RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 LINC00482Q8N8I6 264 aa5.45□□□□□ -1.54
HMBOX1-214ENST00000560357 C2CD4CQ8TF44 421 aa5.45□□□□□ -1.54
HMBOX1-214ENST00000560357 DCANP1Q8TF63 244 aa5.45□□□□□ -1.54
HMBOX1-214ENST00000560357 TMEM158Q8WZ71 300 aa5.45□□□□□ -1.54
HMBOX1-214ENST00000560357 HIST1H2BAQ96A08 127 aa5.45□□□□□ -1.54
HMBOX1-214ENST00000560357 RPUSD4Q96CM3 377 aaKnown RBP5.45□□□□□ -1.54
HMBOX1-214ENST00000560357 SLC50A1Q9BRV3 221 aa5.45□□□□□ -1.54
HMBOX1-214ENST00000560357 DERL1Q9BUN8 251 aa5.45□□□□□ -1.54
HMBOX1-214ENST00000560357 PARLQ9H300 379 aa5.45□□□□□ -1.54
HMBOX1-214ENST00000560357 AAMDCQ9H7C9 122 aa5.45□□□□□ -1.54
HMBOX1-214ENST00000560357 PRELID1Q9Y255 219 aa5.45□□□□□ -1.54
HMBOX1-214ENST00000560357 CARHSP1Q9Y2V2 147 aaKnown RBP5.45□□□□□ -1.54
HMBOX1-214ENST00000560357 TENM1Q9UKZ4 2725 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 ZNF727A8MUV8 499 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 ZNF705FA8MVS1 300 aaPredicted RBP5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 DIRC3C9JPN6 131 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 K7EQG2 157 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 PF4P02776 101 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 RPL35P42766 123 aaKnown RBP5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 PSG3Q16557 428 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 FAM74A3Q4VXF1 159 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 LCN12Q6JVE5 192 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 GBGT1Q8N5D6 347 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 RNF182Q8N6D2 247 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 CMTM2Q8TAZ6 248 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 DYNLRB2Q8TF09 96 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 MRPL53Q96EL3 112 aaKnown RBP5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 C16orf92Q96LL3 132 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 C20orf173Q96LM9 149 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 LINC00479Q96M42 142 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 SMIM7Q9BQ49 75 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 ATG101Q9BSB4 218 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 MS4A6AQ9H2W1 248 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 CLEC5AQ9NY25 188 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 RPH3ALQ9UNE2 315 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 KLF12Q9Y4X4 402 aa5.44□□□□□ -1.54
HMBOX1-214ENST00000560357 TRBV20OR9-2A0A075B6H5 130 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 TRAV2A0A0B4J234 112 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 TRAV34A0A0B4J273 112 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 TRAV25A0A0B4J276 109 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 PRAC2D3DTV9 90 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 DNASE2O00115 360 aaPredicted RBP5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 ISLRO14498 428 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 TSPAN4O14817 238 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 IGLV2-11P01706 119 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 APOC3P02656 99 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 PRB4P10163 310 aaPredicted RBP5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 AKR1C3P42330 323 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 CSN1S1P47710 185 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 TFPI2P48307 235 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 CNN1P51911 297 aaKnown RBP5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 TAS2R60P59551 318 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 GUCA2BQ16661 112 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 TMEM183BQ1AE95 376 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 TMEM241Q24JQ0 296 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 ZNF674Q2M3X9 581 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 CD300EQ496F6 205 aaPredicted RBP5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 SAMD13Q5VXD3 122 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 C12orf54Q6X4T0 127 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 GOLT1AQ6ZVE7 132 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 WFDC3Q8IUB2 231 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 TMEM61Q8N0U2 210 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 C3orf56Q8N813 242 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 SPATA3Q8NHX4 192 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 SDF2L1Q9HCN8 221 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 SORL1Q92673 2214 aa5.43□□□□□ -1.54
HMBOX1-214ENST00000560357 IGKV2-40A0A087WW87 121 aaPredicted RBP5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 TRBV6-1A0A0K0K1D8 114 aa5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 SERTM2A0A1B0GWG4 89 aa5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 IZUMO1RA6ND01 250 aa5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 C9JCJ5 164 aa5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 SAP30O75446 220 aa5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 IGKV2D-40P01614 121 aaPredicted RBP5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 IGLV1-51P01701 117 aa5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 IGLV2-8P01709 118 aa5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 S100A9P06702 114 aaKnown RBP5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 ID1P41134 155 aa5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 PAFAH1B2P68402 229 aa5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 SHISA2Q6UWI4 295 aa5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 RBPMS2Q6ZRY4 209 aaKnown RBP5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 FAM24BQ8N5W8 94 aa5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 WFDC9Q8NEX5 89 aa5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 TVP23CQ96ET8 276 aa5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 IGF2BP2-AS1Q96M15 143 aa5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 NIPSNAP3BQ9BS92 247 aa5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 NAT8Q9UHE5 227 aa5.42□□□□□ -1.54
HMBOX1-214ENST00000560357 FBN1P35555 2871 aaKnown RBP5.41□□□□□ -1.54
HMBOX1-214ENST00000560357 TRAV8-1A0A0A6YYK1 113 aa5.41□□□□□ -1.54
HMBOX1-214ENST00000560357 RBAKDNA6NC62 111 aa5.41□□□□□ -1.54
HMBOX1-214ENST00000560357 PGPEP1LA6NFU8 196 aa5.41□□□□□ -1.54
HMBOX1-214ENST00000560357 K7EQM0 130 aa5.41□□□□□ -1.54
HMBOX1-214ENST00000560357 ZNF688P0C7X2 276 aa5.41□□□□□ -1.54
HMBOX1-214ENST00000560357 GNG4P50150 75 aa5.41□□□□□ -1.54
HMBOX1-214ENST00000560357 DEFB1P60022 68 aa5.41□□□□□ -1.54
HMBOX1-214ENST00000560357 UBE2G1P62253 170 aa5.41□□□□□ -1.54
HMBOX1-214ENST00000560357 RPL23P62829 140 aaKnown RBP5.41□□□□□ -1.54
HMBOX1-214ENST00000560357 FLI1Q01543 452 aaPredicted RBP5.41□□□□□ -1.54
HMBOX1-214ENST00000560357 CENPWQ5EE01 88 aa5.41□□□□□ -1.54
HMBOX1-214ENST00000560357 BAGE2Q86Y30 109 aa5.41□□□□□ -1.54
HMBOX1-214ENST00000560357 LURAP1LQ8IV03 231 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms