RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 ALG5Q9Y673 324 aa13.47□□□□□ -0.25
RABGGTA-214ENST00000560163 C9orf170A2RU37 121 aa13.46□□□□□ -0.25
RABGGTA-214ENST00000560163 SFT2D2O95562 160 aa13.46□□□□□ -0.25
RABGGTA-214ENST00000560163 RLN2P04090 185 aa13.46□□□□□ -0.25
RABGGTA-214ENST00000560163 ZNF431Q8TF32 576 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-214ENST00000560163 TMPRSS5Q9H3S3 457 aa13.46□□□□□ -0.25
RABGGTA-214ENST00000560163 HMCN2Q8NDA2 5059 aa13.45□□□□□ -0.26
RABGGTA-214ENST00000560163 A0A087X0K7 114 aa13.45□□□□□ -0.26
RABGGTA-214ENST00000560163 IAPPP10997 89 aa13.45□□□□□ -0.26
RABGGTA-214ENST00000560163 RPL7P18124 248 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-214ENST00000560163 S100A7P31151 101 aa13.45□□□□□ -0.26
RABGGTA-214ENST00000560163 MITD1Q8WV92 249 aa13.45□□□□□ -0.26
RABGGTA-214ENST00000560163 SEC22CQ9BRL7 303 aa13.45□□□□□ -0.26
RABGGTA-214ENST00000560163 J3QL48 77 aa13.44□□□□□ -0.26
RABGGTA-214ENST00000560163 ANXA3P12429 323 aa13.44□□□□□ -0.26
RABGGTA-214ENST00000560163 VAMP1P23763 118 aa13.44□□□□□ -0.26
RABGGTA-214ENST00000560163 DAZ2Q13117 558 aaKnown RBP13.44□□□□□ -0.26
RABGGTA-214ENST00000560163 Q6ZSN1 163 aa13.44□□□□□ -0.26
RABGGTA-214ENST00000560163 CCDC28AQ8IWP9 274 aa13.44□□□□□ -0.26
RABGGTA-214ENST00000560163 LRTM2Q8N967 370 aa13.44□□□□□ -0.26
RABGGTA-214ENST00000560163 RPUSD4Q96CM3 377 aaKnown RBP13.44□□□□□ -0.26
RABGGTA-214ENST00000560163 PIGBOS1A0A0B4J2F0 54 aa13.43□□□□□ -0.26
RABGGTA-214ENST00000560163 A0A1B0GVG6 124 aa13.43□□□□□ -0.26
RABGGTA-214ENST00000560163 NXPH4O95158 308 aa13.43□□□□□ -0.26
RABGGTA-214ENST00000560163 GCSHP23434 173 aa13.43□□□□□ -0.26
RABGGTA-214ENST00000560163 SRPXP78539 464 aa13.43□□□□□ -0.26
RABGGTA-214ENST00000560163 GFI1BQ5VTD9 330 aa13.43□□□□□ -0.26
RABGGTA-214ENST00000560163 Q6ZTI0 123 aa13.43□□□□□ -0.26
RABGGTA-214ENST00000560163 NFE4Q86UQ8 179 aa13.43□□□□□ -0.26
RABGGTA-214ENST00000560163 CHAC2Q8WUX2 184 aa13.43□□□□□ -0.26
RABGGTA-214ENST00000560163 SNURFLB1AK76 121 aa13.42□□□□□ -0.26
RABGGTA-214ENST00000560163 MRPS12O15235 138 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-214ENST00000560163 PLP1P60201 277 aa13.42□□□□□ -0.26
RABGGTA-214ENST00000560163 PARD6GQ9BYG4 376 aaPredicted RBP13.42□□□□□ -0.26
RABGGTA-214ENST00000560163 PAIP2BQ9ULR5 123 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-214ENST00000560163 HAMPP81172 84 aa13.41□□□□□ -0.26
RABGGTA-214ENST00000560163 ACOT7LQ6ZUV0 252 aa13.41□□□□□ -0.26
RABGGTA-214ENST00000560163 C12orf45Q8N5I9 185 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-214ENST00000560163 HIGD1AQ9Y241 93 aa13.41□□□□□ -0.26
RABGGTA-214ENST00000560163 DUXBA0A1W2PPF3 345 aa13.4□□□□□ -0.26
RABGGTA-214ENST00000560163 RAP2BP61225 183 aa13.4□□□□□ -0.26
RABGGTA-214ENST00000560163 RRAS2P62070 204 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-214ENST00000560163 HYPMO75409 117 aa13.39□□□□□ -0.27
RABGGTA-214ENST00000560163 SLC25A6P12236 298 aa13.39□□□□□ -0.27
RABGGTA-214ENST00000560163 BCAP31P51572 246 aa13.39□□□□□ -0.27
RABGGTA-214ENST00000560163 CYP2G1PQ6ZSU1 146 aa13.39□□□□□ -0.27
RABGGTA-214ENST00000560163 LRRC20Q8TCA0 184 aa13.39□□□□□ -0.27
RABGGTA-214ENST00000560163 MED28Q9H204 178 aa13.39□□□□□ -0.27
RABGGTA-214ENST00000560163 ZNF331Q9NQX6 463 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-214ENST00000560163 PMS2P5A8MQ11 134 aa13.38□□□□□ -0.27
RABGGTA-214ENST00000560163 KRTAP29-1A8MX34 341 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-214ENST00000560163 PRAC2D3DTV9 90 aa13.38□□□□□ -0.27
RABGGTA-214ENST00000560163 SSNA1O43805 119 aa13.38□□□□□ -0.27
RABGGTA-214ENST00000560163 RPP30P78346 268 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-214ENST00000560163 AKR1C1Q04828 323 aa13.38□□□□□ -0.27
RABGGTA-214ENST00000560163 PATE2Q6UY27 113 aa13.38□□□□□ -0.27
RABGGTA-214ENST00000560163 ZBTB8BQ8NAP8 495 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-214ENST00000560163 CIB3Q96Q77 187 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-214ENST00000560163 DNAH8Q96JB1 4490 aa13.38□□□□□ -0.27
RABGGTA-214ENST00000560163 hCG_2014768A0A024R1R8 64 aa13.37□□□□□ -0.27
RABGGTA-214ENST00000560163 SYNGR2O43760 224 aa13.37□□□□□ -0.27
RABGGTA-214ENST00000560163 ZNF324O75467 553 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-214ENST00000560163 MED6O75586 246 aa13.37□□□□□ -0.27
RABGGTA-214ENST00000560163 CXCL2P19875 107 aa13.37□□□□□ -0.27
RABGGTA-214ENST00000560163 LYPD5Q6UWN5 251 aa13.37□□□□□ -0.27
RABGGTA-214ENST00000560163 TMEM70Q9BUB7 260 aa13.37□□□□□ -0.27
RABGGTA-214ENST00000560163 WRBO00258 174 aa13.36□□□□□ -0.27
RABGGTA-214ENST00000560163 OR5G3P0C626 314 aa13.36□□□□□ -0.27
RABGGTA-214ENST00000560163 LINC00869P0C866 280 aa13.36□□□□□ -0.27
RABGGTA-214ENST00000560163 C11orf72Q8NBR9 251 aa13.36□□□□□ -0.27
RABGGTA-214ENST00000560163 PYGO2Q9BRQ0 406 aa13.36□□□□□ -0.27
RABGGTA-214ENST00000560163 TRGV2A0A075B6R0 118 aa13.35□□□□□ -0.27
RABGGTA-214ENST00000560163 TRAV12-3A0A0B4J271 114 aa13.35□□□□□ -0.27
RABGGTA-214ENST00000560163 SPANXN5Q5MJ07 72 aa13.35□□□□□ -0.27
RABGGTA-214ENST00000560163 ASB13Q8WXK3 278 aa13.35□□□□□ -0.27
RABGGTA-214ENST00000560163 ICOSQ9Y6W8 199 aa13.35□□□□□ -0.27
RABGGTA-214ENST00000560163 LRP1Q07954 4544 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-214ENST00000560163 CT45A10P0DMU9 189 aa13.34□□□□□ -0.27
RABGGTA-214ENST00000560163 SELENOTP62341 195 aa13.34□□□□□ -0.27
RABGGTA-214ENST00000560163 LCN15Q6UWW0 184 aa13.34□□□□□ -0.27
RABGGTA-214ENST00000560163 SLC50A1Q9BRV3 221 aa13.34□□□□□ -0.27
RABGGTA-214ENST00000560163 GSN-AS1Q9NRJ2 163 aa13.34□□□□□ -0.27
RABGGTA-214ENST00000560163 MSRB1Q9NZV6 116 aa13.34□□□□□ -0.27
RABGGTA-214ENST00000560163 FUT9Q9Y231 359 aa13.34□□□□□ -0.27
RABGGTA-214ENST00000560163 TRAV9-2A0A087WT02 112 aa13.33□□□□□ -0.28
RABGGTA-214ENST00000560163 K7EP13 123 aa13.33□□□□□ -0.28
RABGGTA-214ENST00000560163 PAX4O43316 350 aa13.33□□□□□ -0.28
RABGGTA-214ENST00000560163 SNRPCP09234 159 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-214ENST00000560163 TEPPQ6URK8 271 aa13.33□□□□□ -0.28
RABGGTA-214ENST00000560163 ODF3Q96PU9 254 aa13.33□□□□□ -0.28
RABGGTA-214ENST00000560163 LINC00467Q9BRT7 94 aa13.33□□□□□ -0.28
RABGGTA-214ENST00000560163 MGAT4CQ9UBM8 478 aa13.33□□□□□ -0.28
RABGGTA-214ENST00000560163 LY96Q9Y6Y9 160 aa13.33□□□□□ -0.28
RABGGTA-214ENST00000560163 H3BP45 60 aa13.32□□□□□ -0.28
RABGGTA-214ENST00000560163 J3KRW8 73 aa13.32□□□□□ -0.28
RABGGTA-214ENST00000560163 SLC17A3O00476 420 aa13.32□□□□□ -0.28
RABGGTA-214ENST00000560163 ARL6Q9H0F7 186 aa13.32□□□□□ -0.28
RABGGTA-214ENST00000560163 ARV1Q9H2C2 271 aa13.32□□□□□ -0.28
RABGGTA-214ENST00000560163 STRAPQ9Y3F4 350 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-214ENST00000560163 TRGV1A0A0A0MS02 117 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms