RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 PCF11O94913 1555 aaKnown RBP-0.13□□□□□ -2.43
CDC27-216ENST00000574304 G3V2T6 193 aa-0.13□□□□□ -2.43
CDC27-216ENST00000574304 IGHV3-33P01772 117 aa-0.13□□□□□ -2.43
CDC27-216ENST00000574304 TRGC2P03986 189 aa-0.13□□□□□ -2.43
CDC27-216ENST00000574304 DIAPH2-AS1Q14236 149 aa-0.13□□□□□ -2.43
CDC27-216ENST00000574304 VMA21Q3ZAQ7 101 aa-0.13□□□□□ -2.43
CDC27-216ENST00000574304 HIST1H2BKO60814 126 aa-0.14□□□□□ -2.43
CDC27-216ENST00000574304 IFNA14P01570 189 aa-0.14□□□□□ -2.43
CDC27-216ENST00000574304 HIST1H2BJP06899 126 aa-0.14□□□□□ -2.43
CDC27-216ENST00000574304 CTXN2P0C2S0 81 aa-0.14□□□□□ -2.43
CDC27-216ENST00000574304 PDE6GP18545 87 aa-0.14□□□□□ -2.43
CDC27-216ENST00000574304 REEP5Q00765 189 aa-0.14□□□□□ -2.43
CDC27-216ENST00000574304 AKIRIN2Q53H80 203 aa-0.14□□□□□ -2.43
CDC27-216ENST00000574304 MALSU1Q96EH3 234 aa-0.14□□□□□ -2.43
CDC27-216ENST00000574304 GPX7Q96SL4 187 aaPredicted RBP-0.14□□□□□ -2.43
CDC27-216ENST00000574304 CST11Q9H112 138 aa-0.14□□□□□ -2.43
CDC27-216ENST00000574304 AIPO00170 330 aa-0.15□□□□□ -2.43
CDC27-216ENST00000574304 OGNP20774 298 aaKnown RBP-0.15□□□□□ -2.43
CDC27-216ENST00000574304 CAV3P56539 151 aa-0.15□□□□□ -2.43
CDC27-216ENST00000574304 NEDD8Q15843 81 aa-0.15□□□□□ -2.43
CDC27-216ENST00000574304 SCGB2B2Q4G0G5 96 aa-0.15□□□□□ -2.43
CDC27-216ENST00000574304 ZCCHC23Q6ZST2 131 aa-0.15□□□□□ -2.43
CDC27-216ENST00000574304 LYG2Q86SG7 212 aa-0.15□□□□□ -2.43
CDC27-216ENST00000574304 FAM216BQ8N7L0 139 aa-0.15□□□□□ -2.43
CDC27-216ENST00000574304 NAT8BQ9UHF3 227 aa-0.15□□□□□ -2.43
CDC27-216ENST00000574304 PRNDQ9UKY0 176 aa-0.15□□□□□ -2.43
CDC27-216ENST00000574304 PYCARDQ9ULZ3 195 aa-0.15□□□□□ -2.43
CDC27-216ENST00000574304 ZFYVE26Q68DK2 2539 aa-0.16□□□□□ -2.43
CDC27-216ENST00000574304 LRP1Q07954 4544 aaKnown RBP-0.16□□□□□ -2.43
CDC27-216ENST00000574304 A0A0J9YY99 117 aa-0.16□□□□□ -2.44
CDC27-216ENST00000574304 RIIAD1A6NNX1 92 aa-0.16□□□□□ -2.44
CDC27-216ENST00000574304 H7C1C5 153 aa-0.16□□□□□ -2.44
CDC27-216ENST00000574304 SULT1C4O75897 302 aa-0.16□□□□□ -2.44
CDC27-216ENST00000574304 IFNA6P05013 189 aa-0.16□□□□□ -2.44
CDC27-216ENST00000574304 LCN6P62502 163 aa-0.16□□□□□ -2.44
CDC27-216ENST00000574304 C10orf111Q8N326 155 aa-0.16□□□□□ -2.44
CDC27-216ENST00000574304 IGSF10Q6WRI0 2623 aa-0.16□□□□□ -2.44
CDC27-216ENST00000574304 DMBT1Q9UGM3 2413 aaPredicted RBP-0.16□□□□□ -2.44
CDC27-216ENST00000574304 PHBP35232 272 aa-0.17□□□□□ -2.44
CDC27-216ENST00000574304 AKR1C8PQ5T2L2 129 aa-0.17□□□□□ -2.44
CDC27-216ENST00000574304 C5orf17Q8NAS9 161 aa-0.17□□□□□ -2.44
CDC27-216ENST00000574304 CEP19Q96LK0 163 aa-0.17□□□□□ -2.44
CDC27-216ENST00000574304 SSR3Q9UNL2 185 aa-0.17□□□□□ -2.44
CDC27-216ENST00000574304 PRORSD1PA6NEY8 169 aa-0.18□□□□□ -2.44
CDC27-216ENST00000574304 APOA2P02652 100 aa-0.18□□□□□ -2.44
CDC27-216ENST00000574304 MT-ND6P03923 174 aa-0.18□□□□□ -2.44
CDC27-216ENST00000574304 PPP1R2P41236 205 aa-0.18□□□□□ -2.44
CDC27-216ENST00000574304 HBBP68871 147 aa-0.18□□□□□ -2.44
CDC27-216ENST00000574304 PBDC1Q9BVG4 233 aa-0.18□□□□□ -2.44
CDC27-216ENST00000574304 SS18L2Q9UHA2 77 aa-0.18□□□□□ -2.44
CDC27-216ENST00000574304 TPRKBQ9Y3C4 175 aa-0.18□□□□□ -2.44
CDC27-216ENST00000574304 MUC12Q9UKN1 5478 aa-0.18□□□□□ -2.44
CDC27-216ENST00000574304 NCOR2Q9Y618 2525 aa-0.19□□□□□ -2.44
CDC27-216ENST00000574304 UHRF1BP1Q6BDS2 1440 aa-0.19□□□□□ -2.44
CDC27-216ENST00000574304 TRAV5A0A0B4J249 113 aa-0.19□□□□□ -2.44
CDC27-216ENST00000574304 ATG12O94817 140 aa-0.19□□□□□ -2.44
CDC27-216ENST00000574304 ASB16-AS1Q495Z4 193 aa-0.19□□□□□ -2.44
CDC27-216ENST00000574304 GLYATL3Q5SZD4 288 aa-0.19□□□□□ -2.44
CDC27-216ENST00000574304 C1orf140Q5VVS0 124 aa-0.19□□□□□ -2.44
CDC27-216ENST00000574304 LINC00269Q8N2A0 174 aa-0.19□□□□□ -2.44
CDC27-216ENST00000574304 A0A1W2PRS3 328 aa-0.2□□□□□ -2.44
CDC27-216ENST00000574304 ATP5HO75947 161 aa-0.2□□□□□ -2.44
CDC27-216ENST00000574304 RPS3P23396 243 aaKnown RBP eCLIP-0.2□□□□□ -2.44
CDC27-216ENST00000574304 HSD11B1P28845 292 aa-0.2□□□□□ -2.44
CDC27-216ENST00000574304 MRPS25P82663 173 aaKnown RBP-0.2□□□□□ -2.44
CDC27-216ENST00000574304 FADDQ13158 208 aa-0.2□□□□□ -2.44
CDC27-216ENST00000574304 ZNF56Q15929 161 aa-0.2□□□□□ -2.44
CDC27-216ENST00000574304 SPINK13Q1W4C9 94 aa-0.2□□□□□ -2.44
CDC27-216ENST00000574304 XAF1Q6GPH4 301 aa-0.2□□□□□ -2.44
CDC27-216ENST00000574304 GRPEL2Q8TAA5 225 aa-0.2□□□□□ -2.44
CDC27-216ENST00000574304 LINC00208Q96KT6 92 aa-0.2□□□□□ -2.44
CDC27-216ENST00000574304 OR4C12Q96R67 309 aa-0.2□□□□□ -2.44
CDC27-216ENST00000574304 EFCAB11Q9BUY7 163 aa-0.2□□□□□ -2.44
CDC27-216ENST00000574304 LPAR5Q9H1C0 372 aa-0.2□□□□□ -2.44
CDC27-216ENST00000574304 PIAS1O75925 651 aa-0.21□□□□□ -2.44
CDC27-216ENST00000574304 CST7O76096 145 aa-0.21□□□□□ -2.44
CDC27-216ENST00000574304 IGHV3-30P01768 117 aa-0.21□□□□□ -2.44
CDC27-216ENST00000574304 IGHV3-30-5P0DP03 117 aa-0.21□□□□□ -2.44
CDC27-216ENST00000574304 SNRPD3P62318 126 aaKnown RBP-0.21□□□□□ -2.44
CDC27-216ENST00000574304 POU6F1Q14863 301 aa-0.21□□□□□ -2.44
CDC27-216ENST00000574304 HACD4Q5VWC8 232 aa-0.21□□□□□ -2.44
CDC27-216ENST00000574304 C10orf99Q6UWK7 81 aa-0.21□□□□□ -2.44
CDC27-216ENST00000574304 LYRM2Q9NU23 88 aaPredicted RBP-0.21□□□□□ -2.44
CDC27-216ENST00000574304 FRMPD1Q5SYB0 1578 aa-0.21□□□□□ -2.44
CDC27-216ENST00000574304 MYH2Q9UKX2 1941 aa-0.22□□□□□ -2.44
CDC27-216ENST00000574304 TRPM1Q7Z4N2 1603 aa-0.22□□□□□ -2.44
CDC27-216ENST00000574304 C3orf85A0A1B0GTC6 90 aa-0.22□□□□□ -2.44
CDC27-216ENST00000574304 RPL35P42766 123 aaKnown RBP-0.22□□□□□ -2.44
CDC27-216ENST00000574304 TMED2Q15363 201 aa-0.22□□□□□ -2.44
CDC27-216ENST00000574304 PLEKHB2Q96CS7 222 aa-0.22□□□□□ -2.44
CDC27-216ENST00000574304 SH3BGRL3Q9H299 93 aa-0.22□□□□□ -2.44
CDC27-216ENST00000574304 DSPPQ9NZW4 1301 aa-0.22□□□□□ -2.44
CDC27-216ENST00000574304 TTC28Q96AY4 2481 aa-0.22□□□□□ -2.44
CDC27-216ENST00000574304 CELSR1Q9NYQ6 3014 aa-0.23□□□□□ -2.45
CDC27-216ENST00000574304 A6NN06 94 aa-0.23□□□□□ -2.45
CDC27-216ENST00000574304 SPINK1P00995 79 aa-0.23□□□□□ -2.45
CDC27-216ENST00000574304 FABP4P15090 132 aa-0.23□□□□□ -2.45
CDC27-216ENST00000574304 CAPZBP47756 277 aa-0.23□□□□□ -2.45
CDC27-216ENST00000574304 RPL37P61927 97 aaKnown RBP-0.23□□□□□ -2.45
CDC27-216ENST00000574304 RTL8BQ17RB0 113 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms