RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 A0A1W2PRX2 142 aa10.84□□□□□ -0.67
COMMD4-205ENST00000562310 DIRC3C9JPN6 131 aa10.84□□□□□ -0.67
COMMD4-205ENST00000562310 CCL24O00175 119 aa10.84□□□□□ -0.67
COMMD4-205ENST00000562310 CBLN1P23435 193 aa10.84□□□□□ -0.67
COMMD4-205ENST00000562310 GOLT1AQ6ZVE7 132 aa10.84□□□□□ -0.67
COMMD4-205ENST00000562310 TCF24Q7RTU0 167 aa10.84□□□□□ -0.67
COMMD4-205ENST00000562310 OR9G4Q8NGQ1 327 aa10.84□□□□□ -0.67
COMMD4-205ENST00000562310 ISLRO14498 428 aa10.83□□□□□ -0.68
COMMD4-205ENST00000562310 TSPAN4O14817 238 aa10.83□□□□□ -0.68
COMMD4-205ENST00000562310 SCO1O75880 301 aa10.83□□□□□ -0.68
COMMD4-205ENST00000562310 MT-ND4LP03901 98 aa10.83□□□□□ -0.68
COMMD4-205ENST00000562310 FOLR2P14207 255 aa10.83□□□□□ -0.68
COMMD4-205ENST00000562310 RPL11P62913 178 aaKnown RBP10.83□□□□□ -0.68
COMMD4-205ENST00000562310 C16orf92Q96LL3 132 aa10.83□□□□□ -0.68
COMMD4-205ENST00000562310 CTDSP1Q9GZU7 261 aa10.83□□□□□ -0.68
COMMD4-205ENST00000562310 RBAKDNA6NC62 111 aa10.82□□□□□ -0.68
COMMD4-205ENST00000562310 M0R3E3 92 aa10.82□□□□□ -0.68
COMMD4-205ENST00000562310 SOCS3O14543 225 aa10.82□□□□□ -0.68
COMMD4-205ENST00000562310 PPP1R2P9O14990 202 aa10.82□□□□□ -0.68
COMMD4-205ENST00000562310 ID1P41134 155 aa10.82□□□□□ -0.68
COMMD4-205ENST00000562310 SRSF2Q01130 221 aaKnown RBP10.82□□□□□ -0.68
COMMD4-205ENST00000562310 Q86TA4 180 aa10.82□□□□□ -0.68
COMMD4-205ENST00000562310 BAGE2Q86Y30 109 aa10.82□□□□□ -0.68
COMMD4-205ENST00000562310 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.82□□□□□ -0.68
COMMD4-205ENST00000562310 DLX4Q92988 240 aaPredicted RBP10.82□□□□□ -0.68
COMMD4-205ENST00000562310 ISOC2Q96AB3 205 aa10.82□□□□□ -0.68
COMMD4-205ENST00000562310 ANAPC16Q96DE5 110 aa10.82□□□□□ -0.68
COMMD4-205ENST00000562310 BIN3Q9NQY0 253 aa10.82□□□□□ -0.68
COMMD4-205ENST00000562310 SMCO4Q9NRQ5 59 aa10.82□□□□□ -0.68
COMMD4-205ENST00000562310 MLXQ9UH92 298 aa10.82□□□□□ -0.68
COMMD4-205ENST00000562310 TRAV8-2A0A0B4J237 113 aa10.81□□□□□ -0.68
COMMD4-205ENST00000562310 TRAV34A0A0B4J273 112 aa10.81□□□□□ -0.68
COMMD4-205ENST00000562310 ADARB2-AS1A8MUL3 147 aa10.81□□□□□ -0.68
COMMD4-205ENST00000562310 LTAP01374 205 aa10.81□□□□□ -0.68
COMMD4-205ENST00000562310 FLI1Q01543 452 aaPredicted RBP10.81□□□□□ -0.68
COMMD4-205ENST00000562310 PSG3Q16557 428 aa10.81□□□□□ -0.68
COMMD4-205ENST00000562310 LCN12Q6JVE5 192 aa10.81□□□□□ -0.68
COMMD4-205ENST00000562310 OCC1Q8TAD7 63 aa10.81□□□□□ -0.68
COMMD4-205ENST00000562310 LINC00479Q96M42 142 aa10.81□□□□□ -0.68
COMMD4-205ENST00000562310 DUX3Q96PT4 197 aa10.81□□□□□ -0.68
COMMD4-205ENST00000562310 TMEM242Q9NWH2 141 aa10.81□□□□□ -0.68
COMMD4-205ENST00000562310 TRAV2A0A0B4J234 112 aa10.8□□□□□ -0.68
COMMD4-205ENST00000562310 CXorf65A6NEN9 183 aa10.8□□□□□ -0.68
COMMD4-205ENST00000562310 PGPEP1LA6NFU8 196 aa10.8□□□□□ -0.68
COMMD4-205ENST00000562310 EDN2P20800 178 aa10.8□□□□□ -0.68
COMMD4-205ENST00000562310 BTN1A1Q13410 526 aa10.8□□□□□ -0.68
COMMD4-205ENST00000562310 DYNLRB2Q8TF09 96 aa10.8□□□□□ -0.68
COMMD4-205ENST00000562310 TUBA4BQ9H853 241 aa10.8□□□□□ -0.68
COMMD4-205ENST00000562310 SIGLEC8Q9NYZ4 499 aa10.8□□□□□ -0.68
COMMD4-205ENST00000562310 ZFP30Q9Y2G7 519 aa10.8□□□□□ -0.68
COMMD4-205ENST00000562310 H7BYZ3 331 aa10.79□□□□□ -0.68
COMMD4-205ENST00000562310 OVOL1O14753 267 aa10.79□□□□□ -0.68
COMMD4-205ENST00000562310 GCGP01275 180 aa10.79□□□□□ -0.68
COMMD4-205ENST00000562310 IGLV2-11P01706 119 aa10.79□□□□□ -0.68
COMMD4-205ENST00000562310 CSN3P07498 182 aa10.79□□□□□ -0.68
COMMD4-205ENST00000562310 HLA-DMBP28068 263 aa10.79□□□□□ -0.68
COMMD4-205ENST00000562310 PAFAH1B2P68402 229 aa10.79□□□□□ -0.68
COMMD4-205ENST00000562310 RNF212Q495C1 297 aa10.79□□□□□ -0.68
COMMD4-205ENST00000562310 RNF182Q8N6D2 247 aa10.79□□□□□ -0.68
COMMD4-205ENST00000562310 ZNF738Q8NE65 137 aa10.79□□□□□ -0.68
COMMD4-205ENST00000562310 SFRP2Q96HF1 295 aa10.79□□□□□ -0.68
COMMD4-205ENST00000562310 PSG8Q9UQ74 426 aa10.79□□□□□ -0.68
COMMD4-205ENST00000562310 K7EN84 100 aa10.78□□□□□ -0.68
COMMD4-205ENST00000562310 DNASE2O00115 360 aaPredicted RBP10.78□□□□□ -0.68
COMMD4-205ENST00000562310 IGLV2-8P01709 118 aa10.78□□□□□ -0.68
COMMD4-205ENST00000562310 MGST1P10620 155 aaKnown RBP10.78□□□□□ -0.68
COMMD4-205ENST00000562310 KRTAP10-3P60369 221 aa10.78□□□□□ -0.68
COMMD4-205ENST00000562310 NSUN5P1Q3KNT7 163 aa10.78□□□□□ -0.68
COMMD4-205ENST00000562310 SAPCD1Q5SSQ6 148 aa10.78□□□□□ -0.68
COMMD4-205ENST00000562310 IGFL4Q6B9Z1 124 aa10.78□□□□□ -0.68
COMMD4-205ENST00000562310 TMEM88Q6PEY1 159 aa10.78□□□□□ -0.68
COMMD4-205ENST00000562310 ADAMTSL5Q6ZMM2 481 aa10.78□□□□□ -0.68
COMMD4-205ENST00000562310 PRNTQ86SH4 94 aa10.78□□□□□ -0.68
COMMD4-205ENST00000562310 CBLN2Q8IUK8 224 aa10.78□□□□□ -0.68
COMMD4-205ENST00000562310 TMEM183AQ8IXX5 376 aa10.78□□□□□ -0.68
COMMD4-205ENST00000562310 C15orf54Q8N8G6 183 aa10.78□□□□□ -0.68
COMMD4-205ENST00000562310 DCANP1Q8TF63 244 aa10.78□□□□□ -0.68
COMMD4-205ENST00000562310 NDFIP1Q9BT67 221 aa10.78□□□□□ -0.68
COMMD4-205ENST00000562310 MS4A6AQ9H2W1 248 aa10.78□□□□□ -0.68
COMMD4-205ENST00000562310 IGKV2-40A0A087WW87 121 aaPredicted RBP10.77□□□□□ -0.69
COMMD4-205ENST00000562310 TRAV8-1A0A0A6YYK1 113 aa10.77□□□□□ -0.69
COMMD4-205ENST00000562310 TRAV25A0A0B4J276 109 aa10.77□□□□□ -0.69
COMMD4-205ENST00000562310 K7EQG2 157 aa10.77□□□□□ -0.69
COMMD4-205ENST00000562310 IGKV2D-40P01614 121 aaPredicted RBP10.77□□□□□ -0.69
COMMD4-205ENST00000562310 SNRPD3P62318 126 aaKnown RBP10.77□□□□□ -0.69
COMMD4-205ENST00000562310 HIST2H2BDQ6DRA6 164 aa10.77□□□□□ -0.69
COMMD4-205ENST00000562310 FAM231DQ6ZW35 169 aa10.77□□□□□ -0.69
COMMD4-205ENST00000562310 OR10G8Q8NGN5 311 aa10.77□□□□□ -0.69
COMMD4-205ENST00000562310 MLST8Q9BVC4 326 aa10.77□□□□□ -0.69
COMMD4-205ENST00000562310 OSTCQ9NRP0 149 aa10.77□□□□□ -0.69
COMMD4-205ENST00000562310 AURKAIP1Q9NWT8 199 aaPredicted RBP10.77□□□□□ -0.69
COMMD4-205ENST00000562310 ZNF492Q9P255 531 aa10.77□□□□□ -0.69
COMMD4-205ENST00000562310 IGKV3-7A0A075B6H7 116 aa10.76□□□□□ -0.69
COMMD4-205ENST00000562310 ZNF705FA8MVS1 300 aaPredicted RBP10.76□□□□□ -0.69
COMMD4-205ENST00000562310 ERVFC1-1P60608 527 aa10.76□□□□□ -0.69
COMMD4-205ENST00000562310 TMEM78Q5T7P6 136 aa10.76□□□□□ -0.69
COMMD4-205ENST00000562310 RBPMS2Q6ZRY4 209 aaKnown RBP10.76□□□□□ -0.69
COMMD4-205ENST00000562310 NHLRC2Q8NBF2 726 aa10.76□□□□□ -0.69
COMMD4-205ENST00000562310 SGK494Q96LW2 274 aa10.76□□□□□ -0.69
COMMD4-205ENST00000562310 PF4P02776 101 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms