 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 RAB11AP62491 216 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 SRPXP78539 464 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 CD300CQ08708 224 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 ZFP69Q49AA0 526 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 C4orf46Q504U0 113 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 Q6ZSN1 163 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 CCDC28AQ8IWP9 274 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 BPIFCQ8NFQ6 507 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 OR1S1Q8NH92 325 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 IL22RA2Q969J5 263 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 GPR82Q96P67 336 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 SEC22CQ9BRL7 303 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 TMEM147Q9BVK8 224 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 TMPRSS5Q9H3S3 457 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 MGAT4CQ9UBM8 478 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 KCNIP3Q9Y2W7 256 aa6.89□□□□□ -1.31
NPLOC4-220ENST00000576940 HMSDA8MTL9 139 aa6.88□□□□□ -1.31
NPLOC4-220ENST00000576940 SNURFLB1AK76 121 aa6.88□□□□□ -1.31
NPLOC4-220ENST00000576940 NXPH4O95158 308 aa6.88□□□□□ -1.31
NPLOC4-220ENST00000576940 CYCSP99999 105 aaKnown RBP6.88□□□□□ -1.31
NPLOC4-220ENST00000576940 PPP1R1AQ13522 171 aa6.88□□□□□ -1.31
NPLOC4-220ENST00000576940 Q6ZTI0 123 aa6.88□□□□□ -1.31
NPLOC4-220ENST00000576940 TMED4Q7Z7H5 227 aa6.88□□□□□ -1.31
NPLOC4-220ENST00000576940 LRRC20Q8TCA0 184 aa6.88□□□□□ -1.31
NPLOC4-220ENST00000576940 RPUSD4Q96CM3 377 aaKnown RBP6.88□□□□□ -1.31
NPLOC4-220ENST00000576940 PRAC2D3DTV9 90 aa6.87□□□□□ -1.31
NPLOC4-220ENST00000576940 PRSS46E5RG02 174 aa6.87□□□□□ -1.31
NPLOC4-220ENST00000576940 H3BRN7 92 aa6.87□□□□□ -1.31
NPLOC4-220ENST00000576940 J3KRW8 73 aa6.87□□□□□ -1.31
NPLOC4-220ENST00000576940 RGS13O14921 159 aa6.87□□□□□ -1.31
NPLOC4-220ENST00000576940 PITX3O75364 302 aa6.87□□□□□ -1.31
NPLOC4-220ENST00000576940 AKR1C4P17516 323 aa6.87□□□□□ -1.31
NPLOC4-220ENST00000576940 H2BFSP57053 126 aa6.87□□□□□ -1.31
NPLOC4-220ENST00000576940 IL15RAQ13261 267 aa6.87□□□□□ -1.31
NPLOC4-220ENST00000576940 GFI1BQ5VTD9 330 aa6.87□□□□□ -1.31
NPLOC4-220ENST00000576940 SHANK2-AS3Q9BTD1 123 aa6.87□□□□□ -1.31
NPLOC4-220ENST00000576940 NMES1Q9C002 83 aa6.87□□□□□ -1.31
NPLOC4-220ENST00000576940 FAT3Q8TDW7 4589 aa6.86□□□□□ -1.31
NPLOC4-220ENST00000576940 RPL7P18124 248 aaKnown RBP6.86□□□□□ -1.31
NPLOC4-220ENST00000576940 TRGV2A0A075B6R0 118 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 A0A087X0K7 114 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 TRAV12-3A0A0B4J271 114 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 PMS2P5A8MQ11 134 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 WRBO00258 174 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 HYPMO75409 117 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 OR5G3P0C626 314 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 SLC25A6P12236 298 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 S100A7P31151 101 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 AKR1C1Q04828 323 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 ZNF345Q14585 488 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 LYPD5Q6UWN5 251 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 CYP2G1PQ6ZSU1 146 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 NFE4Q86UQ8 179 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 OR2T35Q8NGX2 323 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 C20orf144Q9BQM9 153 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 GSN-AS1Q9NRJ2 163 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 FAM30AQ9NZY2 134 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 HIGD1AQ9Y241 93 aa6.85□□□□□ -1.31
NPLOC4-220ENST00000576940 H3BTX0 84 aa6.84□□□□□ -1.31
NPLOC4-220ENST00000576940 MRPS12O15235 138 aaKnown RBP6.84□□□□□ -1.31
NPLOC4-220ENST00000576940 CT45A10P0DMU9 189 aa6.84□□□□□ -1.31
NPLOC4-220ENST00000576940 DAZ2Q13117 558 aaKnown RBP6.84□□□□□ -1.31
NPLOC4-220ENST00000576940 SPANXN5Q5MJ07 72 aa6.84□□□□□ -1.31
NPLOC4-220ENST00000576940 PATE2Q6UY27 113 aa6.84□□□□□ -1.31
NPLOC4-220ENST00000576940 C9orf62Q8N4C0 152 aa6.84□□□□□ -1.31
NPLOC4-220ENST00000576940 TRGV1A0A0A0MS02 117 aa6.83□□□□□ -1.32
NPLOC4-220ENST00000576940 SMCO3A2RU48 225 aa6.83□□□□□ -1.32
NPLOC4-220ENST00000576940 KRTAP29-1A8MX34 341 aaPredicted RBP6.83□□□□□ -1.32
NPLOC4-220ENST00000576940 H3BP45 60 aa6.83□□□□□ -1.32
NPLOC4-220ENST00000576940 PAX4O43316 350 aa6.83□□□□□ -1.32
NPLOC4-220ENST00000576940 SYNGR2O43760 224 aa6.83□□□□□ -1.32
NPLOC4-220ENST00000576940 ZNF324O75467 553 aaPredicted RBP6.83□□□□□ -1.32
NPLOC4-220ENST00000576940 IGHV3-53P01767 116 aa6.83□□□□□ -1.32
NPLOC4-220ENST00000576940 LINC00869P0C866 280 aa6.83□□□□□ -1.32
NPLOC4-220ENST00000576940 VAMP1P23763 118 aa6.83□□□□□ -1.32
NPLOC4-220ENST00000576940 RPP30P78346 268 aaKnown RBP6.83□□□□□ -1.32
NPLOC4-220ENST00000576940 ACOT7LQ6ZUV0 252 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms