RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ZNF331Q9NQX6 463 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-213ENST00000565173 LSM5Q9Y4Y9 91 aaKnown RBP5.98□□□□□ -1.45
CAPN3-213ENST00000565173 TIMM8BQ9Y5J9 83 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-213ENST00000565173 H7BYZ3 331 aa5.97□□□□□ -1.45
CAPN3-213ENST00000565173 L7N2F9 121 aa5.97□□□□□ -1.45
CAPN3-213ENST00000565173 AGPAT2O15120 278 aa5.97□□□□□ -1.45
CAPN3-213ENST00000565173 CXCL2P19875 107 aa5.97□□□□□ -1.45
CAPN3-213ENST00000565173 CDKN1BP46527 198 aa5.97□□□□□ -1.45
CAPN3-213ENST00000565173 CCL18P55774 89 aa5.97□□□□□ -1.45
CAPN3-213ENST00000565173 TAS2R30P59541 319 aa5.97□□□□□ -1.45
CAPN3-213ENST00000565173 S100A10P60903 97 aa5.97□□□□□ -1.45
CAPN3-213ENST00000565173 VAMP2P63027 116 aa5.97□□□□□ -1.45
CAPN3-213ENST00000565173 PXDC1Q5TGL8 231 aa5.97□□□□□ -1.45
CAPN3-213ENST00000565173 LINC00305Q7Z4B0 112 aa5.97□□□□□ -1.45
CAPN3-213ENST00000565173 OR10P1Q8NGE3 313 aa5.97□□□□□ -1.45
CAPN3-213ENST00000565173 LRRC20Q8TCA0 184 aa5.97□□□□□ -1.45
CAPN3-213ENST00000565173 TMEM263Q8WUH6 116 aaKnown RBP5.97□□□□□ -1.45
CAPN3-213ENST00000565173 SAT2Q96F10 170 aaPredicted RBP5.97□□□□□ -1.45
CAPN3-213ENST00000565173 MGAT4CQ9UBM8 478 aa5.97□□□□□ -1.45
CAPN3-213ENST00000565173 RCL1Q9Y2P8 373 aaKnown RBP5.97□□□□□ -1.45
CAPN3-213ENST00000565173 C16orf90A8MZG2 172 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 H3BQ15 152 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 SLC17A3O00476 420 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 TSC22D2O75157 780 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 CDK2AP2O75956 126 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 IGLC2P0DOY2 106 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 HOXA5P20719 270 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 RAB32Q13637 225 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 GFI1BQ5VTD9 330 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 LCN15Q6UWW0 184 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 SSX7Q7RTT5 188 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 S100A7AQ86SG5 101 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 ZNF546Q86UE3 836 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 BPIFA4PQ86YQ2 179 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 MGST2Q99735 147 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 C20orf144Q9BQM9 153 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 GGACTQ9BVM4 153 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 PARD6GQ9BYG4 376 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-213ENST00000565173 KRTAP1-5Q9BYS1 174 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 MED28Q9H204 178 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 PPP1R14DQ9NXH3 145 aa5.96□□□□□ -1.46
CAPN3-213ENST00000565173 TRAV26-1A0A087WT03 109 aa5.95□□□□□ -1.46
CAPN3-213ENST00000565173 H3BTX0 84 aa5.95□□□□□ -1.46
CAPN3-213ENST00000565173 CT45A10P0DMU9 189 aa5.95□□□□□ -1.46
CAPN3-213ENST00000565173 PVALBP20472 110 aaPredicted RBP5.95□□□□□ -1.46
CAPN3-213ENST00000565173 BCAP31P51572 246 aa5.95□□□□□ -1.46
CAPN3-213ENST00000565173 CAV2P51636 162 aa5.95□□□□□ -1.46
CAPN3-213ENST00000565173 H2BFSP57053 126 aa5.95□□□□□ -1.46
CAPN3-213ENST00000565173 CYCSP99999 105 aaKnown RBP5.95□□□□□ -1.46
CAPN3-213ENST00000565173 IL15RAQ13261 267 aa5.95□□□□□ -1.46
CAPN3-213ENST00000565173 OR5I1Q13606 314 aa5.95□□□□□ -1.46
CAPN3-213ENST00000565173 OPCMLQ14982 345 aa5.95□□□□□ -1.46
CAPN3-213ENST00000565173 LRRC37A5PQ49AS3 106 aa5.95□□□□□ -1.46
CAPN3-213ENST00000565173 SLC50A1Q9BRV3 221 aa5.95□□□□□ -1.46
CAPN3-213ENST00000565173 C11orf1Q9H5F2 150 aa5.95□□□□□ -1.46
CAPN3-213ENST00000565173 Q9H8V8 135 aa5.95□□□□□ -1.46
CAPN3-213ENST00000565173 RNF24Q9Y225 148 aa5.95□□□□□ -1.46
CAPN3-213ENST00000565173 TRAV5A0A0B4J249 113 aa5.94□□□□□ -1.46
CAPN3-213ENST00000565173 COX7A2P2O60397 106 aa5.94□□□□□ -1.46
CAPN3-213ENST00000565173 RLN2P04090 185 aa5.94□□□□□ -1.46
CAPN3-213ENST00000565173 M6PRP20645 277 aa5.94□□□□□ -1.46
CAPN3-213ENST00000565173 CLINT1Q14677 625 aa5.94□□□□□ -1.46
CAPN3-213ENST00000565173 ESRGQ1W209 222 aa5.94□□□□□ -1.46
CAPN3-213ENST00000565173 OR10J6PQ8NGY7 276 aa5.94□□□□□ -1.46
CAPN3-213ENST00000565173 RXFP4Q8TDU9 374 aa5.94□□□□□ -1.46
CAPN3-213ENST00000565173 ZNF503Q96F45 646 aa5.94□□□□□ -1.46
CAPN3-213ENST00000565173 NMES1Q9C002 83 aa5.94□□□□□ -1.46
CAPN3-213ENST00000565173 Q9H3A6 140 aa5.94□□□□□ -1.46
CAPN3-213ENST00000565173 DNAJC4Q9NNZ3 241 aa5.94□□□□□ -1.46
CAPN3-213ENST00000565173 FAT1Q14517 4588 aa5.94□□□□□ -1.46
CAPN3-213ENST00000565173 A0A0J9YY99 117 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 GAGE12BA1L429 117 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 FAM24AA6NFZ4 105 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 NPIPB6E9PJ23 425 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 H3BNG1 76 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 GAGE7O76087 117 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 GAGE12FP0CL80 117 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 GAGE12GP0CL81 117 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 GAGE12IP0CL82 117 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 CAMLGP49069 296 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 DAZ2Q13117 558 aaKnown RBP5.93□□□□□ -1.46
CAPN3-213ENST00000565173 VWC2Q2TAL6 325 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 C10orf113Q5VZT2 155 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 MIC13Q5XKP0 118 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 PPP1R1CQ8WVI7 109 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 GNPNAT1Q96EK6 184 aaPredicted RBP5.93□□□□□ -1.46
CAPN3-213ENST00000565173 ODF3Q96PU9 254 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 UPK3BQ9BT76 320 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 ZNF586Q9NXT0 402 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 OR5AC2Q9NZP5 309 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 PXMP4Q9Y6I8 212 aa5.93□□□□□ -1.46
CAPN3-213ENST00000565173 TRAV12-3A0A0B4J271 114 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 E5RGE8 158 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 H0YIZ8 118 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 J3KRW8 73 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 ZNF324O75467 553 aaPredicted RBP5.92□□□□□ -1.46
CAPN3-213ENST00000565173 CST7O76096 145 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 MPC2O95563 127 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 PET100P0DJ07 73 aa5.92□□□□□ -1.46
CAPN3-213ENST00000565173 KRTAP10-2P60368 255 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms