RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 IGLL5B9A064 214 aa6.81□□□□□ -1.32
SF3B3-211ENST00000568291 M0R3E3 92 aa6.81□□□□□ -1.32
SF3B3-211ENST00000568291 DUSP14O95147 198 aaKnown RBP6.81□□□□□ -1.32
SF3B3-211ENST00000568291 NDUFB4O95168 129 aa6.81□□□□□ -1.32
SF3B3-211ENST00000568291 OR10J4P0C629 311 aa6.81□□□□□ -1.32
SF3B3-211ENST00000568291 AZU1P20160 251 aa6.81□□□□□ -1.32
SF3B3-211ENST00000568291 ERCC8Q13216 396 aa6.81□□□□□ -1.32
SF3B3-211ENST00000568291 C12orf74Q32Q52 190 aa6.81□□□□□ -1.32
SF3B3-211ENST00000568291 S100A7AQ86SG5 101 aa6.81□□□□□ -1.32
SF3B3-211ENST00000568291 EXOC3-AS1Q8N2X6 119 aa6.81□□□□□ -1.32
SF3B3-211ENST00000568291 PFDN5Q99471 154 aa6.81□□□□□ -1.32
SF3B3-211ENST00000568291 ATP5SQ99766 215 aa6.81□□□□□ -1.32
SF3B3-211ENST00000568291 TMEM208Q9BTX3 173 aa6.81□□□□□ -1.32
SF3B3-211ENST00000568291 SLC25A2Q9BXI2 301 aa6.81□□□□□ -1.32
SF3B3-211ENST00000568291 HRH4Q9H3N8 390 aa6.81□□□□□ -1.32
SF3B3-211ENST00000568291 PPP1R14DQ9NXH3 145 aa6.81□□□□□ -1.32
SF3B3-211ENST00000568291 TRBV19A0A075B6N1 114 aa6.8□□□□□ -1.32
SF3B3-211ENST00000568291 FFAR4Q5NUL3 377 aa6.8□□□□□ -1.32
SF3B3-211ENST00000568291 SAMD13Q5VXD3 122 aa6.8□□□□□ -1.32
SF3B3-211ENST00000568291 LCN15Q6UWW0 184 aa6.8□□□□□ -1.32
SF3B3-211ENST00000568291 CHAC2Q8WUX2 184 aa6.8□□□□□ -1.32
SF3B3-211ENST00000568291 FAM167A-AS1Q96KT0 104 aa6.8□□□□□ -1.32
SF3B3-211ENST00000568291 IGF2BP2-AS1Q96M15 143 aa6.8□□□□□ -1.32
SF3B3-211ENST00000568291 CLUHP3Q96NS8 147 aa6.8□□□□□ -1.32
SF3B3-211ENST00000568291 GOLT1BQ9Y3E0 138 aa6.8□□□□□ -1.32
SF3B3-211ENST00000568291 HECTD4Q9Y4D8 3996 aa6.8□□□□□ -1.32
SF3B3-211ENST00000568291 LOC102723971A0A1B0GUV8 181 aa6.79□□□□□ -1.32
SF3B3-211ENST00000568291 A8MTW9 85 aa6.79□□□□□ -1.32
SF3B3-211ENST00000568291 BOLA2-SMG1P6H3BVE0 249 aa6.79□□□□□ -1.32
SF3B3-211ENST00000568291 HMGB3O15347 200 aaKnown RBP6.79□□□□□ -1.32
SF3B3-211ENST00000568291 MPDU1O75352 247 aa6.79□□□□□ -1.32
SF3B3-211ENST00000568291 IFNA5P01569 189 aa6.79□□□□□ -1.32
SF3B3-211ENST00000568291 HBE1P02100 147 aa6.79□□□□□ -1.32
SF3B3-211ENST00000568291 CT45A10P0DMU9 189 aa6.79□□□□□ -1.32
SF3B3-211ENST00000568291 HTN3P15516 51 aa6.79□□□□□ -1.32
SF3B3-211ENST00000568291 FAM222AQ5U5X8 452 aa6.79□□□□□ -1.32
SF3B3-211ENST00000568291 FAM122CQ6P4D5 195 aa6.79□□□□□ -1.32
SF3B3-211ENST00000568291 SCGB1C1Q8TD33 95 aa6.79□□□□□ -1.32
SF3B3-211ENST00000568291 LINC01587Q99440 93 aa6.79□□□□□ -1.32
SF3B3-211ENST00000568291 SLC50A1Q9BRV3 221 aa6.79□□□□□ -1.32
SF3B3-211ENST00000568291 YTHDF2Q9Y5A9 579 aaKnown RBP6.79□□□□□ -1.32
SF3B3-211ENST00000568291 TIMM9Q9Y5J7 89 aa6.79□□□□□ -1.32
SF3B3-211ENST00000568291 HERC2O95714 4834 aa6.79□□□□□ -1.32
SF3B3-211ENST00000568291 SMLR1H3BR10 107 aa6.78□□□□□ -1.32
SF3B3-211ENST00000568291 INSP01308 110 aa6.78□□□□□ -1.32
SF3B3-211ENST00000568291 PET100P0DJ07 73 aa6.78□□□□□ -1.32
SF3B3-211ENST00000568291 HIST1H1EP10412 219 aaKnown RBP6.78□□□□□ -1.32
SF3B3-211ENST00000568291 ICAM4Q14773 271 aa6.78□□□□□ -1.32
SF3B3-211ENST00000568291 RRN3P1Q2M238 152 aa6.78□□□□□ -1.32
SF3B3-211ENST00000568291 RGS21Q2M5E4 152 aa6.78□□□□□ -1.32
SF3B3-211ENST00000568291 C2CD4CQ8TF44 421 aa6.78□□□□□ -1.32
SF3B3-211ENST00000568291 FXYD5Q96DB9 178 aa6.78□□□□□ -1.32
SF3B3-211ENST00000568291 ZNF503Q96F45 646 aa6.78□□□□□ -1.32
SF3B3-211ENST00000568291 NEU1Q99519 415 aa6.78□□□□□ -1.32
SF3B3-211ENST00000568291 OR51M1Q9H341 326 aa6.78□□□□□ -1.32
SF3B3-211ENST00000568291 TMEM14CQ9P0S9 112 aa6.78□□□□□ -1.32
SF3B3-211ENST00000568291 FUT9Q9Y231 359 aa6.78□□□□□ -1.32
SF3B3-211ENST00000568291 IGKV2-40A0A087WW87 121 aaPredicted RBP6.77□□□□□ -1.33
SF3B3-211ENST00000568291 DEFB131BA0A096LNP1 70 aa6.77□□□□□ -1.33
SF3B3-211ENST00000568291 C17orf112F2Z3M2 114 aa6.77□□□□□ -1.33
SF3B3-211ENST00000568291 IGKV2D-40P01614 121 aaPredicted RBP6.77□□□□□ -1.33
SF3B3-211ENST00000568291 NBEAP1P0C6P0 100 aa6.77□□□□□ -1.33
SF3B3-211ENST00000568291 SPART-AS1P0CW21 52 aa6.77□□□□□ -1.33
SF3B3-211ENST00000568291 CXCL2P19875 107 aa6.77□□□□□ -1.33
SF3B3-211ENST00000568291 RAB2AP61019 212 aa6.77□□□□□ -1.33
SF3B3-211ENST00000568291 RANP62826 216 aaKnown RBP6.77□□□□□ -1.33
SF3B3-211ENST00000568291 GUK1Q16774 197 aa6.77□□□□□ -1.33
SF3B3-211ENST00000568291 Q6ZQT7 251 aa6.77□□□□□ -1.33
SF3B3-211ENST00000568291 HSD17B11Q8NBQ5 300 aa6.77□□□□□ -1.33
SF3B3-211ENST00000568291 OR10J6PQ8NGY7 276 aa6.77□□□□□ -1.33
SF3B3-211ENST00000568291 RNF141Q8WVD5 230 aa6.77□□□□□ -1.33
SF3B3-211ENST00000568291 PHYHIPLQ96FC7 376 aa6.77□□□□□ -1.33
SF3B3-211ENST00000568291 PAXXQ9BUH6 204 aa6.77□□□□□ -1.33
SF3B3-211ENST00000568291 DKK2Q9UBU2 259 aa6.77□□□□□ -1.33
SF3B3-211ENST00000568291 APLNQ9ULZ1 77 aa6.77□□□□□ -1.33
SF3B3-211ENST00000568291 RNF24Q9Y225 148 aa6.77□□□□□ -1.33
SF3B3-211ENST00000568291 FXYD6-FXYD2A0A087WZ82 144 aa6.76□□□□□ -1.33
SF3B3-211ENST00000568291 TRAV10A0A0B4J240 114 aa6.76□□□□□ -1.33
SF3B3-211ENST00000568291 TRAV12-3A0A0B4J271 114 aa6.76□□□□□ -1.33
SF3B3-211ENST00000568291 SMIM9A6NGZ8 99 aa6.76□□□□□ -1.33
SF3B3-211ENST00000568291 OR7C2O60412 319 aa6.76□□□□□ -1.33
SF3B3-211ENST00000568291 DEFB130BP0DP73 79 aa6.76□□□□□ -1.33
SF3B3-211ENST00000568291 DEFB130AP0DP74 79 aa6.76□□□□□ -1.33
SF3B3-211ENST00000568291 CDKN1BP46527 198 aa6.76□□□□□ -1.33
SF3B3-211ENST00000568291 TCTAP57738 103 aa6.76□□□□□ -1.33
SF3B3-211ENST00000568291 OXA1LQ15070 435 aa6.76□□□□□ -1.33
SF3B3-211ENST00000568291 GFI1BQ5VTD9 330 aa6.76□□□□□ -1.33
SF3B3-211ENST00000568291 VGLL1Q99990 258 aa6.76□□□□□ -1.33
SF3B3-211ENST00000568291 AGPAT4-IT1Q9H0P7 198 aa6.76□□□□□ -1.33
SF3B3-211ENST00000568291 DNAH10Q8IVF4 4471 aa6.75□□□□□ -1.33
SF3B3-211ENST00000568291 IGHV4-4A0A075B6R2 117 aa6.75□□□□□ -1.33
SF3B3-211ENST00000568291 PLAC8L1A1L4L8 177 aa6.75□□□□□ -1.33
SF3B3-211ENST00000568291 C11orf94C9JXX5 98 aa6.75□□□□□ -1.33
SF3B3-211ENST00000568291 NPIPB6E9PJ23 425 aa6.75□□□□□ -1.33
SF3B3-211ENST00000568291 AMBPP02760 352 aa6.75□□□□□ -1.33
SF3B3-211ENST00000568291 RNASE4P34096 147 aaKnown RBP6.75□□□□□ -1.33
SF3B3-211ENST00000568291 CD300CQ08708 224 aa6.75□□□□□ -1.33
SF3B3-211ENST00000568291 OR2T35Q8NGX2 323 aa6.75□□□□□ -1.33
SF3B3-211ENST00000568291 Q8TAT8 98 aa6.75□□□□□ -1.33
SF3B3-211ENST00000568291 HYLS1Q96M11 299 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms