RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 TXNDC17Q9BRA2 123 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 Q9H3A6 140 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 ESM1Q9NQ30 184 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 SMCO4Q9NRQ5 59 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 TMEM14CQ9P0S9 112 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 RPH3ALQ9UNE2 315 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 COX11Q9Y6N1 276 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 CMYA5Q8N3K9 4069 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 TRBV19A0A075B6N1 114 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.37□□□□□ -1.71
SF3B3-210ENST00000567654 TRBV7-1A0A0A6YYK4 115 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 TGIF2-C20orf24A0A0A6YYL0 155 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 LOC105371267A0A1B0GV96 52 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 PGPA6NDG6 321 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 DNAJC9-AS1A6NH13 148 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 C9JCJ5 164 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 H3BUA1 57 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 BMPR1BO00238 502 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 ISLRO14498 428 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 IGHG4P01861 327 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 SLC25A5P05141 298 aaKnown RBP4.37□□□□□ -1.71
SF3B3-210ENST00000567654 CRYBA1P05813 215 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 FABP1P07148 127 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 HIST1H1EP10412 219 aaKnown RBP4.37□□□□□ -1.71
SF3B3-210ENST00000567654 PSMB8P28062 276 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 RAB9AP51151 201 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 SUMO4Q6EEV6 95 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 SIGLEC15Q6ZMC9 328 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 C18orf65Q6ZTR6 163 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 OR5B12Q96R08 314 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 TUBA4BQ9H853 241 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 YAE1D1Q9NRH1 226 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 RABAC1Q9UI14 185 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 ZNF580Q9UK33 172 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 SELENOKQ9Y6D0 94 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 URGCP-MRPS24S4R325 110 aa4.37□□□□□ -1.71
SF3B3-210ENST00000567654 OTOGQ6ZRI0 2925 aa4.36□□□□□ -1.71
SF3B3-210ENST00000567654 TRAV8-1A0A0A6YYK1 113 aa4.36□□□□□ -1.71
SF3B3-210ENST00000567654 HELTA6NFD8 242 aa4.36□□□□□ -1.71
SF3B3-210ENST00000567654 B4DEV8 164 aa4.36□□□□□ -1.71
SF3B3-210ENST00000567654 M0R3E3 92 aa4.36□□□□□ -1.71
SF3B3-210ENST00000567654 BUB3O43684 328 aa4.36□□□□□ -1.71
SF3B3-210ENST00000567654 TNFRSF6BO95407 300 aa4.36□□□□□ -1.71
SF3B3-210ENST00000567654 IGLV2-11P01706 119 aa4.36□□□□□ -1.71
SF3B3-210ENST00000567654 PFN1P07737 140 aaKnown RBP4.36□□□□□ -1.71
SF3B3-210ENST00000567654 ARL3P36405 182 aa4.36□□□□□ -1.71
SF3B3-210ENST00000567654 TEX38Q6PEX7 206 aa4.36□□□□□ -1.71
SF3B3-210ENST00000567654 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.36□□□□□ -1.71
SF3B3-210ENST00000567654 C15orf54Q8N8G6 183 aa4.36□□□□□ -1.71
SF3B3-210ENST00000567654 STXBP6Q8NFX7 210 aa4.36□□□□□ -1.71
SF3B3-210ENST00000567654 OR4X2Q8NGF9 303 aa4.36□□□□□ -1.71
SF3B3-210ENST00000567654 OTORQ9NRC9 128 aa4.36□□□□□ -1.71
SF3B3-210ENST00000567654 EPDR1Q9UM22 224 aa4.36□□□□□ -1.71
SF3B3-210ENST00000567654 NF1P21359 2839 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 ZNF320A2RRD8 509 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 CLDN34H7C241 214 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 GCGP01275 180 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 TCRAP04437 139 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 RAB5AP20339 215 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 SRP14P37108 136 aaKnown RBP4.35□□□□□ -1.71
SF3B3-210ENST00000567654 TMEM183BQ1AE95 376 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 TCTEX1D4Q5JR98 221 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 LINC00322Q6ZN03 302 aaPredicted RBP4.35□□□□□ -1.71
SF3B3-210ENST00000567654 Q6ZSV7 163 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 GOLT1AQ6ZVE7 132 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 BPIFA4PQ86YQ2 179 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 GPHB5Q86YW7 130 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 ZFP82Q8N141 532 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 Q8N2B8 174 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 C5orf17Q8NAS9 161 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 MYOZ3Q8TDC0 251 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 SFRP2Q96HF1 295 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 USMG5Q96IX5 58 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 ATG101Q9BSB4 218 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 PRSS22Q9GZN4 317 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 CTDSP1Q9GZU7 261 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 RNASE7Q9H1E1 156 aaKnown RBP4.35□□□□□ -1.71
SF3B3-210ENST00000567654 V9GYV3 84 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 WNK1Q9H4A3 2382 aa4.35□□□□□ -1.71
SF3B3-210ENST00000567654 IGHV4OR15-8A0A075B7B6 117 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 A0A087WW49 117 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 IGKV2-40A0A087WW87 121 aaPredicted RBP4.34□□□□□ -1.71
SF3B3-210ENST00000567654 A0A087X0K7 114 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 TRAV8-2A0A0B4J237 113 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 ZNF705FA8MVS1 300 aaPredicted RBP4.34□□□□□ -1.71
SF3B3-210ENST00000567654 PRAC2D3DTV9 90 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 H7BYZ3 331 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 NDUFA4O00483 81 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 PHOX2AO14813 284 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 LY6G6DO95868 133 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 CA1P00915 261 aaPredicted RBP4.34□□□□□ -1.71
SF3B3-210ENST00000567654 IGKV2D-40P01614 121 aaPredicted RBP4.34□□□□□ -1.71
SF3B3-210ENST00000567654 MT-ND4LP03901 98 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 FRMD6-AS1P0C7T7 363 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 MGST1P10620 155 aaKnown RBP4.34□□□□□ -1.71
SF3B3-210ENST00000567654 FOLR2P14207 255 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 GALR1P47211 349 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 GNG4P50150 75 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 CNN1P51911 297 aaKnown RBP4.34□□□□□ -1.71
SF3B3-210ENST00000567654 FAM3BP58499 235 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms