RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 FAM231DQ6ZW35 169 aa8.15□□□□□ -1.1
USP43-205ENST00000574408 AP1S3Q96PC3 154 aa8.15□□□□□ -1.1
USP43-205ENST00000574408 ASCL2Q99929 193 aa8.15□□□□□ -1.1
USP43-205ENST00000574408 CLEC3BP05452 202 aa8.15□□□□□ -1.1
USP43-205ENST00000574408 COA6Q5JTJ3 125 aaKnown RBP8.15□□□□□ -1.1
USP43-205ENST00000574408 RNASE8Q8TDE3 154 aaKnown RBP8.15□□□□□ -1.1
USP43-205ENST00000574408 ZNF414Q96IQ9 312 aa8.15□□□□□ -1.1
USP43-205ENST00000574408 RCHY1Q96PM5 261 aa8.15□□□□□ -1.1
USP43-205ENST00000574408 MEGF9Q9H1U4 602 aa8.15□□□□□ -1.1
USP43-205ENST00000574408 CELSR1Q9NYQ6 3014 aa8.15□□□□□ -1.11
USP43-205ENST00000574408 TRBV9A0A0B4J1U6 114 aa8.15□□□□□ -1.11
USP43-205ENST00000574408 SMIM27A0A1W2PRY6 76 aa8.15□□□□□ -1.11
USP43-205ENST00000574408 H3BUX3 64 aa8.15□□□□□ -1.11
USP43-205ENST00000574408 LTAP01374 205 aa8.15□□□□□ -1.11
USP43-205ENST00000574408 PRNTQ86SH4 94 aa8.15□□□□□ -1.11
USP43-205ENST00000574408 MLST8Q9BVC4 326 aa8.15□□□□□ -1.11
USP43-205ENST00000574408 RABAC1Q9UI14 185 aa8.15□□□□□ -1.11
USP43-205ENST00000574408 LAMTOR2Q9Y2Q5 125 aa8.15□□□□□ -1.11
USP43-205ENST00000574408 MUC21A0A0G2JKD1 596 aa8.14□□□□□ -1.11
USP43-205ENST00000574408 MUC21A0A140T8X8 626 aa8.14□□□□□ -1.11
USP43-205ENST00000574408 M0QZK8 103 aa8.14□□□□□ -1.11
USP43-205ENST00000574408 M0R3E3 92 aa8.14□□□□□ -1.11
USP43-205ENST00000574408 AVPP01185 164 aa8.14□□□□□ -1.11
USP43-205ENST00000574408 MUC21Q5SSG8 566 aa8.14□□□□□ -1.11
USP43-205ENST00000574408 CLEC19AQ6UXS0 136 aa8.14□□□□□ -1.11
USP43-205ENST00000574408 Q86TA4 180 aa8.14□□□□□ -1.11
USP43-205ENST00000574408 CELSR2Q9HCU4 2923 aa8.14□□□□□ -1.11
USP43-205ENST00000574408 TRAV41A0A0B4J266 112 aa8.14□□□□□ -1.11
USP43-205ENST00000574408 SLC25A16P16260 332 aa8.14□□□□□ -1.11
USP43-205ENST00000574408 ZNF138P52744 262 aa8.14□□□□□ -1.11
USP43-205ENST00000574408 SMIM12Q96EX1 92 aa8.14□□□□□ -1.11
USP43-205ENST00000574408 UBR5O95071 2799 aaPredicted RBP8.14□□□□□ -1.11
USP43-205ENST00000574408 BMPR1BO00238 502 aa8.13□□□□□ -1.11
USP43-205ENST00000574408 RPL7P18124 248 aaKnown RBP8.13□□□□□ -1.11
USP43-205ENST00000574408 COL8A1P27658 744 aa8.13□□□□□ -1.11
USP43-205ENST00000574408 LINC00322Q6ZN03 302 aaPredicted RBP8.13□□□□□ -1.11
USP43-205ENST00000574408 MBD6Q96DN6 1003 aa8.13□□□□□ -1.11
USP43-205ENST00000574408 GRAMD2BQ96HH9 432 aa8.13□□□□□ -1.11
USP43-205ENST00000574408 CCDC140Q96MF4 163 aa8.13□□□□□ -1.11
USP43-205ENST00000574408 Q71RC1 249 aaPredicted RBP8.13□□□□□ -1.11
USP43-205ENST00000574408 LYPD1Q8N2G4 141 aa8.13□□□□□ -1.11
USP43-205ENST00000574408 MAPK1IP1LQ8NDC0 245 aa8.13□□□□□ -1.11
USP43-205ENST00000574408 RAB37Q96AX2 223 aa8.13□□□□□ -1.11
USP43-205ENST00000574408 EEF1AKMT3Q96AZ1 226 aa8.13□□□□□ -1.11
USP43-205ENST00000574408 RNF114Q9Y508 228 aa8.13□□□□□ -1.11
USP43-205ENST00000574408 IZUMO1RA6ND01 250 aa8.13□□□□□ -1.11
USP43-205ENST00000574408 APCSP02743 223 aa8.13□□□□□ -1.11
USP43-205ENST00000574408 CIARTQ8N365 385 aaPredicted RBP8.13□□□□□ -1.11
USP43-205ENST00000574408 GNB1LQ9BYB4 327 aa8.13□□□□□ -1.11
USP43-205ENST00000574408 AAMDCQ9H7C9 122 aa8.13□□□□□ -1.11
USP43-205ENST00000574408 HSBP1L1C9JCN9 74 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 NUDT3O95989 172 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 IGLV2-11P01706 119 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 KLK9Q2XQG4 91 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 KLK9Q9UKQ9 250 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 P01737 135 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 PAX1P15863 534 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 RIPPLY3P57055 190 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 PDE6HQ13956 83 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 WDR73Q6P4I2 378 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 NUP35Q8NFH5 326 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 DAZAP1Q96EP5 407 aaKnown RBP8.12□□□□□ -1.11
USP43-205ENST00000574408 UQCR10Q9UDW1 63 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 A6NDX4 124 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 K7EQM0 130 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 C3orf79P0CE67 100 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 KRTAP10-9P60411 292 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 ATP5G2Q06055 141 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 TM4SF20Q53R12 229 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 TMEM136Q6ZRR5 245 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 ZNF738Q8NE65 137 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 TSKUQ8WUA8 353 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 ALKBH7Q9BT30 221 aaPredicted RBP8.12□□□□□ -1.11
USP43-205ENST00000574408 RPP21Q9H633 154 aaKnown RBP8.12□□□□□ -1.11
USP43-205ENST00000574408 FBN2P35556 2912 aa8.12□□□□□ -1.11
USP43-205ENST00000574408 HIGD1CA8MV81 97 aa8.11□□□□□ -1.11
USP43-205ENST00000574408 MT-ND6P03923 174 aa8.11□□□□□ -1.11
USP43-205ENST00000574408 TRGV3P03979 118 aa8.11□□□□□ -1.11
USP43-205ENST00000574408 FXYD7P58549 80 aa8.11□□□□□ -1.11
USP43-205ENST00000574408 PAFAH1B2P68402 229 aa8.11□□□□□ -1.11
USP43-205ENST00000574408 KLHDC1Q8N7A1 406 aa8.11□□□□□ -1.11
USP43-205ENST00000574408 LINC01356Q8N9X3 169 aa8.11□□□□□ -1.11
USP43-205ENST00000574408 ZFAND3Q9H8U3 227 aa8.11□□□□□ -1.11
USP43-205ENST00000574408 ZNF492Q9P255 531 aa8.11□□□□□ -1.11
USP43-205ENST00000574408 CSMD2Q7Z408 3487 aa8.11□□□□□ -1.11
USP43-205ENST00000574408 TMSB15BA0A087X1C1 80 aa8.11□□□□□ -1.11
USP43-205ENST00000574408 hDV102S1A0JD36 115 aa8.11□□□□□ -1.11
USP43-205ENST00000574408 CCL25O15444 150 aa8.11□□□□□ -1.11
USP43-205ENST00000574408 PSG8Q9UQ74 426 aa8.11□□□□□ -1.11
USP43-205ENST00000574408 IGHV3OR16-13A0A075B7E8 117 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 TRBV7-1A0A0A6YYK4 115 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 IGHV3-74A0A0B4J1X5 117 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 SERTM2A0A1B0GWG4 89 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 C19orf71A6NCJ1 209 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 GATA3P23771 443 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 CSN1S1P47710 185 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 COX19Q49B96 90 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 C19orf54Q5BKX5 351 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 TCF24Q7RTU0 167 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 WFDC3Q8IUB2 231 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms