RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 SAV1Q9H4B6 383 aaPredicted RBP14□□□□□ -0.17
SYNGR3-203ENST00000563869 LYSTQ99698 3801 aa13.99□□□□□ -0.17
SYNGR3-203ENST00000563869 OR10J4P0C629 311 aa13.99□□□□□ -0.17
SYNGR3-203ENST00000563869 HLA-DRB4P13762 266 aa13.99□□□□□ -0.17
SYNGR3-203ENST00000563869 DEFB125Q8N687 156 aa13.99□□□□□ -0.17
SYNGR3-203ENST00000563869 FAM213BQ8TBF2 198 aa13.99□□□□□ -0.17
SYNGR3-203ENST00000563869 SUN5Q8TC36 379 aa13.99□□□□□ -0.17
SYNGR3-203ENST00000563869 MBD3L1Q8WWY6 194 aa13.99□□□□□ -0.17
SYNGR3-203ENST00000563869 TCEAL7Q9BRU2 100 aa13.99□□□□□ -0.17
SYNGR3-203ENST00000563869 OTORQ9NRC9 128 aa13.99□□□□□ -0.17
SYNGR3-203ENST00000563869 RFNGQ9Y644 331 aa13.99□□□□□ -0.17
SYNGR3-203ENST00000563869 HLA-DRB4X5D2U9 266 aa13.99□□□□□ -0.17
SYNGR3-203ENST00000563869 SERTM2A0A1B0GWG4 89 aa13.98□□□□□ -0.17
SYNGR3-203ENST00000563869 A0A1W2PRE2 83 aa13.98□□□□□ -0.17
SYNGR3-203ENST00000563869 BLOC1S1P78537 153 aa13.98□□□□□ -0.17
SYNGR3-203ENST00000563869 SBSPONQ8IVN8 264 aa13.98□□□□□ -0.17
SYNGR3-203ENST00000563869 OR10J6PQ8NGY7 276 aa13.98□□□□□ -0.17
SYNGR3-203ENST00000563869 CMTM2Q8TAZ6 248 aa13.98□□□□□ -0.17
SYNGR3-203ENST00000563869 TRAV1-1A0A0B4J248 108 aa13.97□□□□□ -0.17
SYNGR3-203ENST00000563869 FBLL1A6NHQ2 334 aaKnown RBP13.97□□□□□ -0.17
SYNGR3-203ENST00000563869 K7EQM0 130 aa13.97□□□□□ -0.17
SYNGR3-203ENST00000563869 AMBPP02760 352 aa13.97□□□□□ -0.17
SYNGR3-203ENST00000563869 FRMD6-AS1P0C7T7 363 aa13.97□□□□□ -0.17
SYNGR3-203ENST00000563869 TAGLN2P37802 199 aaKnown RBP13.97□□□□□ -0.17
SYNGR3-203ENST00000563869 NKX2-5P52952 324 aaPredicted RBP13.97□□□□□ -0.17
SYNGR3-203ENST00000563869 APRG1Q8IVJ8 170 aa13.97□□□□□ -0.17
SYNGR3-203ENST00000563869 IQCF2Q8IXL9 164 aa13.97□□□□□ -0.17
SYNGR3-203ENST00000563869 FAM24BQ8N5W8 94 aa13.97□□□□□ -0.17
SYNGR3-203ENST00000563869 SFT2D1Q8WV19 159 aa13.97□□□□□ -0.17
SYNGR3-203ENST00000563869 RPUSD4Q96CM3 377 aaKnown RBP13.97□□□□□ -0.17
SYNGR3-203ENST00000563869 TRAV8-2A0A0B4J237 113 aa13.96□□□□□ -0.17
SYNGR3-203ENST00000563869 IFNA7P01567 189 aa13.96□□□□□ -0.17
SYNGR3-203ENST00000563869 ACTL10Q5JWF8 245 aa13.96□□□□□ -0.17
SYNGR3-203ENST00000563869 ZNF503Q96F45 646 aa13.96□□□□□ -0.17
SYNGR3-203ENST00000563869 C17orf77Q96MU5 243 aa13.96□□□□□ -0.17
SYNGR3-203ENST00000563869 TXNDC17Q9BRA2 123 aa13.96□□□□□ -0.17
SYNGR3-203ENST00000563869 Q9H3A6 140 aa13.96□□□□□ -0.17
SYNGR3-203ENST00000563869 A0A0J9YX75 114 aa13.95□□□□□ -0.18
SYNGR3-203ENST00000563869 RBAKDNA6NC62 111 aa13.95□□□□□ -0.18
SYNGR3-203ENST00000563869 NDUFB4O95168 129 aa13.95□□□□□ -0.18
SYNGR3-203ENST00000563869 SLC25A5P05141 298 aaKnown RBP13.95□□□□□ -0.18
SYNGR3-203ENST00000563869 FHITP49789 147 aa13.95□□□□□ -0.18
SYNGR3-203ENST00000563869 RANP62826 216 aaKnown RBP13.95□□□□□ -0.18
SYNGR3-203ENST00000563869 LINC00322Q6ZN03 302 aaPredicted RBP13.95□□□□□ -0.18
SYNGR3-203ENST00000563869 TRPT1Q86TN4 253 aaKnown RBP13.95□□□□□ -0.18
SYNGR3-203ENST00000563869 OR8A1Q8NGG7 326 aa13.95□□□□□ -0.18
SYNGR3-203ENST00000563869 CSTL1Q9H114 145 aa13.95□□□□□ -0.18
SYNGR3-203ENST00000563869 PPP1R14DQ9NXH3 145 aa13.95□□□□□ -0.18
SYNGR3-203ENST00000563869 H3BMM0 161 aa13.94□□□□□ -0.18
SYNGR3-203ENST00000563869 SLC17A3O00476 420 aa13.94□□□□□ -0.18
SYNGR3-203ENST00000563869 HMGB3O15347 200 aaKnown RBP13.94□□□□□ -0.18
SYNGR3-203ENST00000563869 IFNA1P01562 189 aa13.94□□□□□ -0.18
SYNGR3-203ENST00000563869 TSPOP30536 169 aa13.94□□□□□ -0.18
SYNGR3-203ENST00000563869 ICAM4Q14773 271 aa13.94□□□□□ -0.18
SYNGR3-203ENST00000563869 ZNF726P1Q15940 193 aa13.94□□□□□ -0.18
SYNGR3-203ENST00000563869 Q6ZWC4 215 aa13.94□□□□□ -0.18
SYNGR3-203ENST00000563869 C5orf17Q8NAS9 161 aa13.94□□□□□ -0.18
SYNGR3-203ENST00000563869 ODF3Q96PU9 254 aa13.94□□□□□ -0.18
SYNGR3-203ENST00000563869 ZMAT4Q9H898 229 aa13.94□□□□□ -0.18
SYNGR3-203ENST00000563869 MANBALQ9NQG1 85 aa13.94□□□□□ -0.18
SYNGR3-203ENST00000563869 ZNF705EA8MWA4 302 aaPredicted RBP13.93□□□□□ -0.18
SYNGR3-203ENST00000563869 F6UZH7 168 aa13.93□□□□□ -0.18
SYNGR3-203ENST00000563869 RNF182Q8N6D2 247 aa13.93□□□□□ -0.18
SYNGR3-203ENST00000563869 LINC00477Q96M19 166 aa13.93□□□□□ -0.18
SYNGR3-203ENST00000563869 CITED4Q96RK1 184 aa13.93□□□□□ -0.18
SYNGR3-203ENST00000563869 STARD9Q9P2P6 4700 aa13.92□□□□□ -0.18
SYNGR3-203ENST00000563869 TRBV7-9A0A0J9YWB2 115 aa13.92□□□□□ -0.18
SYNGR3-203ENST00000563869 PMS2P11Q13670 270 aa13.92□□□□□ -0.18
SYNGR3-203ENST00000563869 C20orf173Q96LM9 149 aa13.92□□□□□ -0.18
SYNGR3-203ENST00000563869 WFDC10AQ9H1F0 79 aa13.92□□□□□ -0.18
SYNGR3-203ENST00000563869 TP53TG1Q9Y2A0 90 aa13.92□□□□□ -0.18
SYNGR3-203ENST00000563869 CSMD3Q7Z407 3707 aa13.92□□□□□ -0.18
SYNGR3-203ENST00000563869 AGRNO00468 2067 aa13.91□□□□□ -0.18
SYNGR3-203ENST00000563869 RBMY1BA6NDE4 496 aaKnown RBP13.91□□□□□ -0.18
SYNGR3-203ENST00000563869 PGPA6NDG6 321 aa13.91□□□□□ -0.18
SYNGR3-203ENST00000563869 RBMY1EA6NEQ0 496 aaKnown RBP13.91□□□□□ -0.18
SYNGR3-203ENST00000563869 A8MTW9 85 aa13.91□□□□□ -0.18
SYNGR3-203ENST00000563869 H3BTX0 84 aa13.91□□□□□ -0.18
SYNGR3-203ENST00000563869 BOLA2-SMG1P6H3BVE0 249 aa13.91□□□□□ -0.18
SYNGR3-203ENST00000563869 RBMY1DP0C7P1 496 aaKnown RBP13.91□□□□□ -0.18
SYNGR3-203ENST00000563869 TMEM78Q5T7P6 136 aa13.91□□□□□ -0.18
SYNGR3-203ENST00000563869 ALKAL2Q6UX46 152 aa13.91□□□□□ -0.18
SYNGR3-203ENST00000563869 OR4B1Q8NGF8 309 aa13.91□□□□□ -0.18
SYNGR3-203ENST00000563869 SPATA25Q9BR10 227 aa13.91□□□□□ -0.18
SYNGR3-203ENST00000563869 LENEPQ9Y5L5 61 aa13.91□□□□□ -0.18
SYNGR3-203ENST00000563869 KNCNA6PVL3 124 aa13.9□□□□□ -0.18
SYNGR3-203ENST00000563869 NMBP08949 121 aa13.9□□□□□ -0.18
SYNGR3-203ENST00000563869 CNN1P51911 297 aaKnown RBP13.9□□□□□ -0.18
SYNGR3-203ENST00000563869 HIST1H1AQ02539 215 aaPredicted RBP13.9□□□□□ -0.18
SYNGR3-203ENST00000563869 ZFAND6Q6FIF0 208 aa13.9□□□□□ -0.18
SYNGR3-203ENST00000563869 TEX261Q6UWH6 196 aa13.9□□□□□ -0.18
SYNGR3-203ENST00000563869 EXOC3-AS1Q8N2X6 119 aa13.9□□□□□ -0.18
SYNGR3-203ENST00000563869 HIST1H2BAQ96A08 127 aa13.9□□□□□ -0.18
SYNGR3-203ENST00000563869 SNRPCP09234 159 aaKnown RBP13.89□□□□□ -0.19
SYNGR3-203ENST00000563869 RPL35AP18077 110 aaKnown RBP13.89□□□□□ -0.19
SYNGR3-203ENST00000563869 FGF8P55075 233 aaPredicted RBP13.89□□□□□ -0.19
SYNGR3-203ENST00000563869 HAGHQ16775 308 aa13.89□□□□□ -0.19
SYNGR3-203ENST00000563869 C9orf47Q6ZRZ4 202 aa13.89□□□□□ -0.19
SYNGR3-203ENST00000563869 SSX7Q7RTT5 188 aa13.89□□□□□ -0.19
SYNGR3-203ENST00000563869 NPIPB6E9PJ23 425 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms