RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 FAM240BA0A1B0GVZ2 78 aa7.84□□□□□ -1.15
GABPB1-210ENST00000560825 A6NHS1 94 aa7.84□□□□□ -1.15
GABPB1-210ENST00000560825 NDUFB4O95168 129 aa7.84□□□□□ -1.15
GABPB1-210ENST00000560825 P0DMU3 169 aa7.84□□□□□ -1.15
GABPB1-210ENST00000560825 FAM231AP0DMU4 169 aa7.84□□□□□ -1.15
GABPB1-210ENST00000560825 FAM231CP0DMU5 169 aa7.84□□□□□ -1.15
GABPB1-210ENST00000560825 ERCC8Q13216 396 aa7.84□□□□□ -1.15
GABPB1-210ENST00000560825 ASAH1Q13510 395 aa7.84□□□□□ -1.15
GABPB1-210ENST00000560825 ZNF846Q147U1 533 aa7.84□□□□□ -1.15
GABPB1-210ENST00000560825 GFI1BQ5VTD9 330 aa7.84□□□□□ -1.15
GABPB1-210ENST00000560825 SAMD13Q5VXD3 122 aa7.84□□□□□ -1.15
GABPB1-210ENST00000560825 LRRC20Q8TCA0 184 aa7.84□□□□□ -1.15
GABPB1-210ENST00000560825 LINC01587Q99440 93 aa7.84□□□□□ -1.15
GABPB1-210ENST00000560825 UQCC1Q9NVA1 299 aa7.84□□□□□ -1.15
GABPB1-210ENST00000560825 NDUFA13Q9P0J0 144 aa7.84□□□□□ -1.15
GABPB1-210ENST00000560825 EIF3GO75821 320 aaKnown RBP eCLIP7.83□□□□□ -1.16
GABPB1-210ENST00000560825 SULT1A1P50225 295 aa7.83□□□□□ -1.16
GABPB1-210ENST00000560825 LCN15Q6UWW0 184 aa7.83□□□□□ -1.16
GABPB1-210ENST00000560825 BPIFA4PQ86YQ2 179 aa7.83□□□□□ -1.16
GABPB1-210ENST00000560825 THAP6Q8TBB0 222 aa7.83□□□□□ -1.16
GABPB1-210ENST00000560825 RNASE8Q8TDE3 154 aaKnown RBP7.83□□□□□ -1.16
GABPB1-210ENST00000560825 KRTAP9-2Q9BYQ4 174 aa7.83□□□□□ -1.16
GABPB1-210ENST00000560825 DNAJC4Q9NNZ3 241 aa7.83□□□□□ -1.16
GABPB1-210ENST00000560825 PXMP4Q9Y6I8 212 aa7.83□□□□□ -1.16
GABPB1-210ENST00000560825 DNAH5Q8TE73 4624 aa7.82□□□□□ -1.16
GABPB1-210ENST00000560825 UPK1BO75841 260 aa7.82□□□□□ -1.16
GABPB1-210ENST00000560825 HOXA5P20719 270 aa7.82□□□□□ -1.16
GABPB1-210ENST00000560825 FGF7P21781 194 aa7.82□□□□□ -1.16
GABPB1-210ENST00000560825 TSPOP30536 169 aa7.82□□□□□ -1.16
GABPB1-210ENST00000560825 CDKN1BP46527 198 aa7.82□□□□□ -1.16
GABPB1-210ENST00000560825 H2BFSP57053 126 aa7.82□□□□□ -1.16
GABPB1-210ENST00000560825 BAXQ07812 192 aa7.82□□□□□ -1.16
GABPB1-210ENST00000560825 LRRC37A5PQ49AS3 106 aa7.82□□□□□ -1.16
GABPB1-210ENST00000560825 PRR9Q5T870 116 aa7.82□□□□□ -1.16
GABPB1-210ENST00000560825 PXDC1Q5TGL8 231 aa7.82□□□□□ -1.16
GABPB1-210ENST00000560825 EXOC3-AS1Q8N2X6 119 aa7.82□□□□□ -1.16
GABPB1-210ENST00000560825 SLC25A2Q9BXI2 301 aa7.82□□□□□ -1.16
GABPB1-210ENST00000560825 NOP10Q9NPE3 64 aaKnown RBP7.82□□□□□ -1.16
GABPB1-210ENST00000560825 SLC39A9Q9NUM3 307 aa7.82□□□□□ -1.16
GABPB1-210ENST00000560825 HSPG2P98160 4391 aa7.81□□□□□ -1.16
GABPB1-210ENST00000560825 TRAV12-3A0A0B4J271 114 aa7.81□□□□□ -1.16
GABPB1-210ENST00000560825 PRSS29PA6NIE9 313 aa7.81□□□□□ -1.16
GABPB1-210ENST00000560825 NPIPB6E9PJ23 425 aa7.81□□□□□ -1.16
GABPB1-210ENST00000560825 RPL29P47914 159 aaKnown RBP7.81□□□□□ -1.16
GABPB1-210ENST00000560825 B2MP61769 119 aa7.81□□□□□ -1.16
GABPB1-210ENST00000560825 MIR17HGQ75NE6 70 aa7.81□□□□□ -1.16
GABPB1-210ENST00000560825 FAM167A-AS1Q96KT0 104 aa7.81□□□□□ -1.16
GABPB1-210ENST00000560825 NPCDR1Q9BY65 106 aa7.81□□□□□ -1.16
GABPB1-210ENST00000560825 GPN1Q9HCN4 374 aaPredicted RBP7.81□□□□□ -1.16
GABPB1-210ENST00000560825 LRP1BQ9NZR2 4599 aa7.81□□□□□ -1.16
GABPB1-210ENST00000560825 TRBV19A0A075B6N1 114 aa7.8□□□□□ -1.16
GABPB1-210ENST00000560825 LYRM9A8MSI8 78 aa7.8□□□□□ -1.16
GABPB1-210ENST00000560825 F5H768 121 aa7.8□□□□□ -1.16
GABPB1-210ENST00000560825 CXCL2P19875 107 aa7.8□□□□□ -1.16
GABPB1-210ENST00000560825 TAS2R60P59551 318 aa7.8□□□□□ -1.16
GABPB1-210ENST00000560825 CD300CQ08708 224 aa7.8□□□□□ -1.16
GABPB1-210ENST00000560825 LGALS9BQ3B8N2 356 aa7.8□□□□□ -1.16
GABPB1-210ENST00000560825 UBE2DNLQ8IWF7 75 aa7.8□□□□□ -1.16
GABPB1-210ENST00000560825 OR5C1Q8NGR4 320 aa7.8□□□□□ -1.16
GABPB1-210ENST00000560825 RNF141Q8WVD5 230 aa7.8□□□□□ -1.16
GABPB1-210ENST00000560825 SLC50A1Q9BRV3 221 aa7.8□□□□□ -1.16
GABPB1-210ENST00000560825 KRTAP9-6A0A140TA67 174 aa7.79□□□□□ -1.16
GABPB1-210ENST00000560825 TEX48A0A1B0GUV7 120 aa7.79□□□□□ -1.16
GABPB1-210ENST00000560825 S100A11P31949 105 aa7.79□□□□□ -1.16
GABPB1-210ENST00000560825 BTN1A1Q13410 526 aa7.79□□□□□ -1.16
GABPB1-210ENST00000560825 CLINT1Q14677 625 aa7.79□□□□□ -1.16
GABPB1-210ENST00000560825 LINC00612Q8N6U2 182 aa7.79□□□□□ -1.16
GABPB1-210ENST00000560825 CHAC2Q8WUX2 184 aa7.79□□□□□ -1.16
GABPB1-210ENST00000560825 BLNKQ8WV28 456 aa7.79□□□□□ -1.16
GABPB1-210ENST00000560825 ZNF503Q96F45 646 aa7.79□□□□□ -1.16
GABPB1-210ENST00000560825 FAM19A4Q96LR4 140 aa7.79□□□□□ -1.16
GABPB1-210ENST00000560825 VGLL1Q99990 258 aa7.79□□□□□ -1.16
GABPB1-210ENST00000560825 KRTAP1-5Q9BYS1 174 aa7.79□□□□□ -1.16
GABPB1-210ENST00000560825 AGPAT4-IT1Q9H0P7 198 aa7.79□□□□□ -1.16
GABPB1-210ENST00000560825 PPP1R14DQ9NXH3 145 aa7.79□□□□□ -1.16
GABPB1-210ENST00000560825 LINC00588Q9Y4M8 146 aa7.79□□□□□ -1.16
GABPB1-210ENST00000560825 APOBP04114 4563 aaKnown RBP7.79□□□□□ -1.16
GABPB1-210ENST00000560825 IGKV2-40A0A087WW87 121 aaPredicted RBP7.78□□□□□ -1.16
GABPB1-210ENST00000560825 NUDT3O95989 172 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 IGKV2D-40P01614 121 aaPredicted RBP7.78□□□□□ -1.16
GABPB1-210ENST00000560825 S100A7P31151 101 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 Q6ZRG5 221 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 ZNF575Q86XF7 245 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 OR10J6PQ8NGY7 276 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 ZNRF2Q8NHG8 242 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 TMEM263Q8WUH6 116 aaKnown RBP7.78□□□□□ -1.16
GABPB1-210ENST00000560825 C16orf74Q96GX8 76 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 FAM210BQ96KR6 192 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 TP53TG3Q9ULZ0 132 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 A0A0J9YY99 117 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 GAGE12BA1L429 117 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 CBY3A6NI87 242 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 H7BYZ3 331 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 ZNF324O75467 553 aaPredicted RBP7.78□□□□□ -1.16
GABPB1-210ENST00000560825 GAGE7O76087 117 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 OR10J4P0C629 311 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 GAGE12FP0CL80 117 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 GAGE12GP0CL81 117 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 GAGE12IP0CL82 117 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 PVALBP20472 110 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms