RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 DCANP1Q8TF63 244 aa4.4□□□□□ -1.7
CTDSPL2-206ENST00000559175 LINC00527Q9UJ94 153 aa4.4□□□□□ -1.7
CTDSPL2-206ENST00000559175 ZFP92A6NM28 416 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 COX7A2P2O60397 106 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 SPRNQ5BIV9 151 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 GTSF1Q8WW33 167 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 SDF2L1Q9HCN8 221 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 MOB4Q9Y3A3 225 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 BRCA2P51587 3418 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 LOC107986453A0A1B0GWG9 222 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 OR1I1O60431 355 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 GYPBP06028 91 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 CST6Q15828 149 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 APCDD1LQ8NCL9 501 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 FAM57AQ8TBR7 257 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 ZNF799Q96GE5 643 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 SCRT1Q9BWW7 348 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 XCL2Q9UBD3 114 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 EPDR1Q9UM22 224 aa4.4□□□□□ -1.71
CTDSPL2-206ENST00000559175 GTF3C1Q12789 2109 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 LGALS9O00182 355 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 CST7O76096 145 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 TRBV12-3P01733 135 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 SCGB1C2P0DMR2 95 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 LGALS9BQ3B8N2 356 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 NOXRED1Q6NXP6 359 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 ZNF322Q6U7Q0 402 aaPredicted RBP4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 NFE4Q86UQ8 179 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 PRR15Q8IV56 129 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 WFDC5Q8TCV5 224 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 PCSK5Q92824 1860 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 UBE2L6O14933 153 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 UBE2L3P68036 154 aaKnown RBP4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 ZNF678Q5SXM1 525 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 MIC13Q5XKP0 118 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 Q6ZS92 163 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 C6orf201Q7Z4U5 140 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 GABARAPL1Q9H0R8 117 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 SERP1Q9Y6X1 66 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 PRUNE2Q8WUY3 3088 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 TRBV19A0A075B6N1 114 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 TMSB15BA0A087X1C1 80 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 TRAV41A0A0B4J266 112 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 PGPA6NDG6 321 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 INS-IGF2F8WCM5 200 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 ASAH2BP0C7U1 165 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 PTHLHP12272 177 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 C1orf140Q5VVS0 124 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 NUP35Q8NFH5 326 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 GNB4Q9HAV0 340 aa4.39□□□□□ -1.71
CTDSPL2-206ENST00000559175 H3BVH4 76 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 IL3RAP26951 378 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 CXCL5P42830 114 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 SS18Q15532 418 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 ZNF584Q8IVC4 421 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 SMIM7Q9BQ49 75 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 PDE4DIPQ5VU43 2346 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 IGKV1-27A0A075B6S5 117 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 IGHV4-61A0A0C4DH41 118 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 IGHV4-59P01825 116 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 VN1R4Q7Z5H5 301 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 OR10AC1Q8NH08 325 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 DKK2Q9UBU2 259 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 NINQ8N4C6 2090 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 ZNF138P52744 262 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 SLURP1P55000 103 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 PRR3P79522 188 aaKnown RBP4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 RUSC1-AS1Q66K80 236 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 C2orf50Q96LR7 162 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 SCRT2Q9NQ03 307 aa4.38□□□□□ -1.71
CTDSPL2-206ENST00000559175 K7ESM1 405 aa4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 IGHG1P01857 330 aa4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 PCBD1P61457 104 aa4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 RPS11P62280 158 aaKnown RBP eCLIP4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 MRPS21P82921 87 aaKnown RBP4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 FAM19A2Q8N3H0 131 aa4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 DPH3P1Q9H4G8 78 aa4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 NUMA1Q14980 2115 aa4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 TRBV20OR9-2A0A075B6H5 130 aa4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 TRAV9-1A0A075B6T8 112 aa4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 A8MUN3 132 aa4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 FXYD1O00168 92 aa4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 UPK2O00526 184 aa4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 COX8AP10176 69 aa4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 DOCK7Q96N67 2140 aa4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 MGST2Q99735 147 aa4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 ZNF286AQ9HBT8 521 aa4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 MED12LQ86YW9 2145 aa4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 TDRD6O60522 2096 aaKnown RBP4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 GOLGA4Q13439 2230 aaKnown RBP4.37□□□□□ -1.71
CTDSPL2-206ENST00000559175 PIRTP0C851 137 aa4.36□□□□□ -1.71
CTDSPL2-206ENST00000559175 SPINT3P49223 89 aa4.36□□□□□ -1.71
CTDSPL2-206ENST00000559175 RBM3P98179 157 aaKnown RBP4.36□□□□□ -1.71
CTDSPL2-206ENST00000559175 KIAA0087Q14695 138 aa4.36□□□□□ -1.71
CTDSPL2-206ENST00000559175 ICAM4Q14773 271 aa4.36□□□□□ -1.71
CTDSPL2-206ENST00000559175 ZNF56Q15929 161 aa4.36□□□□□ -1.71
CTDSPL2-206ENST00000559175 C18orf12Q96KH6 178 aa4.36□□□□□ -1.71
CTDSPL2-206ENST00000559175 NHP2Q9NX24 153 aaKnown RBP4.36□□□□□ -1.71
CTDSPL2-206ENST00000559175 CHD7Q9P2D1 2997 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms