RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 QRFPP83859 136 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 PDE6HQ13956 83 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 CIRBPQ14011 172 aaKnown RBP1.03□□□□□ -2.24
CHD3-217ENST00000574022 C2orf82Q6UX34 121 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 ARPINQ7Z6K5 226 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 RPS19BP1Q86WX3 136 aaKnown RBP1.03□□□□□ -2.24
CHD3-217ENST00000574022 CTAGE3PQ8IX95 158 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 CLECL1Q8IZS7 167 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 OR5AK2Q8NH90 309 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 CCL4L1Q8NHW4 92 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 C1orf54Q8WWF1 131 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 GGACTQ9BVM4 153 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 LPAR5Q9H1C0 372 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 FKBP11Q9NYL4 201 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 ERG28Q9UKR5 140 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 TNFSF18Q9UNG2 199 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 KDM6AO15550 1401 aaPredicted RBP1.03□□□□□ -2.24
CHD3-217ENST00000574022 SYNJ1O43426 1573 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 PLXNA3P51805 1871 aa1.03□□□□□ -2.25
CHD3-217ENST00000574022 ANAPC1Q9H1A4 1944 aa1.03□□□□□ -2.25
CHD3-217ENST00000574022 TRAV27A0A087WT01 109 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 TRAV10A0A0B4J240 114 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 ZNF727A8MUV8 499 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 C5orf67F2Z3F1 127 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 F8W036 122 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 MGAMO43451 1857 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 PHLPP1O60346 1717 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 ERC2-IT1O76042 136 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 NCR2O95944 276 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 CD2P06729 351 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 TSPAN19P0C672 248 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 IGLC6P0CF74 106 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 HLA-DRB4P13762 266 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 KDELR1P24390 212 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 AKR1D1P51857 326 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 DNAJB13P59910 316 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 KRTAP10-7P60409 375 aaPredicted RBP1.02□□□□□ -2.25
CHD3-217ENST00000574022 KRTAP10-8P60410 259 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 SNRPD3P62318 126 aaKnown RBP1.02□□□□□ -2.25
CHD3-217ENST00000574022 DIAPH2-AS1Q14236 149 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 SPCS2Q15005 226 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 COL24A1Q17RW2 1714 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 FP248Q71RG6 208 aaPredicted RBP1.02□□□□□ -2.25
CHD3-217ENST00000574022 ARL11Q969Q4 196 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 TP53RKQ96S44 253 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 HLA-DRB4X5D2U9 266 aa1.02□□□□□ -2.25
CHD3-217ENST00000574022 CDK5RAP2Q96SN8 1893 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.01□□□□□ -2.25
CHD3-217ENST00000574022 ARHGAP31Q2M1Z3 1444 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 MYOM3Q5VTT5 1437 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 A0A087WSZ3 146 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 PNMA8CA0A1B0GUJ8 204 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 A0A1B0GV90 55 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 C9orf170A2RU37 121 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 NPFFO15130 113 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 GPX1P07203 203 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 LINC00694P0DN24 101 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 SLC25A4P12235 298 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 ETV6P41212 452 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 PCBD1P61457 104 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 COPZ1P61923 177 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 RRAS2P62070 204 aaPredicted RBP1.01□□□□□ -2.25
CHD3-217ENST00000574022 BLCAPP62952 87 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 NEDD8Q15843 81 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 C1orf137Q5JT78 98 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 GLIPR1L1Q6UWM5 242 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 TMEM91Q6ZNR0 172 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 TEN1Q86WV5 123 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 COA5Q86WW8 74 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 OR5AS1Q8N127 324 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 OR10AC1Q8NH08 325 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 OR4C6Q8NH72 309 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 C4orf3Q8WVX3 66 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 NABP2Q9BQ15 211 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 CST11Q9H112 138 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 SLC35B3Q9H1N7 401 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 TMEM106BQ9NUM4 274 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 COMMD3Q9UBI1 195 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 METTL1Q9UBP6 276 aaKnown RBP1.01□□□□□ -2.25
CHD3-217ENST00000574022 SOX21Q9Y651 276 aaPredicted RBP1.01□□□□□ -2.25
CHD3-217ENST00000574022 KIAA2026Q5HYC2 2103 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 FANCMQ8IYD8 2048 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 NALCNQ8IZF0 1738 aa1.01□□□□□ -2.25
CHD3-217ENST00000574022 EIF4G3O43432 1585 aaKnown RBP1□□□□□ -2.25
CHD3-217ENST00000574022 GRIN2AQ12879 1464 aa1□□□□□ -2.25
CHD3-217ENST00000574022 MYH1P12882 1939 aa1□□□□□ -2.25
CHD3-217ENST00000574022 TRBV6-5A0A0K0K1A5 114 aa1□□□□□ -2.25
CHD3-217ENST00000574022 C3orf85A0A1B0GTC6 90 aa1□□□□□ -2.25
CHD3-217ENST00000574022 FAM236AA0A1B0GUQ0 79 aa1□□□□□ -2.25
CHD3-217ENST00000574022 FAM236BA0A1B0GV22 79 aa1□□□□□ -2.25
CHD3-217ENST00000574022 LINC00587B1AMM8 73 aa1□□□□□ -2.25
CHD3-217ENST00000574022 ZNF670-ZNF695F2Z2N8 137 aa1□□□□□ -2.25
CHD3-217ENST00000574022 GNG7O60262 68 aa1□□□□□ -2.25
CHD3-217ENST00000574022 RBP4P02753 201 aa1□□□□□ -2.25
CHD3-217ENST00000574022 CD14P08571 375 aa1□□□□□ -2.25
CHD3-217ENST00000574022 CXCL8P10145 99 aa1□□□□□ -2.25
CHD3-217ENST00000574022 CCL4P13236 92 aa1□□□□□ -2.25
CHD3-217ENST00000574022 CKS2P33552 79 aa1□□□□□ -2.25
CHD3-217ENST00000574022 SELENOWP63302 87 aa1□□□□□ -2.25
CHD3-217ENST00000574022 C10orf55Q5SWW7 151 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms