RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 TMEM200BQ69YZ2 307 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 SYT8Q8NBV8 401 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 HAX1O00165 279 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 PRSS2P07478 247 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 GATA1P15976 413 aaPredicted RBP8.72□□□□□ -1.01
PALB2-206ENST00000568219 PRTN3P24158 256 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 RPS20P60866 119 aaKnown RBP8.72□□□□□ -1.01
PALB2-206ENST00000568219 SCGB3A1Q96QR1 104 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 PGPEP1Q9NXJ5 209 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 RAXQ9Y2V3 346 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 TRAV26-1A0A087WT03 109 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 IGKV3-15P01624 115 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 FOXE3Q13461 319 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 EIF4EBP1Q13541 118 aaPredicted RBP8.72□□□□□ -1.01
PALB2-206ENST00000568219 FAM104BQ5XKR9 115 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 TMEM167AQ8TBQ9 72 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 IGFBPL1Q8WX77 278 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 MSRB1Q9NZV6 116 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.71□□□□□ -1.01
PALB2-206ENST00000568219 SS18L1O75177 396 aaPredicted RBP8.71□□□□□ -1.01
PALB2-206ENST00000568219 ECSCRQ19T08 205 aa8.71□□□□□ -1.01
PALB2-206ENST00000568219 Q6AWC8 147 aa8.71□□□□□ -1.01
PALB2-206ENST00000568219 C1orf122Q6ZSJ8 110 aa8.71□□□□□ -1.01
PALB2-206ENST00000568219 TTC32Q5I0X7 151 aa8.71□□□□□ -1.01
PALB2-206ENST00000568219 DDB2Q92466 427 aa8.71□□□□□ -1.01
PALB2-206ENST00000568219 GAFA1Q96PS6 74 aa8.71□□□□□ -1.01
PALB2-206ENST00000568219 A0A1B0GW15 77 aa8.71□□□□□ -1.02
PALB2-206ENST00000568219 PRSS47A8MTI9 375 aa8.71□□□□□ -1.02
PALB2-206ENST00000568219 C22orf46C9J442 243 aa8.71□□□□□ -1.02
PALB2-206ENST00000568219 TM4SF5O14894 197 aa8.71□□□□□ -1.02
PALB2-206ENST00000568219 SMIM17P0DL12 118 aa8.71□□□□□ -1.02
PALB2-206ENST00000568219 C3orf36Q3SXR2 165 aa8.71□□□□□ -1.02
PALB2-206ENST00000568219 C1orf210Q8IVY1 113 aa8.71□□□□□ -1.02
PALB2-206ENST00000568219 GFRA4Q9GZZ7 299 aa8.71□□□□□ -1.02
PALB2-206ENST00000568219 TMEM238LA0A1B0GVL6 79 aa8.71□□□□□ -1.02
PALB2-206ENST00000568219 A0A1B0GXF2 115 aa8.71□□□□□ -1.02
PALB2-206ENST00000568219 A6NJY4 79 aa8.71□□□□□ -1.02
PALB2-206ENST00000568219 LGALS9BQ3B8N2 356 aa8.71□□□□□ -1.02
PALB2-206ENST00000568219 LGALS9CQ6DKI2 356 aa8.71□□□□□ -1.02
PALB2-206ENST00000568219 TMEM170BQ5T4T1 132 aa8.7□□□□□ -1.02
PALB2-206ENST00000568219 C2orf91Q6ZV80 131 aa8.7□□□□□ -1.02
PALB2-206ENST00000568219 RITA1Q96K30 269 aa8.7□□□□□ -1.02
PALB2-206ENST00000568219 MRPL35Q9NZE8 188 aaKnown RBP8.7□□□□□ -1.02
PALB2-206ENST00000568219 ZNF492Q9P255 531 aa8.7□□□□□ -1.02
PALB2-206ENST00000568219 TRAV8-2A0A0B4J237 113 aa8.7□□□□□ -1.02
PALB2-206ENST00000568219 TRAV26-2A0A0B4J265 109 aa8.7□□□□□ -1.02
PALB2-206ENST00000568219 ATP5LO75964 103 aa8.7□□□□□ -1.02
PALB2-206ENST00000568219 SRSF6Q13247 344 aaKnown RBP8.7□□□□□ -1.02
PALB2-206ENST00000568219 CT83Q5H943 113 aa8.7□□□□□ -1.02
PALB2-206ENST00000568219 LYPD2Q6UXB3 125 aa8.7□□□□□ -1.02
PALB2-206ENST00000568219 TRGV9Q99603 122 aa8.7□□□□□ -1.02
PALB2-206ENST00000568219 TRBV25-1A0A075B6N4 114 aa8.7□□□□□ -1.02
PALB2-206ENST00000568219 TMEM78Q5T7P6 136 aa8.7□□□□□ -1.02
PALB2-206ENST00000568219 ZNF815PA8K554 130 aa8.69□□□□□ -1.02
PALB2-206ENST00000568219 PRRG2O14669 202 aa8.69□□□□□ -1.02
PALB2-206ENST00000568219 SPRY2O43597 315 aa8.69□□□□□ -1.02
PALB2-206ENST00000568219 MFAP4P55083 255 aa8.69□□□□□ -1.02
PALB2-206ENST00000568219 SORL1Q92673 2214 aa8.69□□□□□ -1.02
PALB2-206ENST00000568219 EFNA4P52798 201 aa8.69□□□□□ -1.02
PALB2-206ENST00000568219 LYRM7Q5U5X0 104 aa8.69□□□□□ -1.02
PALB2-206ENST00000568219 FABP5P3A8MUU1 101 aa8.69□□□□□ -1.02
PALB2-206ENST00000568219 TNFRSF6BO95407 300 aa8.69□□□□□ -1.02
PALB2-206ENST00000568219 Q71RC1 249 aaPredicted RBP8.69□□□□□ -1.02
PALB2-206ENST00000568219 BOD1L2Q8IYS8 172 aa8.69□□□□□ -1.02
PALB2-206ENST00000568219 ZNF71Q9NQZ8 489 aaPredicted RBP8.69□□□□□ -1.02
PALB2-206ENST00000568219 ERCC8Q13216 396 aa8.68□□□□□ -1.02
PALB2-206ENST00000568219 TEX29Q8N6K0 151 aa8.68□□□□□ -1.02
PALB2-206ENST00000568219 NXT2Q9NPJ8 142 aaKnown RBP8.68□□□□□ -1.02
PALB2-206ENST00000568219 PTPRSQ13332 1948 aa8.68□□□□□ -1.02
PALB2-206ENST00000568219 SPAARA0A1B0GVQ0 90 aa8.68□□□□□ -1.02
PALB2-206ENST00000568219 HTN1P15515 57 aa8.68□□□□□ -1.02
PALB2-206ENST00000568219 LINC01549A6NIU2 74 aa8.68□□□□□ -1.02
PALB2-206ENST00000568219 ANKHD1Q8IWZ3 2542 aaKnown RBP8.67□□□□□ -1.02
PALB2-206ENST00000568219 DLX6P56179 175 aa8.67□□□□□ -1.02
PALB2-206ENST00000568219 CHTOPQ9Y3Y2 248 aaKnown RBP8.67□□□□□ -1.02
PALB2-206ENST00000568219 C16orf97H3BN30 126 aa8.67□□□□□ -1.02
PALB2-206ENST00000568219 HLA-DMBP28068 263 aa8.67□□□□□ -1.02
PALB2-206ENST00000568219 CRYBA4P53673 196 aa8.67□□□□□ -1.02
PALB2-206ENST00000568219 MSMPQ1L6U9 139 aa8.67□□□□□ -1.02
PALB2-206ENST00000568219 C12orf74Q32Q52 190 aa8.67□□□□□ -1.02
PALB2-206ENST00000568219 C20orf78Q9BR46 151 aa8.67□□□□□ -1.02
PALB2-206ENST00000568219 TRBV19A0A075B6N1 114 aa8.67□□□□□ -1.02
PALB2-206ENST00000568219 IGHV3-64A0A075B6Q5 118 aa8.67□□□□□ -1.02
PALB2-206ENST00000568219 F8W1H4 67 aa8.67□□□□□ -1.02
PALB2-206ENST00000568219 CRXO43186 299 aaPredicted RBP8.67□□□□□ -1.02
PALB2-206ENST00000568219 SNCGO76070 127 aa8.67□□□□□ -1.02
PALB2-206ENST00000568219 RAX2Q96IS3 184 aa8.67□□□□□ -1.02
PALB2-206ENST00000568219 SS18L2Q9UHA2 77 aa8.67□□□□□ -1.02
PALB2-206ENST00000568219 PHLDA3Q9Y5J5 127 aa8.67□□□□□ -1.02
PALB2-206ENST00000568219 HERVK_113P61574 105 aa8.66□□□□□ -1.02
PALB2-206ENST00000568219 CEND1Q8N111 149 aa8.66□□□□□ -1.02
PALB2-206ENST00000568219 PTH2Q96A98 100 aa8.66□□□□□ -1.02
PALB2-206ENST00000568219 SIGLEC9Q9Y336 463 aa8.66□□□□□ -1.02
PALB2-206ENST00000568219 SLC25A15Q9Y619 301 aa8.66□□□□□ -1.02
PALB2-206ENST00000568219 IGKV2D-26A0A0A0MRZ7 120 aa8.66□□□□□ -1.02
PALB2-206ENST00000568219 MDS2Q8NDY4 140 aa8.66□□□□□ -1.02
PALB2-206ENST00000568219 SPAG8Q99932 426 aaPredicted RBP8.66□□□□□ -1.02
PALB2-206ENST00000568219 C21orf62Q9NYP8 219 aa8.66□□□□□ -1.02
PALB2-206ENST00000568219 IGLL5B9A064 214 aa8.66□□□□□ -1.02
PALB2-206ENST00000568219 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms