RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 ZNF479Q96JC4 524 aa7.69□□□□□ -1.18
USP6-204ENST00000572949 ADMP35318 185 aa7.69□□□□□ -1.18
USP6-204ENST00000572949 GAFA1Q96PS6 74 aa7.69□□□□□ -1.18
USP6-204ENST00000572949 COL24A1Q17RW2 1714 aa7.69□□□□□ -1.18
USP6-204ENST00000572949 SOCS3O14543 225 aa7.69□□□□□ -1.18
USP6-204ENST00000572949 IGKV1-39P01597 117 aa7.69□□□□□ -1.18
USP6-204ENST00000572949 IGKV1D-39P04432 117 aa7.69□□□□□ -1.18
USP6-204ENST00000572949 CSRP3P50461 194 aa7.69□□□□□ -1.18
USP6-204ENST00000572949 WDR90Q96KV7 1748 aa7.69□□□□□ -1.18
USP6-204ENST00000572949 RTBDNQ9BSG5 229 aaPredicted RBP7.68□□□□□ -1.18
USP6-204ENST00000572949 SORL1Q92673 2214 aa7.68□□□□□ -1.18
USP6-204ENST00000572949 MST1P26927 711 aa7.68□□□□□ -1.18
USP6-204ENST00000572949 NDUFAF3Q9BU61 184 aa7.68□□□□□ -1.18
USP6-204ENST00000572949 ZNF319Q9P2F9 582 aa7.68□□□□□ -1.18
USP6-204ENST00000572949 A0A1B0GUS0 222 aa7.68□□□□□ -1.18
USP6-204ENST00000572949 F8W735 103 aaPredicted RBP7.68□□□□□ -1.18
USP6-204ENST00000572949 DEFB113Q30KQ7 82 aa7.68□□□□□ -1.18
USP6-204ENST00000572949 I3L3M4 83 aa7.68□□□□□ -1.18
USP6-204ENST00000572949 SERF1AO75920 110 aa7.68□□□□□ -1.18
USP6-204ENST00000572949 GGNQ86UU5 652 aa7.68□□□□□ -1.18
USP6-204ENST00000572949 SAMD5Q5TGI4 173 aa7.68□□□□□ -1.18
USP6-204ENST00000572949 CD177Q8N6Q3 437 aa7.68□□□□□ -1.18
USP6-204ENST00000572949 COX11Q9Y6N1 276 aa7.68□□□□□ -1.18
USP6-204ENST00000572949 NMBP08949 121 aa7.68□□□□□ -1.18
USP6-204ENST00000572949 FGFBP3Q8TAT2 258 aa7.68□□□□□ -1.18
USP6-204ENST00000572949 C18orf12Q96KH6 178 aa7.68□□□□□ -1.18
USP6-204ENST00000572949 SRSF8Q9BRL6 282 aaKnown RBP7.68□□□□□ -1.18
USP6-204ENST00000572949 NYNRINQ9P2P1 1898 aaKnown RBP7.68□□□□□ -1.18
USP6-204ENST00000572949 GNB1LQ9BYB4 327 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 THSD7AQ9UPZ6 1657 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 LRRC37AA6NMS7 1700 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 IGLV3-32A0A0A0MS00 114 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 PRB1P04280 392 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 CDKN1BP46527 198 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 PIFOQ8TCI5 191 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 VWCEQ96DN2 955 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 TRAV12-2A0A075B6T6 113 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 PAQR4Q8N4S7 273 aaPredicted RBP7.67□□□□□ -1.18
USP6-204ENST00000572949 RPP25LQ8N5L8 163 aaKnown RBP7.67□□□□□ -1.18
USP6-204ENST00000572949 IGHV3-38A0A0C4DH36 116 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 PFN1P07737 140 aaKnown RBP7.67□□□□□ -1.18
USP6-204ENST00000572949 IGKV1D-12P01611 117 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 UBE2AP49459 152 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 LYZL4Q96KX0 146 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 FANCD2OSQ96PS1 177 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 DMRT1Q9Y5R6 373 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 HAMPP81172 84 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 LYPD1Q8N2G4 141 aa7.67□□□□□ -1.18
USP6-204ENST00000572949 ETDCA0A1B0GVM5 59 aa7.66□□□□□ -1.18
USP6-204ENST00000572949 GAGE2BQ13066 116 aa7.66□□□□□ -1.18
USP6-204ENST00000572949 EGR2P11161 476 aaPredicted RBP7.66□□□□□ -1.18
USP6-204ENST00000572949 ID3Q02535 119 aa7.66□□□□□ -1.18
USP6-204ENST00000572949 NOP10Q9NPE3 64 aaKnown RBP7.66□□□□□ -1.18
USP6-204ENST00000572949 ARMS2P0C7Q2 107 aa7.66□□□□□ -1.18
USP6-204ENST00000572949 OCC1Q8TAD7 63 aa7.66□□□□□ -1.18
USP6-204ENST00000572949 SONP18583 2426 aaKnown RBP7.66□□□□□ -1.18
USP6-204ENST00000572949 SRP19P09132 144 aaKnown RBP7.66□□□□□ -1.18
USP6-204ENST00000572949 CFHR2P36980 270 aa7.66□□□□□ -1.18
USP6-204ENST00000572949 ZFAND6Q6FIF0 208 aa7.66□□□□□ -1.18
USP6-204ENST00000572949 UBL5Q9BZL1 73 aa7.66□□□□□ -1.18
USP6-204ENST00000572949 IGHV1OR15-1A0A075B7D0 117 aa7.66□□□□□ -1.18
USP6-204ENST00000572949 GP9P14770 177 aa7.66□□□□□ -1.18
USP6-204ENST00000572949 MED12LQ86YW9 2145 aa7.66□□□□□ -1.18
USP6-204ENST00000572949 Q8NFD4 153 aa7.66□□□□□ -1.18
USP6-204ENST00000572949 ANAPC1Q9H1A4 1944 aa7.66□□□□□ -1.18
USP6-204ENST00000572949 XCL1P47992 114 aa7.65□□□□□ -1.18
USP6-204ENST00000572949 Q6ZQT7 251 aa7.65□□□□□ -1.18
USP6-204ENST00000572949 TM2D2Q9BX73 214 aa7.65□□□□□ -1.18
USP6-204ENST00000572949 C2orf16Q68DN1 1984 aa7.65□□□□□ -1.18
USP6-204ENST00000572949 IGHV1-24A0A0C4DH33 117 aa7.65□□□□□ -1.18
USP6-204ENST00000572949 A0A1B0GTI1 187 aa7.65□□□□□ -1.18
USP6-204ENST00000572949 SPART-AS1P0CW21 52 aa7.65□□□□□ -1.18
USP6-204ENST00000572949 IGFBP3P17936 291 aaPredicted RBP7.65□□□□□ -1.18
USP6-204ENST00000572949 HSD52Q0P140 79 aa7.65□□□□□ -1.18
USP6-204ENST00000572949 SPATA31B1PQ5VZV4 182 aa7.65□□□□□ -1.18
USP6-204ENST00000572949 FRMPD3Q5JV73 1810 aa7.65□□□□□ -1.18
USP6-204ENST00000572949 WISP3O95389 354 aaPredicted RBP7.65□□□□□ -1.19
USP6-204ENST00000572949 TMEM14BQ9NUH8 114 aa7.65□□□□□ -1.19
USP6-204ENST00000572949 FOXG1P55316 489 aaPredicted RBP7.65□□□□□ -1.19
USP6-204ENST00000572949 VPREB3Q9UKI3 123 aa7.65□□□□□ -1.19
USP6-204ENST00000572949 G3V318 75 aa7.65□□□□□ -1.19
USP6-204ENST00000572949 HLA-DRB4P13762 266 aa7.65□□□□□ -1.19
USP6-204ENST00000572949 C1QL4Q86Z23 238 aa7.65□□□□□ -1.19
USP6-204ENST00000572949 RNF183Q96D59 192 aa7.65□□□□□ -1.19
USP6-204ENST00000572949 MRPL27Q9P0M9 148 aaKnown RBP7.65□□□□□ -1.19
USP6-204ENST00000572949 HLA-DRB4X5D2U9 266 aa7.65□□□□□ -1.19
USP6-204ENST00000572949 RHOHQ15669 191 aa7.64□□□□□ -1.19
USP6-204ENST00000572949 TREML4Q6UXN2 200 aa7.64□□□□□ -1.19
USP6-204ENST00000572949 MUC4Q99102 2169 aa7.64□□□□□ -1.19
USP6-204ENST00000572949 ICOSQ9Y6W8 199 aa7.64□□□□□ -1.19
USP6-204ENST00000572949 FNDC1Q4ZHG4 1894 aaPredicted RBP7.64□□□□□ -1.19
USP6-204ENST00000572949 FBLN5Q9UBX5 448 aa7.64□□□□□ -1.19
USP6-204ENST00000572949 NDUFB1O75438 58 aa7.64□□□□□ -1.19
USP6-204ENST00000572949 TRAV12-1A0A0B4J245 112 aa7.64□□□□□ -1.19
USP6-204ENST00000572949 NDUFB8O95169 186 aa7.64□□□□□ -1.19
USP6-204ENST00000572949 TMEM170AQ8WVE7 144 aa7.64□□□□□ -1.19
USP6-204ENST00000572949 VWA8A3KMH1 1905 aa7.63□□□□□ -1.19
USP6-204ENST00000572949 SMKR1H3BMG3 65 aa7.63□□□□□ -1.19
USP6-204ENST00000572949 ELANEP08246 267 aa7.63□□□□□ -1.19
USP6-204ENST00000572949 IFITM3Q01628 133 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms