RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 FAM231CP0DMU5 169 aa7.99□□□□□ -1.13
RPAIN-214ENST00000574003 CT45A10P0DMU9 189 aa7.99□□□□□ -1.13
RPAIN-214ENST00000574003 CXCL2P19875 107 aa7.99□□□□□ -1.13
RPAIN-214ENST00000574003 RPL29P47914 159 aaKnown RBP7.99□□□□□ -1.13
RPAIN-214ENST00000574003 ERCC8Q13216 396 aa7.99□□□□□ -1.13
RPAIN-214ENST00000574003 RAB31Q13636 194 aa7.99□□□□□ -1.13
RPAIN-214ENST00000574003 CLINT1Q14677 625 aa7.99□□□□□ -1.13
RPAIN-214ENST00000574003 LINC00299Q6ZSB3 139 aa7.99□□□□□ -1.13
RPAIN-214ENST00000574003 S100A7AQ86SG5 101 aa7.99□□□□□ -1.13
RPAIN-214ENST00000574003 STX12Q86Y82 276 aa7.99□□□□□ -1.13
RPAIN-214ENST00000574003 OR1L4Q8NGR5 311 aa7.99□□□□□ -1.13
RPAIN-214ENST00000574003 NDUFB4O95168 129 aa7.98□□□□□ -1.13
RPAIN-214ENST00000574003 CDKN1BP46527 198 aa7.98□□□□□ -1.13
RPAIN-214ENST00000574003 H2BFSP57053 126 aa7.98□□□□□ -1.13
RPAIN-214ENST00000574003 HBG1P69891 147 aa7.98□□□□□ -1.13
RPAIN-214ENST00000574003 HBG2P69892 147 aa7.98□□□□□ -1.13
RPAIN-214ENST00000574003 OXA1LQ15070 435 aa7.98□□□□□ -1.13
RPAIN-214ENST00000574003 GFI1BQ5VTD9 330 aa7.98□□□□□ -1.13
RPAIN-214ENST00000574003 MIR17HGQ75NE6 70 aa7.98□□□□□ -1.13
RPAIN-214ENST00000574003 UBE2DNLQ8IWF7 75 aa7.98□□□□□ -1.13
RPAIN-214ENST00000574003 OR5C1Q8NGR4 320 aa7.98□□□□□ -1.13
RPAIN-214ENST00000574003 OR10J6PQ8NGY7 276 aa7.98□□□□□ -1.13
RPAIN-214ENST00000574003 BLNKQ8WV28 456 aa7.98□□□□□ -1.13
RPAIN-214ENST00000574003 NPCDR1Q9BY65 106 aa7.98□□□□□ -1.13
RPAIN-214ENST00000574003 NOP10Q9NPE3 64 aaKnown RBP7.98□□□□□ -1.13
RPAIN-214ENST00000574003 PTTG2Q9NZH5 202 aa7.98□□□□□ -1.13
RPAIN-214ENST00000574003 F5H768 121 aa7.97□□□□□ -1.13
RPAIN-214ENST00000574003 EIF3GO75821 320 aaKnown RBP eCLIP7.97□□□□□ -1.13
RPAIN-214ENST00000574003 TAS2R60P59551 318 aa7.97□□□□□ -1.13
RPAIN-214ENST00000574003 EXOC3-AS1Q8N2X6 119 aa7.97□□□□□ -1.13
RPAIN-214ENST00000574003 PFDN5Q99471 154 aa7.97□□□□□ -1.13
RPAIN-214ENST00000574003 SLC25A2Q9BXI2 301 aa7.97□□□□□ -1.13
RPAIN-214ENST00000574003 RNF24Q9Y225 148 aa7.97□□□□□ -1.13
RPAIN-214ENST00000574003 HERC2O95714 4834 aa7.97□□□□□ -1.13
RPAIN-214ENST00000574003 TRBV19A0A075B6N1 114 aa7.96□□□□□ -1.14
RPAIN-214ENST00000574003 TRAV12-3A0A0B4J271 114 aa7.96□□□□□ -1.14
RPAIN-214ENST00000574003 LYRM9A8MSI8 78 aa7.96□□□□□ -1.14
RPAIN-214ENST00000574003 RTL8CO15255 209 aa7.96□□□□□ -1.14
RPAIN-214ENST00000574003 TSPOP30536 169 aa7.96□□□□□ -1.14
RPAIN-214ENST00000574003 ATP6V1FQ16864 119 aa7.96□□□□□ -1.14
RPAIN-214ENST00000574003 RNASE8Q8TDE3 154 aaKnown RBP7.96□□□□□ -1.14
RPAIN-214ENST00000574003 FAM167A-AS1Q96KT0 104 aa7.96□□□□□ -1.14
RPAIN-214ENST00000574003 NMES1Q9C002 83 aa7.96□□□□□ -1.14
RPAIN-214ENST00000574003 PKHD1P08F94 4074 aa7.96□□□□□ -1.14
RPAIN-214ENST00000574003 IGKV2-40A0A087WW87 121 aaPredicted RBP7.95□□□□□ -1.14
RPAIN-214ENST00000574003 E5RGE8 158 aa7.95□□□□□ -1.14
RPAIN-214ENST00000574003 NPIPB6E9PJ23 425 aa7.95□□□□□ -1.14
RPAIN-214ENST00000574003 IGKV2D-40P01614 121 aaPredicted RBP7.95□□□□□ -1.14
RPAIN-214ENST00000574003 HIST1H1EP10412 219 aaKnown RBP7.95□□□□□ -1.14
RPAIN-214ENST00000574003 Q6ZQT7 251 aa7.95□□□□□ -1.14
RPAIN-214ENST00000574003 TMEM256Q8N2U0 113 aa7.95□□□□□ -1.14
RPAIN-214ENST00000574003 CHAC2Q8WUX2 184 aa7.95□□□□□ -1.14
RPAIN-214ENST00000574003 PPP1R1CQ8WVI7 109 aa7.95□□□□□ -1.14
RPAIN-214ENST00000574003 FAM210BQ96KR6 192 aa7.95□□□□□ -1.14
RPAIN-214ENST00000574003 MARVELD1Q9BSK0 173 aa7.95□□□□□ -1.14
RPAIN-214ENST00000574003 SMIM3Q9BZL3 60 aa7.95□□□□□ -1.14
RPAIN-214ENST00000574003 SLC25A31Q9H0C2 315 aa7.95□□□□□ -1.14
RPAIN-214ENST00000574003 TMEM14CQ9P0S9 112 aa7.95□□□□□ -1.14
RPAIN-214ENST00000574003 TIMM9Q9Y5J7 89 aa7.95□□□□□ -1.14
RPAIN-214ENST00000574003 H7BYZ3 331 aa7.94□□□□□ -1.14
RPAIN-214ENST00000574003 SSNA1O43805 119 aa7.94□□□□□ -1.14
RPAIN-214ENST00000574003 PRAF2O60831 178 aa7.94□□□□□ -1.14
RPAIN-214ENST00000574003 NUDT3O95989 172 aa7.94□□□□□ -1.14
RPAIN-214ENST00000574003 RLN2P04090 185 aa7.94□□□□□ -1.14
RPAIN-214ENST00000574003 OR10J4P0C629 311 aa7.94□□□□□ -1.14
RPAIN-214ENST00000574003 CD300CQ08708 224 aa7.94□□□□□ -1.14
RPAIN-214ENST00000574003 BTN1A1Q13410 526 aa7.94□□□□□ -1.14
RPAIN-214ENST00000574003 ICAM4Q14773 271 aa7.94□□□□□ -1.14
RPAIN-214ENST00000574003 GUK1Q16774 197 aa7.94□□□□□ -1.14
RPAIN-214ENST00000574003 FAM122CQ6P4D5 195 aa7.94□□□□□ -1.14
RPAIN-214ENST00000574003 TMEM263Q8WUH6 116 aaKnown RBP7.94□□□□□ -1.14
RPAIN-214ENST00000574003 C16orf74Q96GX8 76 aa7.94□□□□□ -1.14
RPAIN-214ENST00000574003 WDR61Q9GZS3 305 aaKnown RBP7.94□□□□□ -1.14
RPAIN-214ENST00000574003 AGPAT4-IT1Q9H0P7 198 aa7.94□□□□□ -1.14
RPAIN-214ENST00000574003 TIMM8BQ9Y5J9 83 aaPredicted RBP7.94□□□□□ -1.14
RPAIN-214ENST00000574003 DYNC1H1Q14204 4646 aaKnown RBP7.94□□□□□ -1.14
RPAIN-214ENST00000574003 A0A1B0GVY2 172 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 GAGE12BA1L429 117 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 CBY3A6NI87 242 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 MPDU1O75352 247 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 GAGE7O76087 117 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 MPC2O95563 127 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 ATP5G1P05496 136 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 GAGE12FP0CL80 117 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 GAGE12GP0CL81 117 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 GAGE12IP0CL82 117 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 LEPP41159 167 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 ATP5G3P48201 142 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 PRR9Q5T870 116 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 Q6ZR54 194 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 RNF141Q8WVD5 230 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 PHYHIPLQ96FC7 376 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 VGLL1Q99990 258 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 WFDC1Q9HC57 220 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 MUC4Q99102 2169 aa7.93□□□□□ -1.14
RPAIN-214ENST00000574003 PRSS29PA6NIE9 313 aa7.92□□□□□ -1.14
RPAIN-214ENST00000574003 ZNF253O75346 499 aa7.92□□□□□ -1.14
RPAIN-214ENST00000574003 RNASE4P34096 147 aaKnown RBP7.92□□□□□ -1.14
RPAIN-214ENST00000574003 OR5I1Q13606 314 aa7.92□□□□□ -1.14
RPAIN-214ENST00000574003 LGALS9BQ3B8N2 356 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 222 ms