RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 FXYD6Q9H0Q3 95 aa4.43□□□□□ -1.7
RAB40B-210ENST00000576148 MED4Q9NPJ6 270 aa4.43□□□□□ -1.7
RAB40B-210ENST00000576148 A0A087X0K7 114 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 IGHV3-16A0A0C4DH30 117 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 PRAC2D3DTV9 90 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 GATA1P15976 413 aaPredicted RBP4.42□□□□□ -1.7
RAB40B-210ENST00000576148 RNASE4P34096 147 aaKnown RBP4.42□□□□□ -1.7
RAB40B-210ENST00000576148 GPX4P36969 197 aaPredicted RBP4.42□□□□□ -1.7
RAB40B-210ENST00000576148 BTN1A1Q13410 526 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 SPCS2Q15005 226 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 ELOBQ15370 118 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 TRAM1Q15629 374 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 DNAL1Q4LDG9 190 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 NMSQ5H8A3 153 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 Q6ZQT7 251 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 Q6ZRP5 223 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 OR4D10Q8NGI6 311 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 OR10G9Q8NGN4 311 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 OR52I2Q8NH67 350 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 UFD1Q92890 307 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 LINC00479Q96M42 142 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 AUNIPQ9H7T9 357 aa4.42□□□□□ -1.7
RAB40B-210ENST00000576148 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.42□□□□□ -1.7
RAB40B-210ENST00000576148 TRAV18A0A075B6X5 111 aa4.41□□□□□ -1.7
RAB40B-210ENST00000576148 RGS10O43665 173 aa4.41□□□□□ -1.7
RAB40B-210ENST00000576148 POLR2GP62487 172 aaKnown RBP eCLIP4.41□□□□□ -1.7
RAB40B-210ENST00000576148 SPHARQ15513 63 aa4.41□□□□□ -1.7
RAB40B-210ENST00000576148 GPR107Q5VW38 600 aa4.41□□□□□ -1.7
RAB40B-210ENST00000576148 NIT1Q86X76 327 aa4.41□□□□□ -1.7
RAB40B-210ENST00000576148 LGI3Q8N145 548 aa4.41□□□□□ -1.7
RAB40B-210ENST00000576148 SLC25A29Q8N8R3 303 aa4.41□□□□□ -1.7
RAB40B-210ENST00000576148 TMEM75Q8N9X5 138 aa4.41□□□□□ -1.7
RAB40B-210ENST00000576148 SLC25A38Q96DW6 304 aa4.41□□□□□ -1.7
RAB40B-210ENST00000576148 SPXQ9BT56 116 aa4.41□□□□□ -1.7
RAB40B-210ENST00000576148 MND1Q9BWT6 205 aa4.41□□□□□ -1.7
RAB40B-210ENST00000576148 CDIP1Q9H305 208 aa4.41□□□□□ -1.7
RAB40B-210ENST00000576148 ZNF331Q9NQX6 463 aaPredicted RBP4.41□□□□□ -1.7
RAB40B-210ENST00000576148 C8orf4Q9NR00 106 aa4.41□□□□□ -1.7
RAB40B-210ENST00000576148 A0A087WWC5 75 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.4□□□□□ -1.71
RAB40B-210ENST00000576148 KLLNB2CW77 178 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 H3BRN7 92 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 HLA-DQA1P01909 254 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 PMP2P02689 132 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 GPX1P07203 203 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 CFC1BP0CG36 223 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 SMIM18P0DKX4 95 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 CRYGAP11844 174 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 CXCL2P19875 107 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 ANXA7P20073 488 aaKnown RBP4.4□□□□□ -1.71
RAB40B-210ENST00000576148 RAP2BP61225 183 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 RAB31Q13636 194 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 OPCMLQ14982 345 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 RHOHQ15669 191 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 TMEM183BQ1AE95 376 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 AARDQ4LEZ3 155 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 LCN15Q6UWW0 184 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 AHSA2Q719I0 299 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 TMEM183AQ8IXX5 376 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 SLC50A1Q9BRV3 221 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 SHANK2-AS3Q9BTD1 123 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 IFT46Q9NQC8 304 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 U3KQ87 197 aa4.4□□□□□ -1.71
RAB40B-210ENST00000576148 A0A087WX48 190 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 TRAV1-2A0A0B4J238 106 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 A0A0G2JRQ6 117 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 TRBV6-4A0A1B0GX49 114 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 PGPA6NDG6 321 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 MEIS3P1A6NDR6 274 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 PMS2P5A8MQ11 134 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 IFNA7P01567 189 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 PI3P19957 117 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 RAB3BP20337 219 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 TAS2R46P59540 309 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 FABP5Q01469 135 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 GUK1Q16774 197 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 MAJINQ3KP22 176 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 DMRTA1Q5VZB9 504 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 KCNIP4Q6PIL6 250 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 STPG4Q8N801 248 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 CLRN3Q8NCR9 226 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 TRIM63Q969Q1 353 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 MUC17Q685J3 4493 aa4.39□□□□□ -1.71
RAB40B-210ENST00000576148 MUC21A0A0G2JKD1 596 aa4.38□□□□□ -1.71
RAB40B-210ENST00000576148 FBLL1A6NHQ2 334 aaKnown RBP4.38□□□□□ -1.71
RAB40B-210ENST00000576148 TCRBP04435 133 aa4.38□□□□□ -1.71
RAB40B-210ENST00000576148 MYL9P24844 172 aa4.38□□□□□ -1.71
RAB40B-210ENST00000576148 HLA-DMAP28067 261 aa4.38□□□□□ -1.71
RAB40B-210ENST00000576148 C1orf146Q5VVC0 180 aa4.38□□□□□ -1.71
RAB40B-210ENST00000576148 S100A7AQ86SG5 101 aa4.38□□□□□ -1.71
RAB40B-210ENST00000576148 DHRSXQ8N5I4 330 aa4.38□□□□□ -1.71
RAB40B-210ENST00000576148 OR1S1Q8NH92 325 aa4.38□□□□□ -1.71
RAB40B-210ENST00000576148 TP53RKQ96S44 253 aa4.38□□□□□ -1.71
RAB40B-210ENST00000576148 ACOT13Q9NPJ3 140 aa4.38□□□□□ -1.71
RAB40B-210ENST00000576148 RNF24Q9Y225 148 aa4.38□□□□□ -1.71
RAB40B-210ENST00000576148 HIGD1AQ9Y241 93 aa4.38□□□□□ -1.71
RAB40B-210ENST00000576148 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
RAB40B-210ENST00000576148 IGLV1-50A0A075B6I6 118 aa4.37□□□□□ -1.71
RAB40B-210ENST00000576148 TRAV1-1A0A0B4J248 108 aa4.37□□□□□ -1.71
RAB40B-210ENST00000576148 hDV102S1A0JD36 115 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms