RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 SOX21Q9Y651 276 aaPredicted RBP12.11□□□□□ -0.47
USP43-202ENST00000570475 SH2D1AO60880 128 aa12.1□□□□□ -0.47
USP43-202ENST00000570475 PET117Q6UWS5 81 aa12.1□□□□□ -0.47
USP43-202ENST00000570475 ZNF414Q96IQ9 312 aa12.1□□□□□ -0.47
USP43-202ENST00000570475 SHANK2-AS3Q9BTD1 123 aa12.1□□□□□ -0.47
USP43-202ENST00000570475 ORMDL3Q8N138 153 aa12.1□□□□□ -0.47
USP43-202ENST00000570475 ZNF491Q8N8L2 437 aa12.1□□□□□ -0.47
USP43-202ENST00000570475 MSRB1Q9NZV6 116 aa12.1□□□□□ -0.47
USP43-202ENST00000570475 KLF12Q9Y4X4 402 aa12.1□□□□□ -0.47
USP43-202ENST00000570475 C19orf71A6NCJ1 209 aa12.1□□□□□ -0.47
USP43-202ENST00000570475 CEACAM4O75871 244 aa12.1□□□□□ -0.47
USP43-202ENST00000570475 BVES-AS1Q5T3Y7 98 aa12.1□□□□□ -0.47
USP43-202ENST00000570475 S100A7AQ86SG5 101 aa12.1□□□□□ -0.47
USP43-202ENST00000570475 LINC00311Q8N616 119 aa12.1□□□□□ -0.47
USP43-202ENST00000570475 RNF182Q8N6D2 247 aa12.1□□□□□ -0.47
USP43-202ENST00000570475 SPENQ96T58 3664 aaKnown RBP12.09□□□□□ -0.47
USP43-202ENST00000570475 LOC105371242A0A075B767 164 aa12.09□□□□□ -0.47
USP43-202ENST00000570475 MYCNOSP40205 109 aa12.09□□□□□ -0.47
USP43-202ENST00000570475 SPRY2O43597 315 aa12.09□□□□□ -0.47
USP43-202ENST00000570475 RAB1BQ9H0U4 201 aa12.09□□□□□ -0.47
USP43-202ENST00000570475 ASH1LQ9NR48 2969 aaKnown RBP12.09□□□□□ -0.47
USP43-202ENST00000570475 ZNF492Q9P255 531 aa12.09□□□□□ -0.47
USP43-202ENST00000570475 I3L2K1 104 aa12.08□□□□□ -0.47
USP43-202ENST00000570475 K7EIM0 57 aa12.08□□□□□ -0.47
USP43-202ENST00000570475 FER1L6-AS1Q8NA97 138 aa12.08□□□□□ -0.47
USP43-202ENST00000570475 NEU4Q8WWR8 484 aaPredicted RBP12.08□□□□□ -0.47
USP43-202ENST00000570475 ARPC1AQ92747 370 aa12.08□□□□□ -0.47
USP43-202ENST00000570475 PRSS22Q9GZN4 317 aa12.08□□□□□ -0.47
USP43-202ENST00000570475 C7orf69Q9H7B7 122 aa12.08□□□□□ -0.47
USP43-202ENST00000570475 RPL24P83731 157 aaKnown RBP12.08□□□□□ -0.48
USP43-202ENST00000570475 PSG9Q00887 426 aa12.08□□□□□ -0.48
USP43-202ENST00000570475 VGLL1Q99990 258 aa12.08□□□□□ -0.48
USP43-202ENST00000570475 TTTY13Q9BZ97 58 aa12.08□□□□□ -0.48
USP43-202ENST00000570475 SCGB2A1O75556 95 aa12.08□□□□□ -0.48
USP43-202ENST00000570475 CRYGCP07315 174 aa12.08□□□□□ -0.48
USP43-202ENST00000570475 SIGLEC8Q9NYZ4 499 aa12.08□□□□□ -0.48
USP43-202ENST00000570475 K7EMI3 77 aa12.07□□□□□ -0.48
USP43-202ENST00000570475 FSTL3O95633 263 aa12.07□□□□□ -0.48
USP43-202ENST00000570475 FAM208BQ5VWN6 2430 aa12.07□□□□□ -0.48
USP43-202ENST00000570475 ANKRD39Q53RE8 183 aa12.07□□□□□ -0.48
USP43-202ENST00000570475 HAX1O00165 279 aa12.07□□□□□ -0.48
USP43-202ENST00000570475 IGLV1-47P01700 117 aa12.07□□□□□ -0.48
USP43-202ENST00000570475 RPL7P18124 248 aaKnown RBP12.07□□□□□ -0.48
USP43-202ENST00000570475 TMEM97Q5BJF2 176 aa12.07□□□□□ -0.48
USP43-202ENST00000570475 SIGLEC15Q6ZMC9 328 aa12.07□□□□□ -0.48
USP43-202ENST00000570475 RABAC1Q9UI14 185 aa12.07□□□□□ -0.48
USP43-202ENST00000570475 GATA1P15976 413 aaPredicted RBP12.06□□□□□ -0.48
USP43-202ENST00000570475 ZNF747Q9BV97 191 aa12.06□□□□□ -0.48
USP43-202ENST00000570475 NDUFS7O75251 213 aa12.06□□□□□ -0.48
USP43-202ENST00000570475 DLX6P56179 175 aa12.06□□□□□ -0.48
USP43-202ENST00000570475 RIPPLY3P57055 190 aa12.06□□□□□ -0.48
USP43-202ENST00000570475 IFI27L1Q96BM0 104 aa12.06□□□□□ -0.48
USP43-202ENST00000570475 TMEM160Q9NX00 188 aa12.06□□□□□ -0.48
USP43-202ENST00000570475 A1L4Q6 167 aa12.06□□□□□ -0.48
USP43-202ENST00000570475 CLEC3BP05452 202 aa12.06□□□□□ -0.48
USP43-202ENST00000570475 CRIP1P50238 77 aa12.06□□□□□ -0.48
USP43-202ENST00000570475 RHOGP84095 191 aa12.06□□□□□ -0.48
USP43-202ENST00000570475 HIST1H1AQ02539 215 aaPredicted RBP12.06□□□□□ -0.48
USP43-202ENST00000570475 CT83Q5H943 113 aa12.06□□□□□ -0.48
USP43-202ENST00000570475 CLEC19AQ6UXS0 136 aa12.06□□□□□ -0.48
USP43-202ENST00000570475 TRAV8-6A0A0B4J262 113 aa12.05□□□□□ -0.48
USP43-202ENST00000570475 NPYP01303 97 aa12.05□□□□□ -0.48
USP43-202ENST00000570475 LEPP41159 167 aa12.05□□□□□ -0.48
USP43-202ENST00000570475 C3orf36Q3SXR2 165 aa12.05□□□□□ -0.48
USP43-202ENST00000570475 SMIM15Q7Z3B0 74 aa12.05□□□□□ -0.48
USP43-202ENST00000570475 TAX1BP3O14907 124 aa12.05□□□□□ -0.48
USP43-202ENST00000570475 NDPQ00604 133 aa12.05□□□□□ -0.48
USP43-202ENST00000570475 SCGB2A2Q13296 93 aa12.05□□□□□ -0.48
USP43-202ENST00000570475 FOXE3Q13461 319 aa12.05□□□□□ -0.48
USP43-202ENST00000570475 C5orf64Q2M2E5 130 aa12.05□□□□□ -0.48
USP43-202ENST00000570475 MRPL51Q4U2R6 128 aaKnown RBP12.05□□□□□ -0.48
USP43-202ENST00000570475 PVRIGQ6DKI7 326 aa12.05□□□□□ -0.48
USP43-202ENST00000570475 FAM71F2Q6NXP2 309 aa12.05□□□□□ -0.48
USP43-202ENST00000570475 GFRA4Q9GZZ7 299 aa12.05□□□□□ -0.48
USP43-202ENST00000570475 IGLV2-11P01706 119 aa12.04□□□□□ -0.48
USP43-202ENST00000570475 EGR2P11161 476 aaPredicted RBP12.04□□□□□ -0.48
USP43-202ENST00000570475 MRGPRG-AS1Q2M3A8 158 aa12.04□□□□□ -0.48
USP43-202ENST00000570475 PCP2Q8IVA1 136 aa12.04□□□□□ -0.48
USP43-202ENST00000570475 DKK2Q9UBU2 259 aa12.04□□□□□ -0.48
USP43-202ENST00000570475 PEF1Q9UBV8 284 aaKnown RBP12.04□□□□□ -0.48
USP43-202ENST00000570475 ACACBO00763 2458 aa12.04□□□□□ -0.48
USP43-202ENST00000570475 GAGE12BA1L429 117 aa12.04□□□□□ -0.48
USP43-202ENST00000570475 FAM231BA6NCW3 169 aa12.04□□□□□ -0.48
USP43-202ENST00000570475 H3BRN7 92 aa12.04□□□□□ -0.48
USP43-202ENST00000570475 COTL1Q14019 142 aa12.04□□□□□ -0.48
USP43-202ENST00000570475 FOXC2Q99958 501 aa12.04□□□□□ -0.48
USP43-202ENST00000570475 USP9YO00507 2555 aaPredicted RBP12.04□□□□□ -0.48
USP43-202ENST00000570475 HBDP02042 147 aa12.03□□□□□ -0.48
USP43-202ENST00000570475 S100A4P26447 101 aaKnown RBP12.03□□□□□ -0.48
USP43-202ENST00000570475 SPANXN1Q5VSR9 72 aa12.03□□□□□ -0.48
USP43-202ENST00000570475 C1RLQ9NZP8 487 aa12.03□□□□□ -0.48
USP43-202ENST00000570475 COL12A1Q99715 3063 aa12.03□□□□□ -0.48
USP43-202ENST00000570475 HIVEP3Q5T1R4 2406 aa12.03□□□□□ -0.48
USP43-202ENST00000570475 C15orf32Q32M92 178 aa12.03□□□□□ -0.48
USP43-202ENST00000570475 Q8NA96 180 aa12.03□□□□□ -0.48
USP43-202ENST00000570475 MAP1LC3AQ9H492 121 aa12.03□□□□□ -0.48
USP43-202ENST00000570475 UBTD1Q9HAC8 227 aa12.03□□□□□ -0.48
USP43-202ENST00000570475 KAAG1Q9UBP8 84 aa12.03□□□□□ -0.48
USP43-202ENST00000570475 A6NDN8 102 aa12.03□□□□□ -0.48
USP43-202ENST00000570475 INS-IGF2F8WCM5 200 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms