RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 QRFPP83859 136 aa10.89□□□□□ -0.67
TRAF3-208ENST00000560371 SRSF4Q08170 494 aaKnown RBP10.88□□□□□ -0.67
TRAF3-208ENST00000560371 TCF15Q12870 199 aa10.88□□□□□ -0.67
TRAF3-208ENST00000560371 CLDN16Q9Y5I7 305 aa10.88□□□□□ -0.67
TRAF3-208ENST00000560371 VCYO14598 125 aa10.88□□□□□ -0.67
TRAF3-208ENST00000560371 ARHGAP32A7KAX9 2087 aa10.88□□□□□ -0.67
TRAF3-208ENST00000560371 ZNF625Q96I27 306 aaPredicted RBP10.88□□□□□ -0.67
TRAF3-208ENST00000560371 C15orf62A8K5M9 175 aa10.88□□□□□ -0.67
TRAF3-208ENST00000560371 LMO1P25800 156 aa10.88□□□□□ -0.67
TRAF3-208ENST00000560371 C1QL4Q86Z23 238 aa10.88□□□□□ -0.67
TRAF3-208ENST00000560371 FNDC10F2Z333 226 aa10.88□□□□□ -0.67
TRAF3-208ENST00000560371 IGFL4Q6B9Z1 124 aa10.88□□□□□ -0.67
TRAF3-208ENST00000560371 Q8TCH9 128 aa10.88□□□□□ -0.67
TRAF3-208ENST00000560371 CHCHD1Q96BP2 118 aaKnown RBP10.88□□□□□ -0.67
TRAF3-208ENST00000560371 ERCC8Q13216 396 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 C1orf159Q96HA4 380 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 LINC00587B1AMM8 73 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 E9PQ18 207 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 SEC11AP67812 179 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 PDE6HQ13956 83 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 LYZL1Q6UWQ5 148 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 PAX4O43316 350 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 MLANAQ16655 118 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 XCL2Q9UBD3 114 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 FOXL1Q12952 345 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 TCTEX1D4Q5JR98 221 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 C14orf178Q8N769 122 aaPredicted RBP10.87□□□□□ -0.67
TRAF3-208ENST00000560371 TMEM170AQ8WVE7 144 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 SPOCK3Q9BQ16 436 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 D6R8Y8 96 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 C6orf226Q5I0X4 101 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 G3V318 75 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 NCR2O95944 276 aa10.87□□□□□ -0.67
TRAF3-208ENST00000560371 NAV2Q8IVL1 2488 aa10.86□□□□□ -0.67
TRAF3-208ENST00000560371 SH2D1AO60880 128 aa10.86□□□□□ -0.67
TRAF3-208ENST00000560371 IGKCP01834 107 aa10.86□□□□□ -0.67
TRAF3-208ENST00000560371 TEX43Q6ZNM6 134 aa10.86□□□□□ -0.67
TRAF3-208ENST00000560371 FAM215AQ9Y5M1 114 aa10.86□□□□□ -0.67
TRAF3-208ENST00000560371 F5H768 121 aa10.86□□□□□ -0.67
TRAF3-208ENST00000560371 C1orf122Q6ZSJ8 110 aa10.86□□□□□ -0.67
TRAF3-208ENST00000560371 TLN1Q9Y490 2541 aaKnown RBP10.86□□□□□ -0.67
TRAF3-208ENST00000560371 CD300EQ496F6 205 aaPredicted RBP10.86□□□□□ -0.67
TRAF3-208ENST00000560371 ANAPC10Q9UM13 185 aa10.86□□□□□ -0.67
TRAF3-208ENST00000560371 DMRT1Q9Y5R6 373 aa10.86□□□□□ -0.67
TRAF3-208ENST00000560371 A0A1B0GV90 55 aa10.86□□□□□ -0.67
TRAF3-208ENST00000560371 NDUFB8O95169 186 aa10.86□□□□□ -0.67
TRAF3-208ENST00000560371 TRAV8-4A0A0B4J246 113 aa10.86□□□□□ -0.67
TRAF3-208ENST00000560371 TRAV1-1A0A0B4J248 108 aa10.86□□□□□ -0.67
TRAF3-208ENST00000560371 DAD1P61803 113 aa10.86□□□□□ -0.67
TRAF3-208ENST00000560371 TMEM14BQ9NUH8 114 aa10.86□□□□□ -0.67
TRAF3-208ENST00000560371 AMBPP02760 352 aa10.85□□□□□ -0.67
TRAF3-208ENST00000560371 APOC4P55056 127 aa10.85□□□□□ -0.67
TRAF3-208ENST00000560371 Q6ZR03 302 aa10.85□□□□□ -0.67
TRAF3-208ENST00000560371 ANXA2RQ3ZCQ2 193 aa10.85□□□□□ -0.67
TRAF3-208ENST00000560371 LINC01559Q495D7 138 aa10.85□□□□□ -0.67
TRAF3-208ENST00000560371 IGLV3-9A0A075B6K5 115 aa10.85□□□□□ -0.67
TRAF3-208ENST00000560371 IGLV1-44P01699 117 aa10.85□□□□□ -0.67
TRAF3-208ENST00000560371 SRSF3P84103 164 aaKnown RBP10.85□□□□□ -0.67
TRAF3-208ENST00000560371 SPINK13Q1W4C9 94 aa10.85□□□□□ -0.67
TRAF3-208ENST00000560371 IL17RELQ6ZVW7 336 aa10.85□□□□□ -0.67
TRAF3-208ENST00000560371 LRRK2Q5S007 2527 aa10.85□□□□□ -0.67
TRAF3-208ENST00000560371 FN1P02751 2386 aaKnown RBP10.85□□□□□ -0.67
TRAF3-208ENST00000560371 ETV2O00321 342 aaPredicted RBP10.85□□□□□ -0.67
TRAF3-208ENST00000560371 MS4A6AQ9H2W1 248 aa10.84□□□□□ -0.67
TRAF3-208ENST00000560371 LSM4Q9Y4Z0 139 aaKnown RBP10.84□□□□□ -0.67
TRAF3-208ENST00000560371 HS3ST6Q96QI5 342 aa10.84□□□□□ -0.67
TRAF3-208ENST00000560371 TET2Q6N021 2002 aaPredicted RBP10.84□□□□□ -0.67
TRAF3-208ENST00000560371 CSTL1Q9H114 145 aa10.84□□□□□ -0.67
TRAF3-208ENST00000560371 A0A087WWL8 130 aa10.84□□□□□ -0.67
TRAF3-208ENST00000560371 SS18Q15532 418 aa10.84□□□□□ -0.67
TRAF3-208ENST00000560371 DERL1Q9BUN8 251 aa10.84□□□□□ -0.67
TRAF3-208ENST00000560371 LIME1Q9H400 295 aa10.84□□□□□ -0.67
TRAF3-208ENST00000560371 ORAOV1Q8WV07 137 aa10.84□□□□□ -0.67
TRAF3-208ENST00000560371 ATRAIDQ6UW56 229 aa10.83□□□□□ -0.68
TRAF3-208ENST00000560371 MCRIP2Q9BUT9 160 aaKnown RBP10.83□□□□□ -0.68
TRAF3-208ENST00000560371 ZMAT4Q9H898 229 aa10.83□□□□□ -0.68
TRAF3-208ENST00000560371 NHP2Q9NX24 153 aaKnown RBP10.83□□□□□ -0.68
TRAF3-208ENST00000560371 MST1LQ2TV78 715 aa10.83□□□□□ -0.68
TRAF3-208ENST00000560371 LINC01551Q86U37 167 aa10.83□□□□□ -0.68
TRAF3-208ENST00000560371 RASL11AQ6T310 242 aa10.83□□□□□ -0.68
TRAF3-208ENST00000560371 Q6ZRM9 215 aa10.83□□□□□ -0.68
TRAF3-208ENST00000560371 SHANK2-AS3Q9BTD1 123 aa10.83□□□□□ -0.68
TRAF3-208ENST00000560371 PRB1P04280 392 aa10.83□□□□□ -0.68
TRAF3-208ENST00000560371 LOXP28300 417 aaPredicted RBP10.83□□□□□ -0.68
TRAF3-208ENST00000560371 COX11Q9Y6N1 276 aa10.83□□□□□ -0.68
TRAF3-208ENST00000560371 DKK1O94907 266 aa10.82□□□□□ -0.68
TRAF3-208ENST00000560371 TEX36Q5VZQ5 186 aa10.82□□□□□ -0.68
TRAF3-208ENST00000560371 ZNF833PQ6ZTB9 187 aa10.82□□□□□ -0.68
TRAF3-208ENST00000560371 NUP35Q8NFH5 326 aa10.82□□□□□ -0.68
TRAF3-208ENST00000560371 JMJD1CQ15652 2540 aa10.82□□□□□ -0.68
TRAF3-208ENST00000560371 A0A0G2JRQ6 117 aa10.82□□□□□ -0.68
TRAF3-208ENST00000560371 FGF16O43320 207 aa10.82□□□□□ -0.68
TRAF3-208ENST00000560371 TMEM242Q9NWH2 141 aa10.82□□□□□ -0.68
TRAF3-208ENST00000560371 TRAV13-1A0A0B4J241 112 aa10.82□□□□□ -0.68
TRAF3-208ENST00000560371 M0R2P5 195 aa10.82□□□□□ -0.68
TRAF3-208ENST00000560371 FNDC4Q9H6D8 234 aaPredicted RBP10.82□□□□□ -0.68
TRAF3-208ENST00000560371 SLX1AQ9BQ83 275 aa10.82□□□□□ -0.68
TRAF3-208ENST00000560371 NDUFA4L2Q9NRX3 87 aa10.82□□□□□ -0.68
TRAF3-208ENST00000560371 TMEM238C9JI98 176 aa10.81□□□□□ -0.68
TRAF3-208ENST00000560371 CFHR3Q02985 330 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms