RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 CNIH2Q6PI25 160 aa3.53□□□□□ -1.84
UBR1-203ENST00000562173 SCXQ7RTU7 201 aa3.53□□□□□ -1.84
UBR1-203ENST00000562173 OR11H7Q8NGC8 314 aa3.53□□□□□ -1.84
UBR1-203ENST00000562173 TMEM230Q96A57 120 aa3.53□□□□□ -1.84
UBR1-203ENST00000562173 FAM210BQ96KR6 192 aa3.53□□□□□ -1.84
UBR1-203ENST00000562173 DNAJC30Q96LL9 226 aa3.53□□□□□ -1.84
UBR1-203ENST00000562173 METTL26Q96S19 204 aa3.53□□□□□ -1.84
UBR1-203ENST00000562173 GINS3Q9BRX5 216 aa3.53□□□□□ -1.84
UBR1-203ENST00000562173 MRPS16Q9Y3D3 137 aaKnown RBP3.53□□□□□ -1.84
UBR1-203ENST00000562173 TRAV9-2A0A087WT02 112 aa3.52□□□□□ -1.85
UBR1-203ENST00000562173 SERTM2A0A1B0GWG4 89 aa3.52□□□□□ -1.85
UBR1-203ENST00000562173 IFITM5A6NNB3 132 aa3.52□□□□□ -1.85
UBR1-203ENST00000562173 IGHV3-53P01767 116 aa3.52□□□□□ -1.85
UBR1-203ENST00000562173 IL4P05112 153 aa3.52□□□□□ -1.85
UBR1-203ENST00000562173 DTYMKP23919 212 aa3.52□□□□□ -1.85
UBR1-203ENST00000562173 PSMA1P25786 263 aaKnown RBP3.52□□□□□ -1.85
UBR1-203ENST00000562173 PSG9Q00887 426 aa3.52□□□□□ -1.85
UBR1-203ENST00000562173 ZNF90Q03938 601 aa3.52□□□□□ -1.85
UBR1-203ENST00000562173 OR2F1Q13607 317 aa3.52□□□□□ -1.85
UBR1-203ENST00000562173 OGFRL1Q5TC84 451 aaPredicted RBP3.52□□□□□ -1.85
UBR1-203ENST00000562173 C22orf42Q6IC83 251 aa3.52□□□□□ -1.85
UBR1-203ENST00000562173 PRSS54Q6PEW0 395 aa3.52□□□□□ -1.85
UBR1-203ENST00000562173 ATRAIDQ6UW56 229 aa3.52□□□□□ -1.85
UBR1-203ENST00000562173 TMEM37Q8WXS4 190 aa3.52□□□□□ -1.85
UBR1-203ENST00000562173 GNPNAT1Q96EK6 184 aaPredicted RBP3.52□□□□□ -1.85
UBR1-203ENST00000562173 PBDC1Q9BVG4 233 aa3.52□□□□□ -1.85
UBR1-203ENST00000562173 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
UBR1-203ENST00000562173 NRN1Q9NPD7 142 aa3.52□□□□□ -1.85
UBR1-203ENST00000562173 IGKV1D-37A0A075B6S9 117 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 SMIM9A6NGZ8 99 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 RBFOX2O43251 390 aaKnown RBP eCLIP3.51□□□□□ -1.85
UBR1-203ENST00000562173 ATP5G1P05496 136 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 STAG3L3P0CL85 134 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 F2RP25116 425 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 OPRK1P41145 380 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 ATP5G3P48201 142 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 GNG2P59768 71 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 ARPC4P59998 168 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 IL18Q14116 193 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 SP6Q3SY56 376 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 LELP1Q5T871 98 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 Q6ZTI0 123 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 TMED4Q7Z7H5 227 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 IQCF2Q8IXL9 164 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 ZNF555Q8NEP9 628 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 LHFPL5Q8TAF8 219 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 RXFP4Q8TDU9 374 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 BCL7BQ9BQE9 202 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 ZNF2Q9BSG1 426 aaPredicted RBP3.51□□□□□ -1.85
UBR1-203ENST00000562173 UPK3BQ9BT76 320 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 TMEM208Q9BTX3 173 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 C9orf16Q9BUW7 83 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 COMMD9Q9P000 198 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 DHRS4-AS1Q9P1J3 65 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 GOLT1BQ9Y3E0 138 aa3.51□□□□□ -1.85
UBR1-203ENST00000562173 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.5□□□□□ -1.85
UBR1-203ENST00000562173 LOC100131303A0A0U1RQF7 123 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 LINC00854A0A1B0GVQ3 168 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 TMEM189A5PLL7 270 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 A8MTW9 85 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 A8MU10 97 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 H3BTX0 84 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 WRBO00258 174 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 SNAPC5O75971 98 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 IFNA5P01569 189 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 S100A9P06702 114 aaKnown RBP3.5□□□□□ -1.85
UBR1-203ENST00000562173 GADD45AP24522 165 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 HSPE1P61604 102 aaKnown RBP3.5□□□□□ -1.85
UBR1-203ENST00000562173 MXD1Q05195 221 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 CATR1Q13166 79 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 KRTAP5-4Q6L8H1 288 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 FOXI2Q6ZQN5 318 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 OR4C16Q8NGL9 310 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 UFD1Q92890 307 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 ACY3Q96HD9 319 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 IGF2BP2-AS1Q96M15 143 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 C9orf85Q96MD7 179 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 TP53RKQ96S44 253 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 EHFQ9NZC4 300 aa3.5□□□□□ -1.85
UBR1-203ENST00000562173 LYRM9A8MSI8 78 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 SIVA1O15304 175 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 SCGNO76038 276 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 KRTAP1-4P0C5Y4 121 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 RAB3BP20337 219 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 HLA-DMAP28067 261 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 OR10J1P30954 320 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 FGL1Q08830 312 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 TPRA1Q86W33 373 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 MS4A15Q8N5U1 240 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 OR4X1Q8NH49 305 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 COQ8AQ8NI60 647 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 GTSF1Q8WW33 167 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 TMEM56Q96MV1 263 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 LINC01587Q99440 93 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 PAXXQ9BUH6 204 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 MND1Q9BWT6 205 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 PRNDQ9UKY0 176 aa3.49□□□□□ -1.85
UBR1-203ENST00000562173 FAT4Q6V0I7 4981 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 IGKV1OR2-108A0A075B7D4 117 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms