RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 CAMLGP49069 296 aa18.9■□□□□ 0.62
SNRPA1-215ENST00000561187 CCL18P55774 89 aa18.9■□□□□ 0.62
SNRPA1-215ENST00000561187 SEC22CQ9BRL7 303 aa18.9■□□□□ 0.62
SNRPA1-215ENST00000561187 A0A0J9YY99 117 aa18.89■□□□□ 0.61
SNRPA1-215ENST00000561187 NRARPQ7Z6K4 114 aa18.89■□□□□ 0.61
SNRPA1-215ENST00000561187 GGACTQ9BVM4 153 aa18.89■□□□□ 0.61
SNRPA1-215ENST00000561187 LRP1BQ9NZR2 4599 aa18.88■□□□□ 0.61
SNRPA1-215ENST00000561187 GAGE12BA1L429 117 aa18.88■□□□□ 0.61
SNRPA1-215ENST00000561187 C5orf51A6NDU8 294 aa18.88■□□□□ 0.61
SNRPA1-215ENST00000561187 FAM24AA6NFZ4 105 aa18.88■□□□□ 0.61
SNRPA1-215ENST00000561187 GAGE7O76087 117 aa18.88■□□□□ 0.61
SNRPA1-215ENST00000561187 GAGE12FP0CL80 117 aa18.88■□□□□ 0.61
SNRPA1-215ENST00000561187 GAGE12GP0CL81 117 aa18.88■□□□□ 0.61
SNRPA1-215ENST00000561187 GAGE12IP0CL82 117 aa18.88■□□□□ 0.61
SNRPA1-215ENST00000561187 IGLC2P0DOY2 106 aa18.88■□□□□ 0.61
SNRPA1-215ENST00000561187 ZNF493Q6ZR52 646 aa18.88■□□□□ 0.61
SNRPA1-215ENST00000561187 C6orf223Q8N319 242 aa18.88■□□□□ 0.61
SNRPA1-215ENST00000561187 UBE2L5PA0A1B0GUS4 154 aa18.87■□□□□ 0.61
SNRPA1-215ENST00000561187 PLA2G10O15496 165 aa18.87■□□□□ 0.61
SNRPA1-215ENST00000561187 S100A10P60903 97 aa18.87■□□□□ 0.61
SNRPA1-215ENST00000561187 SSX7Q7RTT5 188 aa18.87■□□□□ 0.61
SNRPA1-215ENST00000561187 TRAV26-1A0A087WT03 109 aa18.86■□□□□ 0.61
SNRPA1-215ENST00000561187 TRAV12-3A0A0B4J271 114 aa18.86■□□□□ 0.61
SNRPA1-215ENST00000561187 C16orf90A8MZG2 172 aa18.86■□□□□ 0.61
SNRPA1-215ENST00000561187 LYRM1O43325 122 aa18.86■□□□□ 0.61
SNRPA1-215ENST00000561187 CCDC28AQ8IWP9 274 aa18.86■□□□□ 0.61
SNRPA1-215ENST00000561187 PXMP4Q9Y6I8 212 aa18.86■□□□□ 0.61
SNRPA1-215ENST00000561187 CT45A10P0DMU9 189 aa18.85■□□□□ 0.61
SNRPA1-215ENST00000561187 Q6ZRG5 221 aa18.85■□□□□ 0.61
SNRPA1-215ENST00000561187 GNPNAT1Q96EK6 184 aaPredicted RBP18.85■□□□□ 0.61
SNRPA1-215ENST00000561187 KRTAP4-5Q9BYR2 181 aa18.85■□□□□ 0.61
SNRPA1-215ENST00000561187 NUDT15Q9NV35 164 aa18.85■□□□□ 0.61
SNRPA1-215ENST00000561187 UQCC1Q9NVA1 299 aa18.85■□□□□ 0.61
SNRPA1-215ENST00000561187 BAXQ07812 192 aa18.84■□□□□ 0.61
SNRPA1-215ENST00000561187 SAT2Q96F10 170 aaPredicted RBP18.84■□□□□ 0.61
SNRPA1-215ENST00000561187 DNAJC4Q9NNZ3 241 aa18.84■□□□□ 0.61
SNRPA1-215ENST00000561187 SNURFLB1AK76 121 aa18.83■□□□□ 0.6
SNRPA1-215ENST00000561187 RLN2P04090 185 aa18.83■□□□□ 0.6
SNRPA1-215ENST00000561187 TCRBP04435 133 aa18.83■□□□□ 0.6
SNRPA1-215ENST00000561187 HOXA5P20719 270 aa18.83■□□□□ 0.6
SNRPA1-215ENST00000561187 RAB31Q13636 194 aa18.83■□□□□ 0.6
SNRPA1-215ENST00000561187 C20orf144Q9BQM9 153 aa18.83■□□□□ 0.6
SNRPA1-215ENST00000561187 ZNF586Q9NXT0 402 aa18.83■□□□□ 0.6
SNRPA1-215ENST00000561187 ZNF431Q8TF32 576 aaPredicted RBP18.82■□□□□ 0.6
SNRPA1-215ENST00000561187 C11orf1Q9H5F2 150 aa18.82■□□□□ 0.6
SNRPA1-215ENST00000561187 WDR83OSQ9Y284 106 aa18.82■□□□□ 0.6
SNRPA1-215ENST00000561187 IGSF23A1L1A6 192 aa18.81■□□□□ 0.6
SNRPA1-215ENST00000561187 M0R3E3 92 aa18.81■□□□□ 0.6
SNRPA1-215ENST00000561187 M6PRP20645 277 aa18.81■□□□□ 0.6
SNRPA1-215ENST00000561187 LEPP41159 167 aa18.81■□□□□ 0.6
SNRPA1-215ENST00000561187 ERCC8Q13216 396 aa18.81■□□□□ 0.6
SNRPA1-215ENST00000561187 CNPY1Q3B7I2 92 aa18.81■□□□□ 0.6
SNRPA1-215ENST00000561187 OR1L4Q8NGR5 311 aa18.81■□□□□ 0.6
SNRPA1-215ENST00000561187 TMPRSS5Q9H3S3 457 aa18.81■□□□□ 0.6
SNRPA1-215ENST00000561187 NPIPB6E9PJ23 425 aa18.8■□□□□ 0.6
SNRPA1-215ENST00000561187 C12orf45Q8N5I9 185 aaPredicted RBP18.8■□□□□ 0.6
SNRPA1-215ENST00000561187 LINC00612Q8N6U2 182 aa18.8■□□□□ 0.6
SNRPA1-215ENST00000561187 KRTAP1-5Q9BYS1 174 aa18.8■□□□□ 0.6
SNRPA1-215ENST00000561187 SLC39A9Q9NUM3 307 aa18.8■□□□□ 0.6
SNRPA1-215ENST00000561187 PVALBP20472 110 aaPredicted RBP18.79■□□□□ 0.6
SNRPA1-215ENST00000561187 FGF7P21781 194 aa18.79■□□□□ 0.6
SNRPA1-215ENST00000561187 Q6ZTI0 123 aa18.79■□□□□ 0.6
SNRPA1-215ENST00000561187 C2orf50Q96LR7 162 aa18.79■□□□□ 0.6
SNRPA1-215ENST00000561187 PFDN5Q99471 154 aa18.79■□□□□ 0.6
SNRPA1-215ENST00000561187 Q9H8V8 135 aa18.79■□□□□ 0.6
SNRPA1-215ENST00000561187 RAB32Q13637 225 aa18.78■□□□□ 0.6
SNRPA1-215ENST00000561187 RXFP4Q8TDU9 374 aa18.78■□□□□ 0.6
SNRPA1-215ENST00000561187 PYYP10082 97 aa18.77■□□□□ 0.6
SNRPA1-215ENST00000561187 SULT1A1P50225 295 aa18.77■□□□□ 0.6
SNRPA1-215ENST00000561187 GUK1Q16774 197 aa18.77■□□□□ 0.6
SNRPA1-215ENST00000561187 BLNKQ8WV28 456 aa18.77■□□□□ 0.6
SNRPA1-215ENST00000561187 LYRM2Q9NU23 88 aaPredicted RBP18.77■□□□□ 0.6
SNRPA1-215ENST00000561187 BTN1A1Q13410 526 aa18.76■□□□□ 0.59
SNRPA1-215ENST00000561187 VWC2Q2TAL6 325 aa18.76■□□□□ 0.59
SNRPA1-215ENST00000561187 GCSAMLQ5JQS6 135 aa18.76■□□□□ 0.59
SNRPA1-215ENST00000561187 STX12Q86Y82 276 aa18.76■□□□□ 0.59
SNRPA1-215ENST00000561187 TMEM252Q8N6L7 170 aa18.76■□□□□ 0.59
SNRPA1-215ENST00000561187 GPN1Q9HCN4 374 aaPredicted RBP18.76■□□□□ 0.59
SNRPA1-215ENST00000561187 TRBV19A0A075B6N1 114 aa18.75■□□□□ 0.59
SNRPA1-215ENST00000561187 H2AFB2P0C5Z0 115 aa18.75■□□□□ 0.59
SNRPA1-215ENST00000561187 RPL29P47914 159 aaKnown RBP18.75■□□□□ 0.59
SNRPA1-215ENST00000561187 EXOC3-AS1Q8N2X6 119 aa18.75■□□□□ 0.59
SNRPA1-215ENST00000561187 ODF3Q96PU9 254 aa18.75■□□□□ 0.59
SNRPA1-215ENST00000561187 PYGO2Q9BRQ0 406 aa18.75■□□□□ 0.59
SNRPA1-215ENST00000561187 GSN-AS1Q9NRJ2 163 aa18.75■□□□□ 0.59
SNRPA1-215ENST00000561187 C7orf71A4D174 169 aa18.74■□□□□ 0.59
SNRPA1-215ENST00000561187 ESRGQ1W209 222 aa18.74■□□□□ 0.59
SNRPA1-215ENST00000561187 TIMM9Q9Y5J7 89 aa18.74■□□□□ 0.59
SNRPA1-215ENST00000561187 APOBP04114 4563 aaKnown RBP18.74■□□□□ 0.59
SNRPA1-215ENST00000561187 NDUFB4O95168 129 aa18.73■□□□□ 0.59
SNRPA1-215ENST00000561187 S100A11P31949 105 aa18.73■□□□□ 0.59
SNRPA1-215ENST00000561187 HBG1P69891 147 aa18.73■□□□□ 0.59
SNRPA1-215ENST00000561187 HBG2P69892 147 aa18.73■□□□□ 0.59
SNRPA1-215ENST00000561187 CD300CQ08708 224 aa18.73■□□□□ 0.59
SNRPA1-215ENST00000561187 TRGV2A0A075B6R0 118 aa18.72■□□□□ 0.59
SNRPA1-215ENST00000561187 TRGV1A0A0A0MS02 117 aa18.72■□□□□ 0.59
SNRPA1-215ENST00000561187 RNASE4P34096 147 aaKnown RBP18.72■□□□□ 0.59
SNRPA1-215ENST00000561187 SPATA12Q7Z6I5 190 aa18.72■□□□□ 0.59
SNRPA1-215ENST00000561187 THAP6Q8TBB0 222 aa18.72■□□□□ 0.59
SNRPA1-215ENST00000561187 DNAH5Q8TE73 4624 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms