RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 LINC00612Q8N6U2 182 aa16.66■□□□□ 0.26
NME3-206ENST00000564252 LSM5Q9Y4Y9 91 aaKnown RBP16.66■□□□□ 0.26
NME3-206ENST00000564252 ZNF846Q147U1 533 aa16.65■□□□□ 0.26
NME3-206ENST00000564252 MIC13Q5XKP0 118 aa16.65■□□□□ 0.26
NME3-206ENST00000564252 NRARPQ7Z6K4 114 aa16.65■□□□□ 0.26
NME3-206ENST00000564252 C6orf223Q8N319 242 aa16.65■□□□□ 0.26
NME3-206ENST00000564252 DNAJC4Q9NNZ3 241 aa16.65■□□□□ 0.26
NME3-206ENST00000564252 LYRM1O43325 122 aa16.64■□□□□ 0.25
NME3-206ENST00000564252 CST7O76096 145 aa16.64■□□□□ 0.25
NME3-206ENST00000564252 BCAP31P51572 246 aa16.64■□□□□ 0.25
NME3-206ENST00000564252 TRAV5A0A0B4J249 113 aa16.63■□□□□ 0.25
NME3-206ENST00000564252 FAM25EA8MYX2 175 aa16.63■□□□□ 0.25
NME3-206ENST00000564252 CAV2P51636 162 aa16.63■□□□□ 0.25
NME3-206ENST00000564252 RAB31Q13636 194 aa16.63■□□□□ 0.25
NME3-206ENST00000564252 Q6ZRG5 221 aa16.63■□□□□ 0.25
NME3-206ENST00000564252 WDR83OSQ9Y284 106 aa16.63■□□□□ 0.25
NME3-206ENST00000564252 TRAV6A0A075B6T7 132 aa16.62■□□□□ 0.25
NME3-206ENST00000564252 FAM24AA6NFZ4 105 aa16.62■□□□□ 0.25
NME3-206ENST00000564252 TCRBP04435 133 aa16.62■□□□□ 0.25
NME3-206ENST00000564252 CT45A10P0DMU9 189 aa16.62■□□□□ 0.25
NME3-206ENST00000564252 CLINT1Q14677 625 aa16.62■□□□□ 0.25
NME3-206ENST00000564252 GUK1Q16774 197 aa16.62■□□□□ 0.25
NME3-206ENST00000564252 VWC2Q2TAL6 325 aa16.62■□□□□ 0.25
NME3-206ENST00000564252 SSX7Q7RTT5 188 aa16.62■□□□□ 0.25
NME3-206ENST00000564252 CCDC28AQ8IWP9 274 aa16.62■□□□□ 0.25
NME3-206ENST00000564252 OR1L4Q8NGR5 311 aa16.62■□□□□ 0.25
NME3-206ENST00000564252 ZNF431Q8TF32 576 aaPredicted RBP16.62■□□□□ 0.25
NME3-206ENST00000564252 ODF3Q96PU9 254 aa16.62■□□□□ 0.25
NME3-206ENST00000564252 SEC22CQ9BRL7 303 aa16.62■□□□□ 0.25
NME3-206ENST00000564252 UQCC1Q9NVA1 299 aa16.62■□□□□ 0.25
NME3-206ENST00000564252 C5orf51A6NDU8 294 aa16.61■□□□□ 0.25
NME3-206ENST00000564252 NPIPB6E9PJ23 425 aa16.61■□□□□ 0.25
NME3-206ENST00000564252 OR5I1Q13606 314 aa16.61■□□□□ 0.25
NME3-206ENST00000564252 ZNF586Q9NXT0 402 aa16.61■□□□□ 0.25
NME3-206ENST00000564252 TRAV26-1A0A087WT03 109 aa16.6■□□□□ 0.25
NME3-206ENST00000564252 J3KRW8 73 aa16.6■□□□□ 0.25
NME3-206ENST00000564252 HOXA5P20719 270 aa16.6■□□□□ 0.25
NME3-206ENST00000564252 LEPP41159 167 aa16.6■□□□□ 0.25
NME3-206ENST00000564252 GNPNAT1Q96EK6 184 aaPredicted RBP16.6■□□□□ 0.25
NME3-206ENST00000564252 C2orf50Q96LR7 162 aa16.6■□□□□ 0.25
NME3-206ENST00000564252 PFDN5Q99471 154 aa16.6■□□□□ 0.25
NME3-206ENST00000564252 TRAV12-3A0A0B4J271 114 aa16.59■□□□□ 0.25
NME3-206ENST00000564252 GAGE12BA1L429 117 aa16.59■□□□□ 0.25
NME3-206ENST00000564252 GAGE7O76087 117 aa16.59■□□□□ 0.25
NME3-206ENST00000564252 RLN2P04090 185 aa16.59■□□□□ 0.25
NME3-206ENST00000564252 GAGE12FP0CL80 117 aa16.59■□□□□ 0.25
NME3-206ENST00000564252 GAGE12GP0CL81 117 aa16.59■□□□□ 0.25
NME3-206ENST00000564252 GAGE12IP0CL82 117 aa16.59■□□□□ 0.25
NME3-206ENST00000564252 M6PRP20645 277 aa16.59■□□□□ 0.25
NME3-206ENST00000564252 RPL29P47914 159 aaKnown RBP16.59■□□□□ 0.25
NME3-206ENST00000564252 RXFP4Q8TDU9 374 aa16.59■□□□□ 0.25
NME3-206ENST00000564252 ZNF503Q96F45 646 aa16.59■□□□□ 0.25
NME3-206ENST00000564252 KRTAP4-5Q9BYR2 181 aa16.59■□□□□ 0.25
NME3-206ENST00000564252 NUDT15Q9NV35 164 aa16.59■□□□□ 0.25
NME3-206ENST00000564252 SNURFLB1AK76 121 aa16.58■□□□□ 0.24
NME3-206ENST00000564252 ZNF253O75346 499 aa16.58■□□□□ 0.24
NME3-206ENST00000564252 C12orf45Q8N5I9 185 aaPredicted RBP16.58■□□□□ 0.24
NME3-206ENST00000564252 LYRM2Q9NU23 88 aaPredicted RBP16.58■□□□□ 0.24
NME3-206ENST00000564252 SLC39A9Q9NUM3 307 aa16.58■□□□□ 0.24
NME3-206ENST00000564252 APOBP04114 4563 aaKnown RBP16.57■□□□□ 0.24
NME3-206ENST00000564252 A0A0J9YY99 117 aa16.57■□□□□ 0.24
NME3-206ENST00000564252 UBE2L5PA0A1B0GUS4 154 aa16.57■□□□□ 0.24
NME3-206ENST00000564252 IGSF23A1L1A6 192 aa16.57■□□□□ 0.24
NME3-206ENST00000564252 C16orf90A8MZG2 172 aa16.57■□□□□ 0.24
NME3-206ENST00000564252 PVALBP20472 110 aaPredicted RBP16.57■□□□□ 0.24
NME3-206ENST00000564252 SULT1A1P50225 295 aa16.57■□□□□ 0.24
NME3-206ENST00000564252 BAXQ07812 192 aa16.57■□□□□ 0.24
NME3-206ENST00000564252 IL15RAQ13261 267 aa16.57■□□□□ 0.24
NME3-206ENST00000564252 MRPL53Q96EL3 112 aaKnown RBP16.57■□□□□ 0.24
NME3-206ENST00000564252 PYGO2Q9BRQ0 406 aa16.57■□□□□ 0.24
NME3-206ENST00000564252 Q9H8V8 135 aa16.57■□□□□ 0.24
NME3-206ENST00000564252 TRBV19A0A075B6N1 114 aa16.56■□□□□ 0.24
NME3-206ENST00000564252 S100A11P31949 105 aa16.56■□□□□ 0.24
NME3-206ENST00000564252 S100A10P60903 97 aa16.56■□□□□ 0.24
NME3-206ENST00000564252 DAZ2Q13117 558 aaKnown RBP16.56■□□□□ 0.24
NME3-206ENST00000564252 CHAC2Q8WUX2 184 aa16.56■□□□□ 0.24
NME3-206ENST00000564252 KRTAP1-5Q9BYS1 174 aa16.56■□□□□ 0.24
NME3-206ENST00000564252 M0R3E3 92 aa16.55■□□□□ 0.24
NME3-206ENST00000564252 RAB32Q13637 225 aa16.55■□□□□ 0.24
NME3-206ENST00000564252 TMEM252Q8N6L7 170 aa16.55■□□□□ 0.24
NME3-206ENST00000564252 DNAH5Q8TE73 4624 aa16.55■□□□□ 0.24
NME3-206ENST00000564252 H3BNG1 76 aa16.54■□□□□ 0.24
NME3-206ENST00000564252 NDUFB4O95168 129 aa16.54■□□□□ 0.24
NME3-206ENST00000564252 SLC25A5P05141 298 aaKnown RBP16.54■□□□□ 0.24
NME3-206ENST00000564252 H2AFB2P0C5Z0 115 aa16.54■□□□□ 0.24
NME3-206ENST00000564252 ESRGQ1W209 222 aa16.54■□□□□ 0.24
NME3-206ENST00000564252 Q6ZTI0 123 aa16.54■□□□□ 0.24
NME3-206ENST00000564252 STX12Q86Y82 276 aa16.54■□□□□ 0.24
NME3-206ENST00000564252 UPK3BQ9BT76 320 aa16.54■□□□□ 0.24
NME3-206ENST00000564252 TMPRSS5Q9H3S3 457 aa16.54■□□□□ 0.24
NME3-206ENST00000564252 TMEM14CQ9P0S9 112 aa16.54■□□□□ 0.24
NME3-206ENST00000564252 FGF7P21781 194 aa16.53■□□□□ 0.24
NME3-206ENST00000564252 HBG1P69891 147 aa16.53■□□□□ 0.24
NME3-206ENST00000564252 HBG2P69892 147 aa16.53■□□□□ 0.24
NME3-206ENST00000564252 ERCC8Q13216 396 aa16.53■□□□□ 0.24
NME3-206ENST00000564252 C7orf71A4D174 169 aa16.52■□□□□ 0.24
NME3-206ENST00000564252 CDK2AP2O75956 126 aa16.52■□□□□ 0.24
NME3-206ENST00000564252 HIST1H1EP10412 219 aaKnown RBP16.52■□□□□ 0.24
NME3-206ENST00000564252 TTC32Q5I0X7 151 aa16.52■□□□□ 0.24
NME3-206ENST00000564252 C11orf72Q8NBR9 251 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms