RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 DPM3Q9P2X0 92 aa14.93□□□□□ -0.02
SCARF1-206ENST00000573852 IGKV2-40A0A087WW87 121 aaPredicted RBP14.92□□□□□ -0.02
SCARF1-206ENST00000573852 CD5LO43866 347 aa14.92□□□□□ -0.02
SCARF1-206ENST00000573852 IGKV2D-40P01614 121 aaPredicted RBP14.92□□□□□ -0.02
SCARF1-206ENST00000573852 FXYD7P58549 80 aa14.92□□□□□ -0.02
SCARF1-206ENST00000573852 ZNF672Q499Z4 452 aaPredicted RBP14.92□□□□□ -0.02
SCARF1-206ENST00000573852 NDUFA3O95167 84 aa14.92□□□□□ -0.02
SCARF1-206ENST00000573852 KLRD1Q13241 179 aa14.92□□□□□ -0.02
SCARF1-206ENST00000573852 NPBQ8NG41 125 aa14.92□□□□□ -0.02
SCARF1-206ENST00000573852 SPTBN2O15020 2390 aa14.92□□□□□ -0.02
SCARF1-206ENST00000573852 LY6HO94772 140 aa14.91□□□□□ -0.02
SCARF1-206ENST00000573852 ABCA4P78363 2273 aa14.91□□□□□ -0.02
SCARF1-206ENST00000573852 IGLV11-55A0A075B6I3 123 aa14.91□□□□□ -0.02
SCARF1-206ENST00000573852 MFAP4P55083 255 aa14.91□□□□□ -0.02
SCARF1-206ENST00000573852 PSG9Q00887 426 aa14.9□□□□□ -0.02
SCARF1-206ENST00000573852 HES1Q14469 280 aa14.9□□□□□ -0.02
SCARF1-206ENST00000573852 MRPL51Q4U2R6 128 aaKnown RBP14.9□□□□□ -0.02
SCARF1-206ENST00000573852 IGHV3-23P01764 117 aa14.9□□□□□ -0.02
SCARF1-206ENST00000573852 FGF6P10767 208 aa14.9□□□□□ -0.02
SCARF1-206ENST00000573852 C5orf64Q2M2E5 130 aa14.9□□□□□ -0.02
SCARF1-206ENST00000573852 ORMDL3Q8N138 153 aa14.9□□□□□ -0.02
SCARF1-206ENST00000573852 OR11H6Q8NGC7 330 aa14.9□□□□□ -0.02
SCARF1-206ENST00000573852 TRAV8-6A0A0B4J262 113 aa14.89□□□□□ -0.03
SCARF1-206ENST00000573852 EGR2P11161 476 aaPredicted RBP14.89□□□□□ -0.03
SCARF1-206ENST00000573852 NDPQ00604 133 aa14.89□□□□□ -0.03
SCARF1-206ENST00000573852 SMKR1H3BMG3 65 aa14.89□□□□□ -0.03
SCARF1-206ENST00000573852 GRNP28799 593 aaKnown RBP14.89□□□□□ -0.03
SCARF1-206ENST00000573852 IGFL4Q6B9Z1 124 aa14.89□□□□□ -0.03
SCARF1-206ENST00000573852 PRR25Q96S07 402 aa14.89□□□□□ -0.03
SCARF1-206ENST00000573852 ZNF80P51504 273 aaPredicted RBP14.88□□□□□ -0.03
SCARF1-206ENST00000573852 PAX8Q06710 450 aa14.88□□□□□ -0.03
SCARF1-206ENST00000573852 Q8TAT8 98 aa14.88□□□□□ -0.03
SCARF1-206ENST00000573852 NPIPB5A8MRT5 1133 aa14.88□□□□□ -0.03
SCARF1-206ENST00000573852 NHLH1Q02575 133 aa14.88□□□□□ -0.03
SCARF1-206ENST00000573852 TMEM97Q5BJF2 176 aa14.88□□□□□ -0.03
SCARF1-206ENST00000573852 S100A7AQ86SG5 101 aa14.88□□□□□ -0.03
SCARF1-206ENST00000573852 TLN1Q9Y490 2541 aaKnown RBP14.87□□□□□ -0.03
SCARF1-206ENST00000573852 TCTAP57738 103 aa14.87□□□□□ -0.03
SCARF1-206ENST00000573852 CACNG7P62955 275 aa14.87□□□□□ -0.03
SCARF1-206ENST00000573852 COX8CQ7Z4L0 72 aa14.87□□□□□ -0.03
SCARF1-206ENST00000573852 ZNF575Q86XF7 245 aa14.87□□□□□ -0.03
SCARF1-206ENST00000573852 ZNF48Q96MX3 618 aaPredicted RBP14.87□□□□□ -0.03
SCARF1-206ENST00000573852 VGLL1Q99990 258 aa14.87□□□□□ -0.03
SCARF1-206ENST00000573852 C21orf62Q9NYP8 219 aa14.87□□□□□ -0.03
SCARF1-206ENST00000573852 ANKHD1Q8IWZ3 2542 aaKnown RBP14.87□□□□□ -0.03
SCARF1-206ENST00000573852 LGALS9BQ3B8N2 356 aa14.87□□□□□ -0.03
SCARF1-206ENST00000573852 LGALS9CQ6DKI2 356 aa14.87□□□□□ -0.03
SCARF1-206ENST00000573852 ARPC1AQ92747 370 aa14.87□□□□□ -0.03
SCARF1-206ENST00000573852 SMAD5-AS1Q9Y6J3 95 aa14.87□□□□□ -0.03
SCARF1-206ENST00000573852 RELNP78509 3460 aa14.86□□□□□ -0.03
SCARF1-206ENST00000573852 NPYP01303 97 aa14.86□□□□□ -0.03
SCARF1-206ENST00000573852 HLA-DMBP28068 263 aa14.86□□□□□ -0.03
SCARF1-206ENST00000573852 CEACAM3P40198 252 aa14.86□□□□□ -0.03
SCARF1-206ENST00000573852 RPS20P60866 119 aaKnown RBP14.86□□□□□ -0.03
SCARF1-206ENST00000573852 DPF1Q92782 380 aa14.86□□□□□ -0.03
SCARF1-206ENST00000573852 C7orf71A4D174 169 aa14.86□□□□□ -0.03
SCARF1-206ENST00000573852 IGHG4P01861 327 aa14.86□□□□□ -0.03
SCARF1-206ENST00000573852 TWIST1Q15672 202 aa14.86□□□□□ -0.03
SCARF1-206ENST00000573852 ZNF562Q6V9R5 426 aa14.86□□□□□ -0.03
SCARF1-206ENST00000573852 VKORC1Q9BQB6 163 aa14.86□□□□□ -0.03
SCARF1-206ENST00000573852 CST9LQ9H4G1 147 aa14.86□□□□□ -0.03
SCARF1-206ENST00000573852 RABAC1Q9UI14 185 aa14.86□□□□□ -0.03
SCARF1-206ENST00000573852 ODF3BA8MYP8 253 aa14.85□□□□□ -0.03
SCARF1-206ENST00000573852 CKS2P33552 79 aa14.85□□□□□ -0.03
SCARF1-206ENST00000573852 TTC9CQ8N5M4 171 aa14.85□□□□□ -0.03
SCARF1-206ENST00000573852 HBDP02042 147 aa14.85□□□□□ -0.03
SCARF1-206ENST00000573852 RPL7P18124 248 aaKnown RBP14.85□□□□□ -0.03
SCARF1-206ENST00000573852 S100A7P31151 101 aa14.85□□□□□ -0.03
SCARF1-206ENST00000573852 DYNAPQ8N1N2 210 aa14.85□□□□□ -0.03
SCARF1-206ENST00000573852 FER1L6-AS1Q8NA97 138 aa14.85□□□□□ -0.03
SCARF1-206ENST00000573852 FAM90A27PA6NNH2 459 aa14.84□□□□□ -0.03
SCARF1-206ENST00000573852 UQCRFS1P47985 274 aa14.84□□□□□ -0.03
SCARF1-206ENST00000573852 PEF1Q9UBV8 284 aaKnown RBP14.84□□□□□ -0.03
SCARF1-206ENST00000573852 IGHV3OR16-8A0A075B7F1 116 aa14.84□□□□□ -0.03
SCARF1-206ENST00000573852 NCBP2LA6PVI3 153 aaKnown RBP14.84□□□□□ -0.03
SCARF1-206ENST00000573852 MSRB1Q9NZV6 116 aa14.84□□□□□ -0.03
SCARF1-206ENST00000573852 CTSGP08311 255 aa14.83□□□□□ -0.03
SCARF1-206ENST00000573852 IGLC6P0CF74 106 aa14.83□□□□□ -0.03
SCARF1-206ENST00000573852 SEC11AP67812 179 aa14.83□□□□□ -0.03
SCARF1-206ENST00000573852 BOD1L2Q8IYS8 172 aa14.83□□□□□ -0.03
SCARF1-206ENST00000573852 OR1N2Q8NGR9 330 aa14.83□□□□□ -0.03
SCARF1-206ENST00000573852 VPS25Q9BRG1 176 aa14.83□□□□□ -0.03
SCARF1-206ENST00000573852 TCF15Q12870 199 aa14.82□□□□□ -0.04
SCARF1-206ENST00000573852 WFDC3Q8IUB2 231 aa14.82□□□□□ -0.04
SCARF1-206ENST00000573852 IFI27L1Q96BM0 104 aa14.82□□□□□ -0.04
SCARF1-206ENST00000573852 IGHV3-35A0A0C4DH35 117 aa14.82□□□□□ -0.04
SCARF1-206ENST00000573852 PRTN3P24158 256 aa14.82□□□□□ -0.04
SCARF1-206ENST00000573852 OCIAD2Q56VL3 154 aa14.82□□□□□ -0.04
SCARF1-206ENST00000573852 PSMG3-AS1Q96PY0 264 aa14.81□□□□□ -0.04
SCARF1-206ENST00000573852 THYN1Q9P016 225 aa14.81□□□□□ -0.04
SCARF1-206ENST00000573852 NDUFS7O75251 213 aa14.81□□□□□ -0.04
SCARF1-206ENST00000573852 GAS8-AS1O95177 125 aa14.81□□□□□ -0.04
SCARF1-206ENST00000573852 BMI1P35226 326 aa14.81□□□□□ -0.04
SCARF1-206ENST00000573852 M0R1W7 72 aa14.8□□□□□ -0.04
SCARF1-206ENST00000573852 SMAD7O15105 426 aaKnown RBP14.8□□□□□ -0.04
SCARF1-206ENST00000573852 RNF185Q96GF1 192 aa14.8□□□□□ -0.04
SCARF1-206ENST00000573852 GAGE12BA1L429 117 aa14.8□□□□□ -0.04
SCARF1-206ENST00000573852 PRSS57Q6UWY2 283 aa14.8□□□□□ -0.04
SCARF1-206ENST00000573852 DKK2Q9UBU2 259 aa14.8□□□□□ -0.04
SCARF1-206ENST00000573852 WNK2Q9Y3S1 2297 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms