RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 LGALS9BQ3B8N2 356 aa10.01□□□□□ -0.81
TPM1-223ENST00000560445 TMEM252Q8N6L7 170 aa10.01□□□□□ -0.81
TPM1-223ENST00000560445 TMEM263Q8WUH6 116 aaKnown RBP10.01□□□□□ -0.81
TPM1-223ENST00000560445 TMEM37Q8WXS4 190 aa10.01□□□□□ -0.81
TPM1-223ENST00000560445 MRPL53Q96EL3 112 aaKnown RBP10.01□□□□□ -0.81
TPM1-223ENST00000560445 ATG101Q9BSB4 218 aa10.01□□□□□ -0.81
TPM1-223ENST00000560445 BATF3Q9NR55 127 aa10.01□□□□□ -0.81
TPM1-223ENST00000560445 SLC39A9Q9NUM3 307 aa10.01□□□□□ -0.81
TPM1-223ENST00000560445 PRELID1Q9Y255 219 aa10.01□□□□□ -0.81
TPM1-223ENST00000560445 KMT2AQ03164 3969 aa10□□□□□ -0.81
TPM1-223ENST00000560445 TRAV12-2A0A075B6T6 113 aa10□□□□□ -0.81
TPM1-223ENST00000560445 INMT-MINDY4F8WBC2 141 aa10□□□□□ -0.81
TPM1-223ENST00000560445 IGLC2P0DOY2 106 aa10□□□□□ -0.81
TPM1-223ENST00000560445 DEFB130BP0DP73 79 aa10□□□□□ -0.81
TPM1-223ENST00000560445 DEFB130AP0DP74 79 aa10□□□□□ -0.81
TPM1-223ENST00000560445 IL15RAQ13261 267 aa10□□□□□ -0.81
TPM1-223ENST00000560445 PDE6HQ13956 83 aa10□□□□□ -0.81
TPM1-223ENST00000560445 TMEM88Q6PEY1 159 aa10□□□□□ -0.81
TPM1-223ENST00000560445 TMEM14CQ9P0S9 112 aa10□□□□□ -0.81
TPM1-223ENST00000560445 CBY3A6NI87 242 aa9.99□□□□□ -0.81
TPM1-223ENST00000560445 E5RGE8 158 aa9.99□□□□□ -0.81
TPM1-223ENST00000560445 PET100P0DJ07 73 aa9.99□□□□□ -0.81
TPM1-223ENST00000560445 FGF7P21781 194 aa9.99□□□□□ -0.81
TPM1-223ENST00000560445 MIC13Q5XKP0 118 aa9.99□□□□□ -0.81
TPM1-223ENST00000560445 NMES1Q9C002 83 aa9.99□□□□□ -0.81
TPM1-223ENST00000560445 C11orf1Q9H5F2 150 aa9.99□□□□□ -0.81
TPM1-223ENST00000560445 AAMDCQ9H7C9 122 aa9.99□□□□□ -0.81
TPM1-223ENST00000560445 SNURFLB1AK76 121 aa9.98□□□□□ -0.81
TPM1-223ENST00000560445 TIMM9Q9Y5J7 89 aa9.98□□□□□ -0.81
TPM1-223ENST00000560445 IGSF23A1L1A6 192 aa9.97□□□□□ -0.81
TPM1-223ENST00000560445 C17orf112F2Z3M2 114 aa9.97□□□□□ -0.81
TPM1-223ENST00000560445 F5H768 121 aa9.97□□□□□ -0.81
TPM1-223ENST00000560445 SSNA1O43805 119 aa9.97□□□□□ -0.81
TPM1-223ENST00000560445 HIST1H1EP10412 219 aaKnown RBP9.97□□□□□ -0.81
TPM1-223ENST00000560445 HTN1P15515 57 aa9.97□□□□□ -0.81
TPM1-223ENST00000560445 PYGO2Q9BRQ0 406 aa9.97□□□□□ -0.81
TPM1-223ENST00000560445 NPCDR1Q9BY65 106 aa9.97□□□□□ -0.81
TPM1-223ENST00000560445 NPIPB6E9PJ23 425 aa9.96□□□□□ -0.82
TPM1-223ENST00000560445 SIX6O95475 246 aa9.96□□□□□ -0.82
TPM1-223ENST00000560445 CCL18P55774 89 aa9.96□□□□□ -0.82
TPM1-223ENST00000560445 LRRC37A5PQ49AS3 106 aa9.96□□□□□ -0.82
TPM1-223ENST00000560445 ZNF680Q8NEM1 530 aa9.96□□□□□ -0.82
TPM1-223ENST00000560445 RNASE8Q8TDE3 154 aaKnown RBP9.96□□□□□ -0.82
TPM1-223ENST00000560445 SAT2Q96F10 170 aaPredicted RBP9.96□□□□□ -0.82
TPM1-223ENST00000560445 MARVELD1Q9BSK0 173 aa9.96□□□□□ -0.82
TPM1-223ENST00000560445 TRBV19A0A075B6N1 114 aa9.95□□□□□ -0.82
TPM1-223ENST00000560445 H3BQ15 152 aa9.95□□□□□ -0.82
TPM1-223ENST00000560445 SLC17A3O00476 420 aa9.95□□□□□ -0.82
TPM1-223ENST00000560445 SLC25A5P05141 298 aaKnown RBP9.95□□□□□ -0.82
TPM1-223ENST00000560445 IFITM3Q01628 133 aa9.95□□□□□ -0.82
TPM1-223ENST00000560445 GFI1BQ5VTD9 330 aa9.95□□□□□ -0.82
TPM1-223ENST00000560445 OR5C1Q8NGR4 320 aa9.95□□□□□ -0.82
TPM1-223ENST00000560445 LINC00477Q96M19 166 aa9.95□□□□□ -0.82
TPM1-223ENST00000560445 MRPL32Q9BYC8 188 aaKnown RBP9.95□□□□□ -0.82
TPM1-223ENST00000560445 PLAC8L1A1L4L8 177 aa9.94□□□□□ -0.82
TPM1-223ENST00000560445 PRSS29PA6NIE9 313 aa9.94□□□□□ -0.82
TPM1-223ENST00000560445 NMBP08949 121 aa9.94□□□□□ -0.82
TPM1-223ENST00000560445 SNRPCP09234 159 aaKnown RBP9.94□□□□□ -0.82
TPM1-223ENST00000560445 NHLH2Q02577 135 aa9.94□□□□□ -0.82
TPM1-223ENST00000560445 CLINT1Q14677 625 aa9.94□□□□□ -0.82
TPM1-223ENST00000560445 MORN5Q5VZ52 161 aa9.94□□□□□ -0.82
TPM1-223ENST00000560445 ZNF503Q96F45 646 aa9.94□□□□□ -0.82
TPM1-223ENST00000560445 NOP10Q9NPE3 64 aaKnown RBP9.94□□□□□ -0.82
TPM1-223ENST00000560445 VPS13DQ5THJ4 4388 aa9.93□□□□□ -0.82
TPM1-223ENST00000560445 FRAS1Q86XX4 4008 aa9.93□□□□□ -0.82
TPM1-223ENST00000560445 TRAV5A0A0B4J249 113 aa9.93□□□□□ -0.82
TPM1-223ENST00000560445 H3BTX0 84 aa9.93□□□□□ -0.82
TPM1-223ENST00000560445 M0R2N4 97 aa9.93□□□□□ -0.82
TPM1-223ENST00000560445 NUDT3O95989 172 aa9.93□□□□□ -0.82
TPM1-223ENST00000560445 AZU1P20160 251 aa9.93□□□□□ -0.82
TPM1-223ENST00000560445 TMEM78Q5T7P6 136 aa9.93□□□□□ -0.82
TPM1-223ENST00000560445 PPP1R1CQ8WVI7 109 aa9.93□□□□□ -0.82
TPM1-223ENST00000560445 ZNF586Q9NXT0 402 aa9.93□□□□□ -0.82
TPM1-223ENST00000560445 OR5AC2Q9NZP5 309 aa9.93□□□□□ -0.82
TPM1-223ENST00000560445 DNAH6Q9C0G6 4158 aa9.92□□□□□ -0.82
TPM1-223ENST00000560445 C7orf71A4D174 169 aa9.92□□□□□ -0.82
TPM1-223ENST00000560445 H3BNG1 76 aa9.92□□□□□ -0.82
TPM1-223ENST00000560445 M6PRP20645 277 aa9.92□□□□□ -0.82
TPM1-223ENST00000560445 CSN1S1P47710 185 aa9.92□□□□□ -0.82
TPM1-223ENST00000560445 DAZ2Q13117 558 aaKnown RBP9.92□□□□□ -0.82
TPM1-223ENST00000560445 C1orf134Q5TEV5 83 aa9.92□□□□□ -0.82
TPM1-223ENST00000560445 THAP6Q8TBB0 222 aa9.92□□□□□ -0.82
TPM1-223ENST00000560445 IGLV2-18A0A075B6J9 118 aa9.91□□□□□ -0.82
TPM1-223ENST00000560445 TRAV12-3A0A0B4J271 114 aa9.91□□□□□ -0.82
TPM1-223ENST00000560445 TRBV7-9A0A0J9YWB2 115 aa9.91□□□□□ -0.82
TPM1-223ENST00000560445 PRAC2D3DTV9 90 aa9.91□□□□□ -0.82
TPM1-223ENST00000560445 IFNA5P01569 189 aa9.91□□□□□ -0.82
TPM1-223ENST00000560445 CT45A10P0DMU9 189 aa9.91□□□□□ -0.82
TPM1-223ENST00000560445 TAS2R45P59539 299 aa9.91□□□□□ -0.82
TPM1-223ENST00000560445 Q6ZR54 194 aa9.91□□□□□ -0.82
TPM1-223ENST00000560445 SCGB1C1Q8TD33 95 aa9.91□□□□□ -0.82
TPM1-223ENST00000560445 GNPNAT1Q96EK6 184 aaPredicted RBP9.91□□□□□ -0.82
TPM1-223ENST00000560445 ATP5SQ99766 215 aa9.91□□□□□ -0.82
TPM1-223ENST00000560445 LINC00467Q9BRT7 94 aa9.91□□□□□ -0.82
TPM1-223ENST00000560445 WDR61Q9GZS3 305 aaKnown RBP9.91□□□□□ -0.82
TPM1-223ENST00000560445 GPX1P07203 203 aa9.9□□□□□ -0.82
TPM1-223ENST00000560445 NBEAP1P0C6P0 100 aa9.9□□□□□ -0.82
TPM1-223ENST00000560445 H2BFSP57053 126 aa9.9□□□□□ -0.82
TPM1-223ENST00000560445 TTC32Q5I0X7 151 aa9.9□□□□□ -0.82
TPM1-223ENST00000560445 C9orf47Q6ZRZ4 202 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 274.2 ms