RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 SCGB2A1O75556 95 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 COX6B1P14854 86 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 C1orf194Q5T5A4 169 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 IGFL4Q6B9Z1 124 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 TEX43Q6ZNM6 134 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 NIT1Q86X76 327 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 KIR2DL5AQ8N109 375 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 Q8N976 141 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 IGKV2-40A0A087WW87 121 aaPredicted RBP8.57□□□□□ -1.04
SPG11-217ENST00000559511 TRAV40A0A0B4J280 105 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 IGHV1-69DA0A0B4J2H0 117 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 IGKV2D-40P01614 121 aaPredicted RBP8.57□□□□□ -1.04
SPG11-217ENST00000559511 IGHV1-69P01742 117 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 IGHG4P01861 327 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 KRTDAPP60985 99 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 PSG9Q00887 426 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 PIFOQ8TCI5 191 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 NDUFAF3Q9BU61 184 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 CHD6Q8TD26 2715 aa8.56□□□□□ -1.04
SPG11-217ENST00000559511 NTF3P20783 257 aa8.56□□□□□ -1.04
SPG11-217ENST00000559511 HLA-DMBP28068 263 aa8.56□□□□□ -1.04
SPG11-217ENST00000559511 CLEC19AQ6UXS0 136 aa8.56□□□□□ -1.04
SPG11-217ENST00000559511 FBN2P35556 2912 aa8.56□□□□□ -1.04
SPG11-217ENST00000559511 CLPSL1A2RUU4 121 aa8.56□□□□□ -1.04
SPG11-217ENST00000559511 HAX1O00165 279 aa8.56□□□□□ -1.04
SPG11-217ENST00000559511 CHEK1O14757 476 aa8.56□□□□□ -1.04
SPG11-217ENST00000559511 IGHV4-38-2P0DP08 117 aa8.56□□□□□ -1.04
SPG11-217ENST00000559511 CSN1S1P47710 185 aa8.56□□□□□ -1.04
SPG11-217ENST00000559511 FOXA3P55318 350 aaPredicted RBP8.56□□□□□ -1.04
SPG11-217ENST00000559511 MSMBP08118 114 aa8.55□□□□□ -1.04
SPG11-217ENST00000559511 DSCR9P59020 149 aa8.55□□□□□ -1.04
SPG11-217ENST00000559511 ANKRD39Q53RE8 183 aa8.55□□□□□ -1.04
SPG11-217ENST00000559511 RNASEKQ6P5S7 137 aaKnown RBP8.55□□□□□ -1.04
SPG11-217ENST00000559511 URB1-AS1Q96HZ7 61 aa8.55□□□□□ -1.04
SPG11-217ENST00000559511 LINC00527Q9UJ94 153 aa8.55□□□□□ -1.04
SPG11-217ENST00000559511 MOB4Q9Y3A3 225 aa8.55□□□□□ -1.04
SPG11-217ENST00000559511 IGHV3-66A0A0C4DH42 116 aa8.54□□□□□ -1.04
SPG11-217ENST00000559511 SERTM2A0A1B0GWG4 89 aa8.54□□□□□ -1.04
SPG11-217ENST00000559511 PRSS47A8MTI9 375 aa8.54□□□□□ -1.04
SPG11-217ENST00000559511 M0QZ24 198 aa8.54□□□□□ -1.04
SPG11-217ENST00000559511 BUB3O43684 328 aa8.54□□□□□ -1.04
SPG11-217ENST00000559511 ARMS2P0C7Q2 107 aa8.54□□□□□ -1.04
SPG11-217ENST00000559511 C3orf79P0CE67 100 aa8.54□□□□□ -1.04
SPG11-217ENST00000559511 C19orf54Q5BKX5 351 aa8.54□□□□□ -1.04
SPG11-217ENST00000559511 Q8TAT8 98 aa8.54□□□□□ -1.04
SPG11-217ENST00000559511 CR1P17927 2039 aa8.54□□□□□ -1.04
SPG11-217ENST00000559511 LOC102724200A0A096LPH7 203 aaPredicted RBP8.54□□□□□ -1.04
SPG11-217ENST00000559511 HSBP1O75506 76 aa8.54□□□□□ -1.04
SPG11-217ENST00000559511 CT45A10P0DMU9 189 aa8.54□□□□□ -1.04
SPG11-217ENST00000559511 RELQ04864 619 aaPredicted RBP8.54□□□□□ -1.04
SPG11-217ENST00000559511 EEF1AKMT3Q96AZ1 226 aa8.54□□□□□ -1.04
SPG11-217ENST00000559511 VGLL1Q99990 258 aa8.54□□□□□ -1.04
SPG11-217ENST00000559511 PAM16Q9Y3D7 125 aa8.54□□□□□ -1.04
SPG11-217ENST00000559511 IGHV3OR16-13A0A075B7E8 117 aa8.53□□□□□ -1.04
SPG11-217ENST00000559511 IGHV3-74A0A0B4J1X5 117 aa8.53□□□□□ -1.04
SPG11-217ENST00000559511 TRAV41A0A0B4J266 112 aa8.53□□□□□ -1.04
SPG11-217ENST00000559511 A0A1B0GUT8 65 aa8.53□□□□□ -1.04
SPG11-217ENST00000559511 SH2D1AO60880 128 aa8.53□□□□□ -1.04
SPG11-217ENST00000559511 PRR25Q96S07 402 aa8.53□□□□□ -1.04
SPG11-217ENST00000559511 MEGF9Q9H1U4 602 aa8.53□□□□□ -1.04
SPG11-217ENST00000559511 CENPEQ02224 2701 aa8.53□□□□□ -1.04
SPG11-217ENST00000559511 TRBV7-1A0A0A6YYK4 115 aa8.53□□□□□ -1.04
SPG11-217ENST00000559511 B4DSR2 109 aa8.53□□□□□ -1.04
SPG11-217ENST00000559511 SLC25A16P16260 332 aa8.53□□□□□ -1.04
SPG11-217ENST00000559511 COX8CQ7Z4L0 72 aa8.53□□□□□ -1.04
SPG11-217ENST00000559511 VAMP8Q9BV40 100 aa8.53□□□□□ -1.04
SPG11-217ENST00000559511 TPPP3Q9BW30 176 aa8.53□□□□□ -1.04
SPG11-217ENST00000559511 POLQO75417 2590 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 A0A087X0K7 114 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 TMSB15BA0A087X1C1 80 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 A0A096LNT2 108 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 IGHV3-49A0A0A0MS15 119 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 FAM181BA6NEQ2 426 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 M0R2Z0 102 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 ZNF207O43670 478 aaKnown RBP8.52□□□□□ -1.05
SPG11-217ENST00000559511 AVPP01185 164 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 S100A7P31151 101 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 ZNF80P51504 273 aaPredicted RBP8.52□□□□□ -1.05
SPG11-217ENST00000559511 KRTAP10-9P60411 292 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 FAM162BQ5T6X4 162 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 LCN12Q6JVE5 192 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 RNF182Q8N6D2 247 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 BORCS7Q96B45 105 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 C20orf144Q9BQM9 153 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 NDFIP1Q9BT67 221 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 HIF1ANQ9NWT6 349 aa8.52□□□□□ -1.05
SPG11-217ENST00000559511 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.51□□□□□ -1.05
SPG11-217ENST00000559511 PRAC2D3DTV9 90 aa8.51□□□□□ -1.05
SPG11-217ENST00000559511 CRIP2P52943 208 aaPredicted RBP8.51□□□□□ -1.05
SPG11-217ENST00000559511 ATP5G2Q06055 141 aa8.51□□□□□ -1.05
SPG11-217ENST00000559511 RIGQ13278 110 aa8.51□□□□□ -1.05
SPG11-217ENST00000559511 PMCHL1Q16048 86 aa8.51□□□□□ -1.05
SPG11-217ENST00000559511 LY6EQ16553 131 aa8.51□□□□□ -1.05
SPG11-217ENST00000559511 SAPCD1Q5SSQ6 148 aa8.51□□□□□ -1.05
SPG11-217ENST00000559511 GATD1Q8NB37 220 aa8.51□□□□□ -1.05
SPG11-217ENST00000559511 TMEM189A5PLL7 270 aa8.51□□□□□ -1.05
SPG11-217ENST00000559511 EREGO14944 169 aa8.51□□□□□ -1.05
SPG11-217ENST00000559511 RAB9AP51151 201 aa8.51□□□□□ -1.05
SPG11-217ENST00000559511 EBLN2Q6P2I7 272 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms