RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 CXCL1P09341 107 aa7.28□□□□□ -1.24
CHMP6-203ENST00000572525 F2RP25116 425 aa7.28□□□□□ -1.24
CHMP6-203ENST00000572525 NPY1RP25929 384 aa7.28□□□□□ -1.24
CHMP6-203ENST00000572525 GNRHRP30968 328 aa7.28□□□□□ -1.24
CHMP6-203ENST00000572525 FXYD4P59646 89 aa7.28□□□□□ -1.24
CHMP6-203ENST00000572525 RAB11AP62491 216 aa7.28□□□□□ -1.24
CHMP6-203ENST00000572525 RPL8P62917 257 aaKnown RBP7.28□□□□□ -1.24
CHMP6-203ENST00000572525 PAFAH1B2P68402 229 aa7.28□□□□□ -1.24
CHMP6-203ENST00000572525 MEF2BQ02080 365 aaPredicted RBP7.28□□□□□ -1.24
CHMP6-203ENST00000572525 GAGE1Q13065 139 aa7.28□□□□□ -1.24
CHMP6-203ENST00000572525 C12orf74Q32Q52 190 aa7.28□□□□□ -1.24
CHMP6-203ENST00000572525 SP6Q3SY56 376 aa7.28□□□□□ -1.24
CHMP6-203ENST00000572525 COX19Q49B96 90 aa7.28□□□□□ -1.24
CHMP6-203ENST00000572525 PHLDA2Q53GA4 152 aa7.28□□□□□ -1.24
CHMP6-203ENST00000572525 FRZBQ92765 325 aa7.28□□□□□ -1.24
CHMP6-203ENST00000572525 CIB3Q96Q77 187 aaPredicted RBP7.28□□□□□ -1.24
CHMP6-203ENST00000572525 TP53RKQ96S44 253 aa7.28□□□□□ -1.24
CHMP6-203ENST00000572525 RNF2Q99496 336 aa7.28□□□□□ -1.24
CHMP6-203ENST00000572525 BET1LQ9NYM9 111 aa7.28□□□□□ -1.24
CHMP6-203ENST00000572525 RBM7Q9Y580 266 aaKnown RBP7.28□□□□□ -1.24
CHMP6-203ENST00000572525 FLG2Q5D862 2391 aaPredicted RBP7.28□□□□□ -1.24
CHMP6-203ENST00000572525 IGLV2-18A0A075B6J9 118 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 TGIF2-C20orf24A0A0A6YYL0 155 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 IGHV7-4-1A0A0J9YVY3 117 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 IGLC7A0M8Q6 106 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 H7BYZ3 331 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 M0R143 59 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 CHEK1O14757 476 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 SYNGR2O43760 224 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 PFN1P07737 140 aaKnown RBP7.27□□□□□ -1.25
CHMP6-203ENST00000572525 GIG44P09565 113 aaPredicted RBP7.27□□□□□ -1.25
CHMP6-203ENST00000572525 ERVFC1-1P60608 527 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 NUTF2P61970 127 aaKnown RBP7.27□□□□□ -1.25
CHMP6-203ENST00000572525 RELQ04864 619 aaPredicted RBP7.27□□□□□ -1.25
CHMP6-203ENST00000572525 GAMTQ14353 236 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 BSXQ3C1V8 233 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 UBE2DNLQ8IWF7 75 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 OR51G1Q8NGK1 321 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 NEU1Q99519 415 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 HSD17B10Q99714 261 aaKnown RBP7.27□□□□□ -1.25
CHMP6-203ENST00000572525 RHPN1-AS1Q9BWJ2 59 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 GNG13Q9P2W3 67 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 CBY1Q9Y3M2 126 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 OR2W1Q9Y3N9 320 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 FAT1Q14517 4588 aa7.27□□□□□ -1.25
CHMP6-203ENST00000572525 VPS13BQ7Z7G8 4022 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 CTXND1A0A1B0GTU2 59 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 CGB1A6NKQ9 187 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 C17orf112F2Z3M2 114 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 TCAPO15273 167 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 GZMBP10144 247 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 OR10J1P30954 320 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 CCL20P78556 96 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 TNP2Q05952 138 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 TRPT1Q86TN4 253 aaKnown RBP7.26□□□□□ -1.25
CHMP6-203ENST00000572525 STHQ8IWL8 128 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 OR4X1Q8NH49 305 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 SMIM7Q9BQ49 75 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 CHRDL1Q9BU40 450 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 KCNIP2Q9NS61 270 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 TMEM14BQ9NUH8 114 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 SLC39A9Q9NUM3 307 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 CELA1Q9UNI1 258 aa7.26□□□□□ -1.25
CHMP6-203ENST00000572525 XKRY2A2RUG3 117 aa7.25□□□□□ -1.25
CHMP6-203ENST00000572525 MAP1LC3B2A6NCE7 125 aa7.25□□□□□ -1.25
CHMP6-203ENST00000572525 OR2T8A6NH00 312 aa7.25□□□□□ -1.25
CHMP6-203ENST00000572525 F6UZH7 168 aa7.25□□□□□ -1.25
CHMP6-203ENST00000572525 MPDU1O75352 247 aa7.25□□□□□ -1.25
CHMP6-203ENST00000572525 PGLYRP1O75594 196 aaPredicted RBP7.25□□□□□ -1.25
CHMP6-203ENST00000572525 LINC00614P0C842 121 aa7.25□□□□□ -1.25
CHMP6-203ENST00000572525 GALR1P47211 349 aa7.25□□□□□ -1.25
CHMP6-203ENST00000572525 RPP30P78346 268 aaKnown RBP7.25□□□□□ -1.25
CHMP6-203ENST00000572525 USF2Q15853 346 aaPredicted RBP7.25□□□□□ -1.25
CHMP6-203ENST00000572525 ACTL10Q5JWF8 245 aa7.25□□□□□ -1.25
CHMP6-203ENST00000572525 C1orf194Q5T5A4 169 aa7.25□□□□□ -1.25
CHMP6-203ENST00000572525 VKORC1L1Q8N0U8 176 aa7.25□□□□□ -1.25
CHMP6-203ENST00000572525 TMEM116Q8NCL8 245 aa7.25□□□□□ -1.25
CHMP6-203ENST00000572525 CSNK1G2-AS1Q8NCQ2 148 aa7.25□□□□□ -1.25
CHMP6-203ENST00000572525 MAP1LC3BQ9GZQ8 125 aa7.25□□□□□ -1.25
CHMP6-203ENST00000572525 WDR61Q9GZS3 305 aaKnown RBP7.25□□□□□ -1.25
CHMP6-203ENST00000572525 RPRMQ9NS64 109 aa7.25□□□□□ -1.25
CHMP6-203ENST00000572525 C21orf62Q9NYP8 219 aa7.25□□□□□ -1.25
CHMP6-203ENST00000572525 TEX48A0A1B0GUV7 120 aa7.24□□□□□ -1.25
CHMP6-203ENST00000572525 EPM2AB3EWF7 344 aa7.24□□□□□ -1.25
CHMP6-203ENST00000572525 F8W735 103 aaPredicted RBP7.24□□□□□ -1.25
CHMP6-203ENST00000572525 RBFOX2O43251 390 aaKnown RBP eCLIP7.24□□□□□ -1.25
CHMP6-203ENST00000572525 REG1AP05451 166 aa7.24□□□□□ -1.25
CHMP6-203ENST00000572525 PAX9P55771 341 aa7.24□□□□□ -1.25
CHMP6-203ENST00000572525 RPL30P62888 115 aaKnown RBP7.24□□□□□ -1.25
CHMP6-203ENST00000572525 EIF4EBP1Q13541 118 aaPredicted RBP7.24□□□□□ -1.25
CHMP6-203ENST00000572525 POU2AF1Q16633 256 aa7.24□□□□□ -1.25
CHMP6-203ENST00000572525 LILRB2Q8N423 598 aa7.24□□□□□ -1.25
CHMP6-203ENST00000572525 ZNF709Q8N972 641 aa7.24□□□□□ -1.25
CHMP6-203ENST00000572525 GRAMD2BQ96HH9 432 aa7.24□□□□□ -1.25
CHMP6-203ENST00000572525 PSENENQ9NZ42 101 aa7.24□□□□□ -1.25
CHMP6-203ENST00000572525 LY96Q9Y6Y9 160 aa7.24□□□□□ -1.25
CHMP6-203ENST00000572525 URGCP-MRPS24S4R325 110 aa7.24□□□□□ -1.25
CHMP6-203ENST00000572525 ARL2-SNX15V9GYD0 113 aa7.24□□□□□ -1.25
CHMP6-203ENST00000572525 A0A1B0GV90 55 aa7.23□□□□□ -1.25
CHMP6-203ENST00000572525 TMEM189A5PLL7 270 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms