RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ELOBQ15370 118 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 RNASE10Q5GAN6 216 aaKnown RBP1.75□□□□□ -2.13
SPG11-218ENST00000559754 HAGHLQ6PII5 290 aaPredicted RBP1.75□□□□□ -2.13
SPG11-218ENST00000559754 HYLS1Q96M11 299 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 CST9LQ9H4G1 147 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 BANF2Q9H503 90 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 NIT2Q9NQR4 276 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 FOCADQ5VW36 1801 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 LAMB2P55268 1798 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 PHLPP1O60346 1717 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 COL4A5P29400 1685 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 USP54Q70EL1 1684 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 MYH13Q9UKX3 1938 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.74□□□□□ -2.13
SPG11-218ENST00000559754 hDV103S1A0JD37 113 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 M0R233 179 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 SLC25A5P05141 298 aaKnown RBP1.74□□□□□ -2.13
SPG11-218ENST00000559754 GPX1P07203 203 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 ASAH2BP0C7U1 165 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 IGLC6P0CF74 106 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 SAA1P0DJI8 122 aaPredicted RBP1.74□□□□□ -2.13
SPG11-218ENST00000559754 DSCR4P56555 118 aaPredicted RBP1.74□□□□□ -2.13
SPG11-218ENST00000559754 RPS25P62851 125 aaKnown RBP1.74□□□□□ -2.13
SPG11-218ENST00000559754 SELENOWP63302 87 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 CTAGE3PQ8IX95 158 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 Q8N814 137 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 OR2T35Q8NGX2 323 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 TPRKBQ9Y3C4 175 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 STRCP1A6NGW2 1772 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 MICAL3Q7RTP6 2002 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 COL1A1P02452 1464 aaPredicted RBP1.74□□□□□ -2.13
SPG11-218ENST00000559754 TNS3Q68CZ2 1445 aa1.74□□□□□ -2.13
SPG11-218ENST00000559754 A0A087WSZ3 146 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 IGKV2D-26A0A0A0MRZ7 120 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 TRAV12-1A0A0B4J245 112 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 TRGV4A0A0C4DH28 118 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 A0A1B0GV90 55 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 ZNF737O75373 536 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 HBDP02042 147 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 CRPP02741 224 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 AKR1D1P51857 326 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 KRTAP12-4P60329 112 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 RRAS2P62070 204 aaPredicted RBP1.73□□□□□ -2.13
SPG11-218ENST00000559754 CDK6Q00534 326 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 HES1Q14469 280 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 OR5D14Q8NGL3 314 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 OR10AC1Q8NH08 325 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 TMEM254Q8TBM7 123 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 SPACA4Q8TDM5 124 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 ARL11Q969Q4 196 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 MUCL1Q96DR8 90 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 OR4C12Q96R67 309 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 TP53RKQ96S44 253 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 LPAR5Q9H1C0 372 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 TNFSF18Q9UNG2 199 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 COL24A1Q17RW2 1714 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 SCN3AQ9NY46 2000 aa1.73□□□□□ -2.13
SPG11-218ENST00000559754 EIF4G3O43432 1585 aaKnown RBP1.72□□□□□ -2.13
SPG11-218ENST00000559754 MYH9P35579 1960 aaKnown RBP1.72□□□□□ -2.13
SPG11-218ENST00000559754 GRIN2AQ12879 1464 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 TRAV27A0A087WT01 109 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 LOC107986453A0A1B0GWG9 222 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 B4DSR2 109 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 E7EUB6 86 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 H3BRN7 92 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 K7ERU9 68 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 DLEU1O43261 78 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 LINC00694P0DN24 101 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 CCL4P13236 92 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 HLA-DRB4P13762 266 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 HIST1H1BP16401 226 aaKnown RBP1.72□□□□□ -2.13
SPG11-218ENST00000559754 PDE6HQ13956 83 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 DIAPH2-AS1Q14236 149 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 Q1T7F1 81 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 C1orf134Q5TEV5 83 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 TMEM91Q6ZNR0 172 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 TEN1Q86WV5 123 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 LINC00311Q8N616 119 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 C2orf88Q9BSF0 95 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 LINC00470Q9BZP3 86 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 HLA-DRB4X5D2U9 266 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 MYOM3Q5VTT5 1437 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 KIAA1549Q9HCM3 1950 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 SYNJ1O43426 1573 aa1.72□□□□□ -2.13
SPG11-218ENST00000559754 SDK2Q58EX2 2172 aa1.71□□□□□ -2.14
SPG11-218ENST00000559754 IGKV3D-11A0A0A0MRZ8 115 aa1.71□□□□□ -2.14
SPG11-218ENST00000559754 C2orf70A6NJV1 201 aa1.71□□□□□ -2.14
SPG11-218ENST00000559754 LINC00587B1AMM8 73 aa1.71□□□□□ -2.14
SPG11-218ENST00000559754 F8W036 122 aa1.71□□□□□ -2.14
SPG11-218ENST00000559754 APOC1P02654 83 aa1.71□□□□□ -2.14
SPG11-218ENST00000559754 COPZ1P61923 177 aa1.71□□□□□ -2.14
SPG11-218ENST00000559754 EMX2Q04743 252 aa1.71□□□□□ -2.14
SPG11-218ENST00000559754 ASB16-AS1Q495Z4 193 aa1.71□□□□□ -2.14
SPG11-218ENST00000559754 ARPINQ7Z6K5 226 aa1.71□□□□□ -2.14
SPG11-218ENST00000559754 SFT2D1Q8WV19 159 aa1.71□□□□□ -2.14
SPG11-218ENST00000559754 CLEC2BQ92478 149 aa1.71□□□□□ -2.14
SPG11-218ENST00000559754 RAB37Q96AX2 223 aa1.71□□□□□ -2.14
SPG11-218ENST00000559754 TTTY12Q9BZ98 90 aa1.71□□□□□ -2.14
SPG11-218ENST00000559754 SOX21Q9Y651 276 aaPredicted RBP1.71□□□□□ -2.14
SPG11-218ENST00000559754 ARHGAP31Q2M1Z3 1444 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms